XLOC_015438 (gene) - C. hemisphaerica

Overview
NameXLOC_015438
Unique NameXLOC_015438
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at sc0000626:109290..112908+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_015438 ID=XLOC_015438|Name=XLOC_015438|organism=Clytia hemisphaerica|type=gene|length=3619bp|location=Sequence derived from alignment at sc0000626:109290..112908+ (Clytia hemisphaerica)
ATGTAGTGCTCTTCCAACTACTCATGATCCGTATCACCGTATCAATCTAC
ACAAAGTACACAACCCAAACAAAATACACAAGCCACACGATGACCCAGAC
TGTAAGTACAAAGAAGCAACTTATCTAGCGATCTTATCTAGTCCCTTGAG
GGGATAATAAGTTTGCGAGGTGGCAGCTCAAagctcaaaaatccaaaatt
ctcaaacttcaatcaaatttttatttttatgggCATTTACGACAGAAATT
TTGACGTGGCGATTGTTGAGGATgtcaattttttatctttcctAATCAAT
TGCAAATGGAGAGAATTTTGAGGACAGGACCCTTTATTGCTAGCACATAC
CCAACACCCATTTTTCCTAAAGTAGCTCCCGGGTATTTAGCCTTTCTGGT
ATTCAAAAGCAATCTAGTGCCGCCCAAGGAAAATGACGCGAGAGAAGTAT
TTATGTTTTTGAAACGTAGTAGAAAATTTGTACTTTCATCTTTttaataa
tattattttttttatcttttgccTTAGTAGCCTCCCCCCACGCCCGGGAC
TTTAAGTGACAAGTGGGATAAGATTCCGAATGGTATGACCTGAATATATG
TATAACACTTCTGTCTCGatttaaaaatcatgaactgCCGATATTTATCT
CTCAGTTCTATTTTCAGGTCCATCATCACTTTGCCACCACAAAGACTCTG
GAATTTTCGCCTTGAAAGAACACAGTAACATTTTCGTTCAATGCTCTGAC
GGAAAAGCTATTTGCCAGAAATGCCCCCATGGATTGGTGTTTAGTGATTC
CTTGAAAACTTGTGTTAGACCTTCAGACAAGAAACTAacaacaacaacta
ctacaaCCACCACAACAACTACAAAAAAGCCCCATGTTCATTACAACCCA
TACAAAACACACAAGCCCCACAAGGTTCACAAGCCACGTACCACTAAAGC
TCCTTACAAACCACATGCTTCTAATCCAGATTGTAAGAAAACTTTCAAGA
TTTAAAATCTTCTTTATACACGCTCTCCTTTTAAGGGTCTTAATACACAG
CAAAACAAACAGTTCAAGTTGAGTCATAGTAAAGAATCATTTTCTAAATC
TATGATAAACTTCTGTAAATTAGCGATGGCGTAGATCTCTAAGGCGTTAT
CCATACAAAGCGGGGGCTCCTTGTTCGAATCCCCACTCCTTCCAATGCTC
CCTTCAGTTGGTTGCTGGTGTATAACTAAGCCAGCTAGTTACGGATCCCG
TAGGAATAATCAAACGTACTACGTCACTGAGCCATCCACGTAAAAGTTAA
ACTATTCCATCAAAATACTTGACTTAAAACCCTATTTCCTTGGATATATT
GCTTGAATTTAATTCTATTTTCAGGTCCATCATCACTTTGCCGCCACAAA
GACTCTGGAATTTTCGCCTTGAAAGAACACAGTAACATTTTCGTTCAATG
CTCTAACGGAAAAGCTATTTGCCAAAAATGCCCCCATGGATTGATGTTTA
GTGATTCCTTGAAAACTTGTGTTAGACCTTCAGACAAgaaaccaacaaca
acaactactacaaAAGCCCCTCATGACCCATATAAAGGAATCGAACCTCA
CAAACCCCACAAAACACACAAGCCACATACCACAAAAGCTCCACACAAAC
CACATGCTTCTAATCCAGATTGTAAGAAAACCTTGAAGATTTAAAATCTT
CTTTATGCCCGCTCTCCTTTTAAGGGTCTTAATATACAGCAAATCAAACA
GTTCAAGTTGAGTCATAATAAAGAATCCTTTTCTAAATCTATGGCAATCT
CCTGTAAATGAGCGATAGCGCAGATCTCTAATGCGTTATCCATACAAAGT
