XLOC_012656 (gene) - C. hemisphaerica

Overview
NameXLOC_012656
Unique NameXLOC_012656
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000427:231949..237431+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_012656 ID=XLOC_012656|Name=XLOC_012656|organism=Clytia hemisphaerica|type=gene|length=5483bp|location=Sequence derived from alignment at sc0000427:231949..237431+ (Clytia hemisphaerica)
TCTTGCAACTTATTTTATTTCCCCTAGCTTTAGGTACGTTTGTATGAATC TGGCAAATATACTTTTTCGTTTtctattctttcattttcagtatcaaaaa tatataaaccaatcaatatgaaaagaaaaacatgacaCTGATAAAACATC AATAAAAGTAATATACTTCTTTTGAACCAACCAATCAACCAAAAGATGGC AGAAGACGAATTAATGCAGCTACTTCAAGTTGATCTCACTGCTATTGAGT TGGATGCCAAAAATCTTCATCCtaaaaaatgtaagaattttTATCTTGGA ATTGCTATACAATATTTTATTTGTATAGTTGCAaggttgaaaataaattt gtatcaTTTTTCACCAAAAGAGATTATGGGTAGTTAGAAATTGTGTTACT AAATAGCCCAAGAAAGATAAATTAGGCTTGAAAAGTAGACTATTTAGAGT CAATTAGACACGTAAaagcaatgaagtataagcccgaagggctagagtcg aatgggcttttccagaaatttttttacccccactgttgaggatattgaac CCCCCtcatatcctactttattagtaaagaccacCTAGATATACACTcgc ttaaaaatatgctcaaccccctggatatcctctcttataaagatgttTAC CCCtagatatcgtattttttacttgaaaagacaacTACCCCCTAGATATC CGCTCCCTtatagatatttaaccccctggatatccacttttgaacagaAA TCGTTAACCCCttagatatccgatatcctcaacagggggggggggcacgg actatttctggaaaagcccaatctccttggtaggagtTGAAGCCTactaa atcctaccaaagtgaCGTGGCCTAGCGCggtccgcctggtttttacacaa attatggattgaaactaaaatttacacctgaatttccaaaaagatatcac tcgaaaacaaaggaatcggtagattcaatccgtcgtcaaaaatacagcac atattttaaggctttactttttcttgcctgagaaaggttaaagattcgat tctagcccttcgggcttatacttcattgcatAAAAGTAAGtatcaatttt tctttattgtttTATGAGCGAAACGACCACAAGTCTAGTATAACCGGATG GTTGAATCTTCCTTTTCTAGTACTATTCGACCAGGAAGTTAGCTTTTCAA CTATATTGATGATAgaatattttacattttcaggCAGTGCACGCCAATAT GTTGAGACATTTATCTTCCCAACCTTGCTCCCTGGGTTGAACGATTTGTT TCAAGCAGCAAAAGACAATCTTGTGTTTGAAGTAAGTTCTTTAACGATAG AATATCAACAAGCAATCGAATCGACGAGGTATGGTAGAGTGATCTAAGGG GAGGAGGTACAGCATCAGGGTACTGGCCTATAGAGCCGGGTGTTGGTGTC TAATTTTGAATCTCAAAAATGTTAGTACCCGTACTACCCCGGGTTTATCA CTCATTTCAAGCTAGTGCTGAAATTTGGTATTATCGCCAGAATGGGTGAA AACTTATCAATTTTTGCAAGTCAGAAtggaaatttctaattttgaaaaat tgaattgtcGCAAAATACTTTTCATCTTTTAAGctcaaccaaattttgaa atgttgcgattttttttacaagatttaAGCAGGAAAAAGGGCAGCTTAGT