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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00013185 ID=TCONS_00013185|Name=TCONS_00013185|organism=Clytia hemisphaerica|type=transcript|length=1794bp
AAGACCTTTCAAGACAACAAAGTAATAAAAGCCAAATAATTATTCAGTTT
AATGTTTATTGCTgattttaaagtaaatttgacaaaaagttatgtccgca
accaacaaggtttcgttttctaattttttattgatcaactgaaatatagc
aaacttttgttttttttgaaagcttataatgagtccttcaaatctagaat
gaaGTTACCTGATCATagccagttttcttttcatgaagtcaaactttatg
ggaatattttttagtattttagattttcttctggaaaaagtgtcagaatt
tgaaaaatatgtcatACTGGACTGTAAAAATTGCTTTTCGATGCAGCTTA
ATATATTAGCCATGGACTGAAATCTAAGACAAAGATTAGATTTatgcatt
ttattttttaatttttttattttatatcaaatgaaaactacaaagagttt
tttgccaaatttgtctgATTATAACTAGTCTAGGTCGTATTTCTGAACCA
AGCCAGTTTGATTAAGCCCTGATatttatgttttctgaaaattgaagtcg
ttaataaaaagattatccaggaataaaagtgaaattcaaaactttatttt
ttccaaatttgttcGCCTATTTGGGTGACATTACCAGATTCATGCTCATA
ACTCAAATTTTAAATCTCTATTCTAAAAGACTTCTGGGTTCAagtaaaaa
acacaaattttacTGCAAtagctttttttttacttagaaCTCTCTATTCT
TAAGTTTTCTCAAAAGGCAACGAGAGATCTATCAAGAGTAAGTCATATTG
TTGCAAGTAAGTCTCTGTGTGATTCTAATAAGCACCACCTTTAGATGCAG
TGCTCTTTAGTTAACTTTCAAGgaaaaaatgtaataaatatTATGGGGAT
GCTAAGGAAAATAGTTAATCTAggagtttcatttttatttatttatttat
agtaatatatttcccaggtctatcgacctTATCCATTTTCGGTGGAGACG
ACGCTTTTCTTTGATGGTTTTTCAAAGTTCTGTAGAAATCGCAAATTcct
tctttcttttataagagttTTCTTCTTTTGTGCATGGTACGTATTGGTTT
CTAAGGTCAAGAAGTTTATCTCGTAACATATTCCAGCACTCATTAACATG
TGTGTCGTCTGTCCTGCTAATGAAATCAGTAACCcattcagaattttcaa
gatctCCTTTCATATCTTCGTAATTTGCTTTATTATAATTGTATTTGACA
CCTACAGCCTCAGTTTCAAAATAACATTCAAATGTGAATGAGAGAACACT
ATGATCGCTTTTATTACCTCGTAGTTTTCTGCTTTCACTATAATCTAAGG
TGCTTCTGCTGAATGTGTCAATTAGTCAATTTACACATTTTTTGGGCCTG
TGATTTCAATAATCTTTGTAAAGTAACagacaaagattttgtatttaTAA
TGATGTTTTTTCTTAAGAGAATAAATTATTTGTCGTAACTAACTTGTGAT
ATTCCAAGCAATTTTATTTTACCTGAAAATTAGACGTGTTATGAGATAGC
TTTTTATGGTCTAGCTTTCAAACATTCTGAATGACCAGTTAGAGTTTACC
AAAGTTTGTTATATGTCTGGCTGATAAaaccatagtgtgcagagggttCT
GGACCCCTATCGTTTACTCCATCCCTCTATATATGGAATCCATTATTTTT
AACTTgagtattttgtgttttttgtgTCTACTGTGAATTTTAGTTTTCTG
AAAAACAATTCACTAAAAATCTATATTGATACACCCTTTCTCAC Run BLAST on NCBI transcript from alignment at sc0000162:210872..212665 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00013185 ID=TCONS_00013185|Name=TCONS_00013185|organism=Clytia hemisphaerica|type=transcript|length=1794bp|location=Sequence derived from alignment at sc0000162:210872..212665 (Clytia hemisphaerica)
GTGAGAAAGGGTGTATCAATATAGATTTTTAGTGAATTGTTTTTCAGAAA
