XLOC_012399 (gene) - C. hemisphaerica

Overview
NameXLOC_012399
Unique NameXLOC_012399
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000405:40498..49614-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012399 ID=XLOC_012399|Name=XLOC_012399|organism=Clytia hemisphaerica|type=gene|length=9117bp|location=Sequence derived from alignment at sc0000405:40498..49614- (Clytia hemisphaerica)
CAATATTATGACTCTTGCTTGAACATAAAGATAAGGAAAAACTGACACAT AGTTTTAGAGTTATAAAGAAATCACAAATCCTTCCATGCCTCTAAAAAAG GGAGGCATTTCTTAAAATTATATGATGGTTAGATTTTATCTTCATTGAAG ATTTCTTTCATAATGGAGGTAGACAAAGACCAACTACTGGATGAAATATC GTTGAATAAAATGACGTTCAGAGTCAATGATCAAGGTAAGAAGATTGGAT TTCGAATTCTGAATTTTAATTCCAGTGGCACACTTTCTATGTATGTACAC GTTTTTTATAAGAACAAACTACATACGTAAGAACATAATTCTTCGATGGA AAAATAATTAAAGTCTATAAGTCTATAAGTGTGCACTCTTTTTTCATTAA CCTATAACTTTTGAAGGAATTCTTCAATCTTTATAAATTTGGTATCATTG GAAAGATATTAGTGAGTGGAACAATTTGAAATAAAAAAAACTTTAAAAAA AGATTATAAAAATGAAGATGAAAATGAAGAAGAAAAAAATGAAGATCTTG TAGAAAAGTGCTATAACTATCATTTTCATTGGAGTGAATCCTTAATCATC GAACATCATCACTGTGAAAAAAATTCTCAAAAATAATCATTCAGTCAAAA GATATCAAACAAAGTTATAAGCTGATTGACGTCTAAAAACGCTGTTTTCN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTGCTGTTTT TTGGGGTCAATCACTTATTAACTTTGTATCATAACTTTATATTGAATAAA TATTTTAATGAAATTTCTTCACAGTGATGATCTGCTAAGATCAAAGAATC TCTCAAGTGAAAATGAAAGTTATAGCACTTTTCTACAAGATCTTCATTTT TTTCTTTTTCATTTTCATCTTCATTTTTAGAATTTTTTTAAAGATTTTTT TATTTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNTTATTTCAAATTGTTCCACTCATTAATATCTTTCCAATGATACCAA ATTTATAAAGATTGAAGAATTCCTTCAAAAGTTATAAGTAAAAGAAAAAA GAGTACACACTTATCGTGAATAGACTTTAAGAACAATTTAGAACAATTTA AGGCTCAATGGACTCCAATTTTTTAAGAAATTGCACAAAAAAATACTCAC AAAATGGTCAAATTAAGAACACCTTAATTAAAAAAAAAATTTTGAACTTA AAATTAGAACACCTGCTCAAAAGTTTTCGATATTCTTAAAAAGTAATCGT AGGTTTTATTTTTCATCATTAAATTTATCTGGCCCAAGAAATTTTTCAAG TTTTGCTAATGGGATTTGATATATCCTATGACTTCAAATTCATTGTCTTA TTTTACCAAAAGGTATTGCCGAGTATTCTGATGACGACTCTGAAAATGAT GAAGCAAGTCTTGCCAGTTATAACATGCTTGATTATTTCGATGGCGGTGA TGAATTACCACCCTCGAGAGAGAGCGGCTCGAAATCGAGATCATCAAAAT TGAATCGTATTGAAGACTTACCGTTTTACCACCCTGGCGTAACGAGAAAC