TAACGCtctcaaatttgattttgagtGAATTGGATTNTTTTTTTTACATG ATTTTCAGggttaaatgttcttaattccGCTCTTTTACTTATTTatataa tttaatttatttcattcaGGGGAGACTACTAGTATTACGTTGGCATCGTT CAAGACATACTTGACCTATTCAGTGCCGTAGAAAGCATTTCTATattggg ggggctgaagtttagtgacaccgcgagggccaaccatggtttggcccgag gggggaaattttgaaaatttgagctctagattacttgaaaatgcactcaa aacatgcacttaaaagacaattatgacaaattaaaaaagaaaaactttgc attttgcaaaataaccattttttttGCGTCAACTATATTTGAAAATTCAT TTATAATGACATTGTCTTGAATTCCAGTTTGGCATTTATTTCATTATAAA TATGTAACCCCTTCACGTAACCCCTTCACATAACCCATTGGTTTATGTTA CTCTAGAAANCGAGTTTGACATTTATTTCATTATAAATATGTAACCCCTT CACGTAACCCATTGGTTTTTGTTACTCTAGAAAAGAAGGACGAAATTCAA CGCATGTGACTTTCTTACTGAGTACCTTTACAAGTAAGacaatattttgt tcttttgaattaatcttttttattgTTAACTTAATAAATGCTTatcgatt ttcaaaattcacgaaaaaacTGAGTTTATCCTGGTTGTATCATCACTTAg gttagcctagaaatctaagctagacTGATTGAGTCACTTGGTTTGACTGA TTTTTCGCTGTGATTAGAAATCTTTGAAACAACGATAACGCTTTATTGCC ACAAGCCTAGCGAATTCGAGCTTGATTAACCAGGCCACACTTAGGTTTCA TGACTAGACCAAAACACAACACGTGACCGCGTAGGGGGCACTTatatggt ccgacccacggcttgtgccgcccttaagggtaggtttttcgagaccctcg aaatgcactgtaagggtgtacttttgatagaatgtACTACAAGGGTTTAC TTTTAGCTAGAAACACTGTAAGGGTACTGCTGAATCGTAAGTCTGGaagt aaaaatctgatgtatttttatatttttgactttcatctattttgatttgt tttgcatatTGTCTCGACATCTCAGGCTCTTTTTTgggtggcttcagcaa aataagatatgcaATCAagctacactgtaagggtgagaAACGTTTGGTAA GACGCACTGTAAGGGTGCCTTTTCACTGCTTaagagctgcactgtaaggg tgcctTTTCACTGCTTaagagctgcactgtaagggtccgattttgaaagc taATTTTTTGGTGGCACATgtcgtcgtttagaaatcgagtgccccccccc gggtacaTGACAAGNATAGCTAATTTTTTGGTGGCACATgtcgtcgttta gaaatcgagtgccccccgggTACATGACAAGTTAGTGATATCTGACACAG AATCAAGTTATAAAGCTtctttcaattcacgcaattcgTTGGCTCCCCAT CGTTATTAttataaatcataaaatttcTCTATTTCGATTCAGCAATAATC CAACACCGAAAGATCGTGAGAAGCAAGGCTTATGGGATATCCCCTTCGTC AAAGAAATCAACGGAAGAAAGTAAGGATCTTTTAAATTATTCTTTTGACG TAAGGTGTAGAACTGCATTGTTTTCGAAATTAGTCTGGGTTTCTAGGTTT GGCGTTGACTTTTGAATATCCTTTTTCTAGAGGAAACGCAAGTaggaaaa taagtaaaaaaacctTTTATGCTTGAAAATCCAGAGTCTTAAAACTGCGA GTAAGCATCGAATTGATAAAGTACAAAATCCCTCTCATATGTTTTGTTAC AAGGGGCGCGAATCAACCTCAAAAGCCACGCCTgctttgcaatttttttg ccaaactattataattttttgagaaatttttgacCTCATTAAAATTTCAT TGAGGAAGGATATCATAAACTTACTTTCTTACAACTTTGGTGGCAAAGGT TAAATAACAAGGGTCTATTCGCCGGCGACgagtttatctaacgttcatct TACAATGTATACATTGAGCATTAGTTGGACGTTGACATACCGGGTATATG