ACTAAAATTCACAGTAGAcacaaaaaacacaaaatactcAAGTTAAAAAT
AATGGATTCCATATATAGAGGGATGGAGTAAACGATAGGGGTCCAGaacc
ctctgcacactatggttTTATCAGCCAGACATATAACAAACTTTGGTAAA
CTCTAACTGGTCATTCAGAATGTTTGAAAGCTAGACCATAAAAAGCTATC
TCATAACACGTCTAATTTTCAGGTAAAATAAAATTGCTTGGAATATCACA
AGTTAGTTACGACAAATAATTTATTCTCTTAAGAAAAAACATCATTAtaa
atacaaaatctttgtctGTTACTTTACAAAGATTATTGAAATCACAGGCC
CAAAAAATGTGTAAATTGACTAATTGACACATTCAGCAGAAGCACCTTAG
ATTATAGTGAAAGCAGAAAACTACGAGGTAATAAAAGCGATCATAGTGTT
CTCTCATTCACATTTGAATGTTATTTTGAAACTGAGGCTGTAGGTGTCAA
ATACAATTATAATAAAGCAAATTACGAAGATATGAAAGGagatcttgaaa
attctgaatgGGTTACTGATTTCATTAGCAGGACAGACGACACACATGTT
AATGAGTGCTGGAATATGTTACGAGATAAACTTCTTGACCTTAGAAACCA
ATACGTACCATGCACAAAAGAAGAAaactcttataaaagaaagaaggAAT
TTGCGATTTCTACAGAACTTTGAAAAACCATCAAAGAAAAGCGTCGTCTC
CACCGAAAATGGATAaggtcgatagacctgggaaatatattactataaat
aaataaataaaaatgaaactccTAGATTAACTATTTTCCTTAGCATCCCC
ATAatatttattacattttttcCTTGAAAGTTAACTAAAGAGCACTGCAT
CTAAAGGTGGTGCTTATTAGAATCACACAGAGACTTACTTGCAACAATAT
GACTTACTCTTGATAGATCTCTCGTTGCCTTTTGAGAAAACTTAAGAATA
GAGAGttctaagtaaaaaaaaagctaTTGCAgtaaaatttgtgtttttta
ctTGAACCCAGAAGTCTTTTAGAATAGAGATTTAAAATTTGAGTTATGAG
CATGAATCTGGTAATGTCACCCAAATAGGCgaacaaatttggaaaaaata
aagttttgaatttcacttttattcctggataatctttttattaacgactt
caattttcagaaaacataaatATCAGGGCTTAATCAAACTGGCTTGGTTC
AGAAATACGACCTAGACTAGTTATAATcagacaaatttggcaaaaaactc
tttgtagttttcatttgatataaaataaaaaaattaaaaaataaaatgca
tAAATCTAATCTTTGTCTTAGATTTCAGTCCATGGCTAATATATTAAGCT
GCATCGAAAAGCAATTTTTACAGTCCAGTatgacatatttttcaaattct
gacactttttccagaagaaaatctaaaatactaaaaaatattcccataaa
gtttgacttcatgaaaagaaaactggctATGATCAGGTAACttcattcta
gatttgaaggactcattataagctttcaaaaaaaacaaaagtttgctata
tttcagttgatcaataaaaaattagaaaacgaaaccttgttggttgcgga
cataactttttgtcaaatttactttaaaatcAGCAATAAACATTAAACTG
AATAATTATTTGGCTTTTATTACTTTGTTGTCTTGAAAGGTCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00013185-exon-sc0000162-1491911889:210872..212665 | TCONS_00013185-exon-sc0000162-1491911889:210872..212665 | Clytia hemisphaerica | exon |
| TCONS_00013185-exon-sc0000162-1510915933:210872..212665 | TCONS_00013185-exon-sc0000162-1510915933:210872..212665 | Clytia hemisphaerica | exon |
| TCONS_00013185-exon-sc0000162-1575043694:210872..212665 | TCONS_00013185-exon-sc0000162-1575043694:210872..212665 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000162 | supercontig | sc0000162:210872..212665 . |
Blast
The following BLAST results are available for this feature:
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