ACATGTGAGGCGTTGTTATTAGCCAATGGGATTGAAGGAAGTTATTTGGT TCGACCAAGTGGCAATGAGAAGGACCGATTTACTGTTTCAGTAAGGTACA ATTCTTAACTTTTTTTATTTAACACACCCCTGTCTCACAGCCCCGGTGGA ACTTCTTTACAATGGAGATAAAAATTCTTTTCCGAGAATTGGCGAAACCA ATTTAATTTGTTGTTCTACGGGCAGATCGTTAGCAAAATATGAGTCGGTT GGTCGGTAAAATAAAACTAAGATTAATCAAGGAAAGTAATTAGGCTTTAA TTAATATTTTCAAAAAATCTTGGTCGAAAATTCATCATTCATCTTTGAAG GAGTTTGTAATAAAATCTTTCGTGCATAGAATTCATGATTTTAGATTCTT TTCAACTTTTTTAAGTGTAAAATTTTTAAATGACTAGTATTAGAAATTTG TGGCATAGGAAATTCAATATTATTAATTTTTCGTTTGCAGTAAATGCTGG GTCGGTAGCGCCCGTAGAACAGCAAATTAAATTGGTCTCGCCCTAGGTAT AAAGTTCCTTTTCCCCACCGGGACAAAATGTTATCCAAACTTTCTAGTAA GGCGGGGGTTCAACCGGTTCTGTATCAGAGGGGTGTTTTAACCTTTAATA TACCTTTATAACAAACTCGTGTCTCAATTTATATAGGTTACCATAATTAT AGTATCTCACCAATTTTATAACTAGAAATGGAAAGTATTGTTACAACTCA AATACTAGTCATTTATCAGACTAGACTTTCATTATTCGTTTGTTCGTTCA TTCAGCTAGCCTAGTTCGCAAGCTCTTTCGCCATAATTATCCCTTTTCTT TCTCTATTAATCCCGATAATTCCGGTTTCATTTCAACTGGGATTAAAATC GGGATTATCTATCACTGTTTAGACGTTGTCAATCTATGGATAAGCTTTTA AAACAAAACTTGTATTTTTCTTCGTCAAAAGATTTATTTTCAAACAAAAT CCAAACGTGAAAACTTGAATCTCAGTTATAAAAATAAAGAAAGCCCGAGA AAAAAACTGTATACTATGCAAAGTTGTGACGATATGGTCATTTTTTATAG TAAAAAATAATAGTTCTGAGACTTATTGATTGATTTTACGTCACTTACAA CCAATCAGCTGTTGGGTCCGTGAGTATTGTCAGAAGACATGCATATCATG AATTGACTCTACGTAAAACGGGCTTGGTTCAAGTCTGCTCGGGTCTCCAC TGACGTGCGCGCGTCACAGATAAAGATATTTGACGTCATTCGAATCTGGT TAACTCGTACCCAGGGTTTCCTATGGTGCAAGGGTTTATTGGTTTAATTG GTTTAAGTGCGGCTGAAAATTGTTAAAACATTGAACATTACTTTGGCATT TAAGTTTTCTATCTTGATTTAGAATAATTATGCGAGATCTTGTTTTTTAG ATAGTTTGAAAAATCAAGAAATATATTTTCAGGAATATTTCAAGTTAAAT AGTTTTACACCTTTAACGAAAGATGTATTTGAAATGCATCATGGTCTATA GTTAGTGAATTATGGGAAATTTGTTCAGTGCATTGCATCAACGAAGAAAA TATACAATTACAGAAGATGATGAAGACTTCACAGATGTCTCTGATGAATT ACTGTACTAATATTTTTTTCAAGTTTTTTGTATATTTTGATGTCAATGTC TGAGTCTAAATGAATGATACCTCTCTGAATTTTTACGAAAAATTCGTGGA CTTTCTCTAGCAAACTTTCAAGGGATCTTTTTTGGATTCTTAGTCCATTA CAAAGGGTCCCGTACAAAATTCTGCTTCCGCCACAATAGATTCTATTATG GGAACTGTTTATGGGACACTTTGTATATCAAAAGGAGAGAGATTTTTCTC ATATGAGGTTCAGTCAGAAACACAGTATTTCTACTGAAAGTTTAAAATGG CGTACTATAACGTATTCTAGTATAACTTAGCATAGAGCCTATCTGAGCAA