GGGGGCTCCTTGTCCGAATCCCCACTCCTTTCAATACTCCCTTCAGTTGG
TTGCCGGTGTATAACTGAGCCGGCTAGTCGTGGGTCCCGTAAGAGCAATC
AAACGTCCTATGTCACTGAGCCATCTacgtaaaaaaaataaactattCCA
TCAAAATACTTGACTTAAAACCCTATTTCCTTGGATATATTGCTTGAGTT
TAATTCTATTTTCAGGTCCATCATCACTTTGCCACCACAAAGACACTGAA
ATTTTCGCCTTGAAAGAACACAGTAACATTTTCGTTCAATGCTCTAACGG
AAAAGCTATTTGCCAAAAATGCCCCCATGGATTGGTGTTTAGTGATTCCT
TGAAAACCTGTGTTAGACCTTCAGACAaaaaaccaacaacaacaactact
acaaAAGCCCCTCATGACCCATATAAAGGAATCAAACCTCACAAACCACA
CACAATACACAAACCGCATACCACAAAAGCTCCACACACCACAAAAGCCC
CACACACCACAAATGCCCCACACACCACAAAAGCCCCACACACCACAAAA
GCTCCACACACCACAAAAGCTCCACACAAGGTTCACAAGCCACATACTAC
TAAAGCTCCACATGTACCTCACTCAGACTGTAAGTATCAAATCTTAACAA
AAGTAAATCTTACTTACTGACTACGAATTTTACAGCTTAGATTTGAATTC
TGAAGTATTACGAAATGTCTACAGAAAGGCAGCACCAGGCCTTTTAGGCC
TTAAAAGTAGGAGTTTACGCTTGAAACGAGGAAATATATGACTTAGCCTA
CCAAATGACGACTTAtcatcttataaaaacattaacTATACATATTTTTG
TCATAGGTCCAACCTCATTATGTGCCAATAAAGTTGATGGCTCTTTATTC
CGCCTCAATGATCATCAACCAAACATCTTCGTTCAATGCATTCACGGAAA
ACCAATCTGCAAAAAGTGTCCAGAACATCAGTTCTTCAATGATAAATTCA
ATGTATGTGTTCGACGAACCATCCCCCAGACCACAACAAAGAAACCACAT
GTCAGCGTTGTTGGACATCACAATCCAAACAAACCACATAATCCCCATAA
AAACCAATGTAAGTATTTTGACACTAAAATGGTCTGGGAGAGAAttaccc
tgtctcacagcccaaTTTGAACTTCTTCCTATAGCGGTGATAAAGATTTC
TAACGAAATCCCAATAGGGTTAGAAATTCTATGTCAAAAAACCCAGTGAG
AATAGTTTTCCAGCGTAATTTTTTGCTATTGAATTTTAAATGTGAATTGA
AAGAAATCTATTTCTCAGAatttgtaggatattttttccagtggAGTGGG
GATCCCCGTGAGAATTGATACTCTCCACCTAAATTTCCTGTCTACTCTAG
CTTATGGCATGTCCAAAAATGCCATAAACTGGGCGCACAAAACATTCAAC
AACAATCATTTATGTACAAAATCAGTGTACTCGGATGTAGAATTAAAAAT
TACTGAATTACTGAATTACTGAATTCTTCTTTTAGGTCCAAAATCCTTGT
GTGCTGATTACCCACACAGTGACTATGTTGTCTTCCGATACCCACACAAA
CCAACTTATTACGTCCAATGTACCGCTGGAAGACCTGTCTGCAGAAAATG
CCCACATGGACTGATCTTCGACAATAAAGTCAGAGTGTGCGTCTtcccaa
aatattgagaaataaATTCTCAGGATAAATAAAGTTGCTGGCCCAAGTAT
CTACTGGATCTACTTttac
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00027416TCONS_00027416Clytia hemisphaericatranscript
TCONS_00027417TCONS_00027417Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00027417-proteinTCONS_00027417-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000626supercontigsc0000626:109290..112908 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.23	0	0.17	1.01	0.89	0.3	0.28	0.73	0.77	1.6	1.01	1.58	4.14	0.82	0.93	1.25	0.43	0.32	0.39	0.63	0.45	0.14	0.16	0.41	0.6	0.23	0.42	0.28	0.14