XLOC_011965 (gene) - C. hemisphaerica

Overview
NameXLOC_011965
Unique NameXLOC_011965
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000385:220109..223643-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_011965 ID=XLOC_011965|Name=XLOC_011965|organism=Clytia hemisphaerica|type=gene|length=3535bp|location=Sequence derived from alignment at sc0000385:220109..223643- (Clytia hemisphaerica)
CGATGCACCACAGCAAAATATGCCGAATCCTAACCAGCTAGCCAAGTGTC
TCCAAGATTTGACCAACGAGTCTGCAGGTATTCACTCCAATGATGAATGC
CAAATGATTGAAGTGTTGCCGTCAGGTCAGCCCAGATTAACCATCTTAGA
GGACGTCTCTTCAATTAGGACACGACACAACATGGGGCTGGGTCCGCTTA
TGCTTATTGAGCAGATGAGAAACACTTGTAAGGCATCTACCGATATTGTA
CGACCAAGCCTGCGACGTTCACGATTAAAGGCGACAGATAAGTCGTTTTT
AAGGCCANAGTTTCCCCGATTTTACCTTCAATCGATATTTTTCCGCGATA
TAGATAATGTTTATGCTATATCTTTTCAACGACATAGTTCACTAGTCTAT
GCTTGATAATAATTGGCAATATAACGGTAAAATGCTCTAAAAATGGCATT
CTTAGGGTTCAATTGCCAATTTCCATGATGGTGGTATTCTTACCAAATTC
TTAATTTTGTGGTTAATTTCATCATGAATATTCTTACAAAGTATATCCTT
ATTCATAAAAACCTTACACCAGGCGTAAACGTCACAATTTCTATTCATTT
AATGAAAATATTAATTGACGTCAAATAAAAAAAACGTCAAAAATCATTAA
CGAAGGACGGTTGCATTTCAACACAATTTCAATTTGTTGGAAATATTTCA
CTAAAGCAGAAGCGCACGTAATTCATGATGTGGGAGGATCCGAAAAAGTT
CCTGAAAAAGAAGAACCCGCAACAAGGTGTTCGTCGTTATCGACGAGCGA
GTGAAAATCCAATGGAAGCACTTCAGATTGTGCTCAAACAATACCGAAAC
AGTCCTCCACAGTCAGAAGCAGATGGACATAACCTATCCAATAATGAGCA
GTCACCAGAATCATCACCCCAACGCCAAGCAAGTAACAATGGCTCAAATC
TTGATCAAAGCGATGCACCACAGCAAAATATGCCGAATCCTAACCAGCTA
GCCAAGTGTCTCCAAGATTTGACCAACGAGTCTGCAGGTATTCACTCCAA
TGTTGAATGCCAAATGATTGAAGTGTTGCCGTCAGGTCAGCCCAGATTAA
CCATCTTAGAGGACGTCTCTTCAATCCGGACACGCCACAACATGGGGCTG
GGTCCGCTCATGCTTATTGAGCAGATGAGAAACACTTGTAAACCATCTAC
CGATATTGTACGACCAAGCCTGCGACGTTCACGATTAAAGGCGACAGATA
AGTCGTTTTTAAGGCCATTGGCTTTAGAGGAGGGAGCAGAAAAGGGGAAA
CCACTCCGTCACAAGAAGGGAGATGTCCCATGGGGCGTCCGAATGAGGCG
TTGGCGCCCTTGCGATGATGGCGTCAGCCAAGATGAACGATCGATGGAAT
TACTTGAACACGTTGAGGAAGACAAATTTTATAAGATGACAGGATCATCT
AAAAGTGTTGAAAACACTAACTCTCATACCCATTCAGTCTTTCAAACAGA
TGAAGACACTTTTTCAATGCCACCTAAAGACCAAAAAATAGAAGATTCTC
CATCTCCACCACGGGGAGAGCAAACACCATCTATGGTGCTGGACACTGAA
GGTGTTCATCAAACAGTTAGCGAACAAGAACTATGTATTGGAGATTCCCT
GCTTGGGGCTGTAGGTTACGATCGACCAAAGCTCGATACTTCGTCACAGG
CAATTGAGGGAAGAAGTGAGCTCTTTAAAGGTGATTCACCATCAGCTAAC
ATCAAAGTTGCTTCTTTTGGCGATATAAACACATCACCAGAAGTACACAC