TCTGAGATTGTCTCTACAGCAATAGATTTTGAAATTTCCGTTTACAGACA AACTATAACGTTTTTCTTACTCCTTTTTACATACAGGTGTTCGAATTCTA TCAAACATTACGCATTAGACATTAATCATTTTAAACATACGTACGCATTC GGTATCGCACAATTTGATTCAATCGATGAATTATCCGAACATTTTAAATG TATGCCAGTGCTTGGCAGTGAATCAGGTTAGCTTTTACAGTTTTTTTTAC ATGTACGTAGAATTTAAAAACCCTTTAACCCCCCCGGTACGTATTACGGT ACTTTATACAGCACTTAATCTATTAGAAGTTTTTTTTCGAGAACACAGAG AAGAAAATTATCACGAATTCAGCAAATGCTAACTTCAAAGTGAATTAATT CTTTGATGATAATTGTTGTTCAAAATATACTTTGTACTTTAGCCTATATG TTAACAAACTTAAGATCGTTGAAACTGTCTTTCATCTGATTGGTTGATGT CATTTCTTAGAAGCAGACACTTAAAAGACTTTCAAATGAATGAATCAATG ATAACACTTCATCATTTTTTTTCTATTCAAGTCTGTCAAATCACTTTTGT TTTTCTAGGAACTTCGGTGACACTCAGACACCCATATAAACACGACATTC CAGAACCAACTCAATATGAACACGTAGTCAGACACGCTGAACTTGGGAAG CAAACATCATTCAATCAAGACATGGCGAAACCATCACCAGATCTACATGT AAGTTTACCATTGAACTTACTACGTAATGAACTAATCAAGTCTTTTATTT AATGCCTGAAAAAATCAATGCAACAATTTATTTAACGGTCGTGTGCAGGA TTTTTGAAAATTACTTTTTATCAATTTTTAAGATGTGTACCTGATAAGGT CGACTTTTGGTTATTTTGGACAATTTTTAGAATGGAAATTAGAAAATGTT TCAATTTTTCGTCTACATTTCGTCACTTTTCCTACTTTTCGGGCTGAAAA TGGAATTTTTTTTCTCGATTTTTCGTAACAATTTTTCCGAACATTCATAT CTGACAGGGTCATCTTCTCAAACTCCCCCCCCCCCATACTGGGATTTCGT CACACTGAGACACATAAAATATACAGTTTTTTCTATTTCTCACTTTAGAT AGCTTCAAAAGAAGGTTATCTCATCAAGAGAGGTGCAATTCATAAAGTAA GCATTCTGAACAGAGGGTGTTACAGACACATTCATACCTCGGCCCCACTT GAAAATGTGTCCAAAATTACGTTCCCGATGGGAAAGATACCCTATAATTT CAGCCCCACTGGGAGTTCATTCCTTTAAGAAAGTGACGTGCTTACTGCAC GGAGTCTGATGTAAAAACTGATCTTTCGATATAAGATTACGGGCTCTATA CAAAATGAATAAAATGCAGACCAAAGTGGTCTTTATAATATATCACAATC CCCATTCGAAATTCAATACGTAAGAAATTGCACTTCAAACTATCCCAACT GGATGTTTTTAACTTGGAACAATATAATTTCTATGCCTGCTGTAGAGAAA AATTTCACTGAGGTTGTGAGACAGGGGTTTATCTGAAACTCATCTGGCAA CGATTGTGAATAAACTATTTCTTTTGAATAATTTTTTCCGAATTTCTCTG TAGTTCGAACTATAATAATGACCTACTTAGATTTTAAAAATTTATTGCAA AAGACACACAAAGCATTTTTAAATTTTAAGAAAAGTTTTACACTCTTGAT ATCATTTTTAAAATTCATTGCTTATTTTCTTAGAACTGGAAGAAAAGATG GTTTGTCCTGCAAAAGAACTTATTAAAATATTACAAAGAAAAAGAGGTTA GTCCTCCCTTTGTTGTGCCTAGACCTTTAGTTCGTCCAACGAACATTGTG CCAAATCTATTTTCTGTTTAAGCAGTCATTTGAATCCATGTCATTAAAAT GACACGTGTAATGCGTAAGATAGTGGTCAATAAAGTCGTTGCATAAAGGC