CAAGCTGAggaattaacaaaaatattttaattctgTCCGGTCATTTTTAG CCCTCGACCTCCCATTCCACTTTCATTGATATGGACAGAGGCTGAAGCAG CTTTAGTCATACAATCTCACTGGAAAGGATATCTTGTGAGGAAGGAACCT GAAGTTCAAGAGTTGCGACAGTAccaaaaagaaatgaaagagGTAAGTta caaatttctttgatatcAAGAGTTAAAGGTTACACACACTACAAAACATG TTGTCCGGTAATACATTGACAATATTTATTACCGAGTGTTGTCGATATAC TTTTATAGAGTACATGTTATTTGTTCCGttcattacggtccgcaaaacat AGTTGTTCGCCAatagatagaccttttcataaatttgcgtcacgaacatc actcgcctcgtattcaaacaatttccatagtgatcatatcccttgagaca tcaaatgattttttatgaatagaaagtatttgtaataaaatccgctggga attaatcaccatggcaataatttcaaaacgaggtaagTGTTCGTGAcgca atttatgaaaaggtctaagTCCCCTTAATTCTGTTCATTATGAAACGAAG AAGATATCTTCCGAGTCGTTGATCTCGTAATGAATTAACTGAACCAAATA TCCCCATGGCCCTATCAAATTCAAAACAGTCTTGTTTAaagcccccccca gcggtttgcgtaaATGcttgaatgggctttttcacttacgtgaatgtgtg aaaaacaaaagaaaattgcgtgaatgcgtgaatttgggaaaattttttgc gtgattgtgtgaattgaaggtccgctggggggggggttctTTAAATAGGG TTAATTTCGATGGATCAACTTTTGTTCTATTGTAGAGTTCGTATCACATT ATGTTCAAAGTGGAAGAATTTTggaagcaacataaaattgaaGACCTCGA CGAGGCTGAAGAAGTTATTGAAGATACTTTAATCAAAACTGACTTTCTAT AGGAATTACTCTTATTTTTGTTTGGGCAATCGAGATtagtataaaaaatt gacttaaaaacttttaattttgtaTGGTCAATCCAGACTTTTATTGACTT TTTGTTGATGATGCGATGATGAAAAGNTTAATTTTGTATGGTCAATCCAG ACTTATATTGACTTTTTGTTGATGATGTGAtgatgaaaagtttttaacca aaATAACTTTCTATAGAAAACCCTCTTGGTATTGTTTGGCTTATCGAGGT GTACCTATATTCTTAGTGGATTAAACATTTACAGTTTTTTGATGAATGGA GACTTTTCCTGTGAAAGCACTATAATTCTATTGAATGAGTTTCACTAATC TCATTGTAGATTTATTAAAATGAACCTGTTAATATGCTATTTGATGATGT AATATATTCTAATTTAGAAATAATTAAACAAATGTAtcaaagaaattatt ttataataatgctatacaagttcgcaggccaccgtgcagGCACATGGGCC GCTCTTTTTTCGGTTTATAATTTTCTTAAGGTAGAGATTTTTTCCTAGGG AAATTTGAAGTTTGTGTCTTCTATTGAATTATTCATTTTGATTAGTTAAA TTCCTAATATGAATTGATGCCATAATAGTATTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00022568TCONS_00022568Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00022568-proteinTCONS_00022568-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000427supercontigsc0000427:231949..237431 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
74.18 70.33 51.92 45.64 53.79 40.89 43.01 45.11 46.08 37.41 36.58 38.72 8.15 7.04 9.34 11.15 16.49 18.19 11.79 10.98 14.21 13.08 24.92 21.85 72.98 55.05 13.25 10.21 10.29 9.95