ACAAAGATTCTCAGCTCCGGTTCTAAACACCGTTCGTTATGACGATATCT
TGAGTCCTGAAGTATTTGAAAAGCACAACAAAGATGTTAAATTAAAACGA
AAACAGAGCAAGACCAAAGCTACGAGAGCCAATATGTCAGCAAGCAAAGA
ATCGTTCAAGAAAAAGTTACCATCAGATATGTTTATTGCTCACAAAGATG
AAACAGAATCTGCAGTATCATTGACGTGGCATTCCGGTAGAAGTTCATCC
GGCAACTTGACTTTGTCCAATAAGTCATTAAAGATTTCCGCAATTGAAGC
CGAAAAACAATCCATCTTTGAAGGAATAAAATCAAGAGGTTTATACGCCG
CTTACCAAGCATGCATGTCAGAATTCGAATTTGAGATGGATAAAGAAGTT
GATCAAGGACAAGCGAACGGCACCGAGGAGCCTGAAACCGAGAGAGAAAG
AGGTCCAGTGATTACATATGACCTCGAAAACGAAGTAGAAGAAGAAGAAG
GAGAGTATGTTGTGTCTCGTTGGGTTAGGAGCGAAGACGCCGTGACCGAA
CAATTGATTATCCCAGACACTCATTGGGTTAGGAACGAAGATTGCACCGA
GACCCAAACATCTGAGGTTCCAGTTGTTAATGAAGTGGAAGATATCCAAA
TCGTCAATCAAGAACAAGAAAGAAGCATCGATGAATCAAAACGTGAAAGT
TGTTCTATTGCACTATACAATGAGCGGTTGACAAAGGTATCATAAATTCT
TCATCAAAAACGTAAAATAACATTCACGTACAATTATAATGACAAGTTTC
TTTTTGTACAGAAGTCTAGTTTTGTATTTTAATATTAAGGAATTTCAGGA
TGTTTTGTCATCGATGACGATTTATCTCTAGTGATTTTCGAGAAAAGGCT
TACCCAGAAATTTTACGGTATCCTCGGTCAATCTAGGGTATTTCATTTTC
AAATTTTAGATCATGAAGGCCATTACGAAAGTTCATCAAGAGCAGTGCGG
TCATTTCACTGAATTAGATTGCGAACATCGTGTTGGCATGTCTCCCATCA
ATGACGTCATCAACGAAAATAGAAGGAGCACAGTTATGAGTAGAGGTAGG
ATATTTTAATTCAATTCTTGGACTATCCAACAAGATTACTAATGTTCAGA
ATTAAAAAAAAGGCAATAAAGTATGTTATAAATATCTTTGGTAAAAATGG
GATATTGGAAGTACTAAAAGACATGAAAATATTTCCTGGAAAGCTTCTTG
GAACAAAAATTCCTGGAAAAAAGTTTCAAGCACTGGTACTATAGGCTTGA
TAGATAACATGACTGTTAATTTTCAAATCGATTTTTCTTACAGTTTCAGC
TTTTATTCAACGACGAACAAAGCTTCGAAGAATGCGAAACAGAGTAAAGA
GAGTGTGGAAAGCAATAAAGAAACCTGCTGTATGGTGCATTGGTGGTAGA
AAAACCAATACCAACCACAATGTTGCAGCCCAAGTATTCCAAGTTGAATT
TGTTGATGATGACCAAATGTAAAAAATGTTTGTTTGATAATTATTTTGAG
TGCCAAAATCCTACTTCCATTATAATCAAATATAAACCATCCTCTCATCT
AATCTGAGAAAGGCAGCTTTGGAAATTGTTGGTAGAAAAAAAAAAGTATT
GAGAAGTTCGGTAAAAGTGTGGTGATTGACTTTACGATCGGGTACCTTTC
GCTGGTTGGTTGGATTATTATTTTTGACACTCCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00021373TCONS_00021373Clytia hemisphaericatranscript
TCONS_00021372TCONS_00021372Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00021373-proteinTCONS_00021373-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000385supercontigsc0000385:220109..223643 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.02	0.03	0.04	0.04	0.15	0.12	0.1	0.16	0.05	0.05	0.06	0.05	0.07	0.02	0	0.02	0	0.03	0.04	0	0	0.03	0.02	0.02	0.18	0.31	0.03	0.03	0.02	0.04