CAGTCTCCACTTTCGCGCGAAGTGAGCGAAAATTTTTAACGTTTTTGTAA GGTTATTGGTCGGTTGAAAAATGAAGCAATTCCATTGGCCAAAATTGACG TAACGGTTGAAAAAAGTTGAGCTTTCTGCAACTTTTTTTTGTTCACGCGA AACTCTTTTATGACGTAATCTTTTCTTTAGGCAAAAAAGGTTGAGAAAAA AACTGTCGCCCATTTCGCACGAAAGTGGATACCGGCCTTTAGAATTGCAA TATGACGTCACTTAGTTTAAGGAACTTAGAATGCCCATCGATATTAATCA CATGCCCAAAATAAAATGGAATTCAATTTTTTCACCAGTATTTCCTGACC AGGTAGATATTCAATGACTTGAGTTCTTGGCCTCACCGTATATGAAAATC TTTGCAATTTGTCTGAAATTTGGTGGAGTTTTCCTTGGATTTTCCTTGGA TTTTCTTGGATTATTTGAAACGTTTTTTAAGAAAGTCAAGCTAAAATTTC ATTATTTTTAATTTCAGGAATCGACTCCAATTAAGACCATCGATTTAGTT GACGCAATGCATGCAGTGGAAGACTTCTGTGATGGACGAAATAATTGCTT CCGATTAGCCATGCCAACAAGGATATTTTATTTTGTGGCTAGTTCACCTT CAGAAGCTAAATCATGGATTGAACTTTTACAGTGGAAAATTGTGAGTGTT GATATTTTTTTCAATAATGCATTGTCGTTTGAGCTATAATAATTAGTCTG GTCTAAGGGGTCGATATGACACAGTTGAGTGGAGTGACACACAGGAGTTG GGCTAGTAAGTGGGCTAGTAACCACATGCTTTATAAACTGAATACTGCTC AAAGAGATCAAAACTAGTGCAAAACTTCAAAATAACTTCCTTAACATCCA TATTAAGTTTTTTTTAATATTGAAGCAACGTTGCGTACCAGCTTGTAACT CCCTATGTTACCTAGCAATTATATTGATTAAGAACTCTATTTTTTTTACT ACCTAATCGGCCCTTTTGACACCAGCCTTATTACGCTGGCGTAATAAGGG CTAGCGTAAAAAGGGTCGATAAGGTATAAACCTGGGAAAAGGTTTGTTCG TTAGTTCTTCTTTAATTCGCTATTTTATCATTGGTTATGAATTTGTGTTG GGTTAGAGGAACCAAGCTGAAACAGAACGTCAAATCTTAATTTTTTGGTT TTGAATTACTGTGACTTTAGTTTTAGACAAATATTGTCTATATATAATTT GCTTAAACATCCGTTTTTTTTCTTAGGAATATTACCAAGAAAGGAAAACG AATCAATCGAAGACTCGTTTAAAGTAAGTGGGCCATACTGTTACTTTAGT AAGGCTTGCAACACAACAATTGTTTGGTCACCTAGTCACATCAATATTTA TCTGCATGTACTAAAAAGTTTAAGTGGCACGTGAAAATATTTTGAATAAA ATGAAAGACCTAGGGATGAGCTTTAAACTAGTGGGTTCCCAGCTGGCACA CAACGTTGTTTTAACGTTCATCTAACATTATATGGACGTTGTGAACATTA GATTAACGTTGAAACGACGTTGTGTGCAGGCTGGTTTGGGAATTTTTACA GCTTAGTATTCCGGATAAGATTCTTAAAATTATAATATTTTGCATAAAGC AGATTTAGCAGATTTCAGTAAAGTTTTCCTATGGGAAGGAAATGAAGGTC TGCACCCTGTTTTTTGACAATTTTCTTGTCTTTAGAAAGTTCTACCCATA AGAGAAAGAGTGAAGTTTCCTTTTCTGCTTTGCACTGCACTTTCAAACTG CAACTGTATTGCACACAAAACATATCACAAAATGTCATCAAAAATTATGC ATGCGTATGCGTCAACCTGCAAATGTACCTAAACCGCTATACTTTTTCAA GAATATGATACCTCATCCATAGCATTTTTTACTTAGAACCACACTCAAGT ATACCGTGAGTATCACAGTGCATGAATTTTACACTGTGACGACAGATAAA TTTAAGAGAAAGCTAAACTGTGACGACAGATAAATTTAAGAAAAAGCTAA ACTGTGAAGACAGATAAACTTAAGAGAAAGCTAAACTGTGACGACAGATA AACTTAAGAGAAAGCTAAACTGTGACGACAGATAAATTTAAGAGAAAGCT AAACTGTGACGACAAATAAATTTAAGAGAAAGCTAAACTGTGACAACAGA TAAATTTAAGAGAAAGCTAAACTGTGACAACAGATAATTTTAAGAGAAAG CTAAACTGTGACGACAGATAAATTTAAGAGAAAGCTACACTGTGACGACA GATAAATTTAAGAGAAAGCTAAACTGTGACAACAGATAATTTTAAGAGAA AGCTAAACTGTGACGACAGATAAATTTAAGAGAAAGCTACACTGTGACGA CAGATAAATTTAAGAGAAAGCTAAACTGTGACAACAGATAATTTTAAGAG AAAGCTAAACTGTGACGACAGATAAATTTAAGAGAAAGCTACACTGTGAC GACAGATAAATTTAAGAGAAAGCTAAACTGTGACAACAGATAATTTTAAG AGAAAGCTAAACTGTGACGACAGATAAATTTAAGAGAAAGCTAAACTGTG ACGACAGATAAATTTAAGAGAAAGCTAAACTGTGGTGCTCACGGCTCACG CTAGCTCAATTACCGAAACCCAAAATAGATCAATCACACTTTCAGCATGA ATATACCTTATCATTTAATATTCTCTGTTTTTCACTTTGACGGAGTTCCA AATTTACACTTCTATATCATCAAATCAAGGCTCAGGTTTTGCTATAATCA TTTGCACATAAATCTTTTTTATATCTAGAGCATTGAGTCCAAAGCAAAAG GCTCTAAGAATCTCCGACCTTTACTAAGCAAGAACAAGTGAAGCCTTACG ATTTGATGCAAGGATTGAATTTAACGTTTTCTTTGTATTCACACGGAACA TTTTTCGAAATTAAAATAGCTCGAATTTTAAAATAAAATATTAAAAATGC GTTCTAAATAACATGATCAAAACAAAATAATTGATGACGTTTTGTTATTG TTTTGCAGCAATAATGGTAGCACCAGTAGTGCTGGTAGTCAAGGCAACAA CGAGAACAACACGGCAACGTCAGGGTGGAACCAAAACGATTCTCTGTTTG TCTCTTTTCCAGCAATTCGTTGAAAACAGCTGGCGAATTAGCGGAACATG CTGCATACCTTGGACAGCACTATAAGCAGTGATTGTGTTTTTATGTAGAG AAAATTTATTTGGACAAAAATTAAGAACACAACGATGCTGGCTATCGATA CCCAAAGTTCTTTCAACAACCATTTGGCGTCAAAATAACGTCCATAACGT CCGTACGTATACCGTCAGATAAACATTGAAATAATGTTACGAGTCAGCTA GTTACTGGAAATTGAGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022112TCONS_00022112Clytia hemisphaericatranscript
TCONS_00022111TCONS_00022111Clytia hemisphaericatranscript
TCONS_00022110TCONS_00022110Clytia hemisphaericatranscript
TCONS_00022109TCONS_00022109Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022112-proteinTCONS_00022112-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000405supercontigsc0000405:40498..49614 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.28 1.24 1.13 2.12 5.77 4.13 13.36 14.39 8.45 8.92 5.59 6.57 14.62 13.01 13.25 9.94 11.81 9.65 20.15 30.75 6.18 7.12 3.39 4.99 10.34 12.85 43.71 36.05 6.08 4.96