TCONS_00013838 (transcript) - C. hemisphaerica

Overview
NameTCONS_00013838
Unique NameTCONS_00013838
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1501

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00013838 ID=TCONS_00013838|Name=TCONS_00013838|organism=Clytia hemisphaerica|type=transcript|length=1501bp
CTTTTTAGTGCTTCAGCCAGTCATTTTTGCTTTTCAAACAGTGAAAATAA
CATTAACCTTGCAGTTTCTATCGACTATCAAATTGACGAgattcaaaaaa
acaaaaaaataactcaaaatgCAGGCTCTATTTGGGAAAAAGAAGACTCC
TGAGCAAATGCTCAGACAACATCAACGTACTTTGACAAGATCAATAAGGG
ATTTAGATCGAGAGAGAACAAAGATGGAAAATCAAGAGAAGAAAGTTATC
AATGACATAAAAAAGATGGCTAAAGAGGGTCAAATGGATGCGGTGAAAAT
TATGGCCAAAGATTTAGTAAGAACAAGAAGATatgtcaaaaaattcattc
TAATGAAAGCGAATTTACAAGCAGTTTCCCTCAAAATACAGACACTTCGG
TCCAATAATGCAATGGCCCAAGCAATGAAAGGCTGTGCAAAGACCATGGC
AACAATGAACAAACAGTTGAAGTTAccacaaattcaaaaaatcatgATGG
AATTCGAAAAACAGTCAGAAATTATGGACATGAAGGAAGAAATGATGAAT
GACGCAATCGATGACGTCATGGGTGATGAAGACGATGACGAAGAAAGtgA
CGCCATCGTATCTCAAGTGCTGGATGAATTAGGTCTTGGATTAACCGACC
AGTTATCCGAGCTTCCAGGAGCAGGAGGGAAACTACCAGCTGGTCAGAAA
GCACCAAGTGGTCAACAAGCAGTTGCTGCTGGGGGTGGTGAAGATGATGA
TTTACAAAATAGGTATGTCACAGTATTGCAACTTTTCTCTCGGTGGACGG
AAATATGTTCAGTTCAAATTTCGGATCACCGAGATTTCAAACTAGGAGTG
TTattatcttcgctttctgatttgatcTACTCCCCCCCCCCTCTTCAGAA
TCATTTAAGGAAAAAAAGTAGTTggagctccagcttctggactaaaggcc
ggtctccacttgcgcgcgctgcgatcgcactttttggcttcaattctttt
tgcttggaCACGTCaaaggaaaaaaagtcagttcttttaaataactttcg
aactactttttcaaatttaatgtataatagctcaaaattcaagtttgaGT
ATCCTCtttacgataaaaaaagaatggacaaaaaatttaaatcctgaagc
tcacagtATCTCGACAaacttgtatacttttttttggtgcatcCGGTAGT
TATAATTATATAGCACTCTGACATCATCGATTCGTCTAACCTTGATTAGT
TtgttattacaaaaaaaaagtggtCTGGCGATTTTTTTGGTCTATTTATT
ACATTTTGCGTGTCTACTAGACACGAAAGTGAAGTCAGTTATTTGAAGCA
GTATCTTCCCTAGTTCAAAGGTGGAATATTGGTAAAAGGTTacagacacc
cccttctcacagactcggtaggacttttttagccagtggggataaaaaag
cggactgaaactcgatgggggttAACATtcctatattttttatggctggg
g
Run BLAST on NCBI

protein sequence of TCONS_00013838-protein

>TCONS_00013838-protein ID=TCONS_00013838-protein|Name=TCONS_00013838-protein|organism=Clytia hemisphaerica|type=polypeptide|length=342bp
MQALFGKKKTPEQMLRQHQRTLTRSIRDLDRERTKMENQEKKVINDIKKM
AKEGQMDAVKIMAKDLVRTRRYVKKFILMKANLQAVSLKIQTLRSNNAMA
QAMKGCAKTMATMNKQLKLPQIQKIMMEFEKQSEIMDMKEEMMNDAIDDV
MGDEDDDEESDAIVSQVLDELGLGLTDQLSELPGAGGKLPAGQKAPSGQQ
AVAAGGGEDDDLQNRYVTVLQLFSRWTEICSVQISDHRDFKLGVLLSSLS
DLIYSPPPLQNHLRKKSSWSSSFWTKGRSPLARAAIALFGFNSFCLDTSK
EKKSVLLNNFRTTFSNLMYNSSKFKFEYPLYDKKRMDKKFKS
Run BLAST on NCBI

transcript from alignment at sc0000174:319427..334420+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00013838 ID=TCONS_00013838|Name=TCONS_00013838|organism=Clytia hemisphaerica|type=transcript|length=14994bp|location=Sequence derived from alignment at sc0000174:319427..334420+ (Clytia hemisphaerica)
CTTTTTAGTGCTTCAGCCAGTCATTTTTGCTTTTCAAACAGTGAAAATAA
CATTAACCTTGCAGTTTCTATCGACTATCAAATTGACGAGTAAGTGTTTG
AGAGAACTTTACTTTTTAAAGACACTGACCAATTTGTAATGCAGGACATT
TTGTCATAgatagggtggacaggccaaaattttcccctcaatttttttag
aaaccaaactattGAAAGTCcttccttacctttgtgagaaaaacgagggg
tcatttattagaattggttaagtgttcccaaagttattccattttcaaaa
cacaaaaaatcaccttttcaaagaatcgcctccttacaccacgccagcaa
gaaataatttttggaagCACCAAagcaaaatcgcgccaaaaatggcggat
gaaatctagtgtTCCGTGTGGCGGGGGGNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNcattctttttaataattttc
ctaacttaattggaaaatagatgattaacttttatatttgaacaatatat
atttgaataaagatgaagatttttaaatttataatatttaaatattgggt
cctgaaattacacatgcgcgatcgtagcaagttttcgaaaatctggcccg
atCATGGTCCAAAacgaggcccgaacatgtttgggccatgccgtgggtcg
tgcATATCATCACTTGTATCCTTTTTGTAGTGTTATTCATGGAGAGAGAG
ggttatttttctcttttctcacttacttttggtttttacataaatccttt
ttgaccatctcgtaaacaagcttgaagtccttctttcagtttgttttcac
tttattaTTCGAAGgcttcttcttggaataataagtTGTTAAAGCGAGCG
CTACTCCGACCCAGTCTGCGTCACTGCGAACGAGGAACCAGTGTGCGAAc
gatctttttaaagaaaaaattagagctcTGCTCGCAGGTAATACTTTAAC
TCTCTTCTTCATCCgagatgatacaggggtgtttgaacttttcaaaaccN
aagcttataacttgacaactacttgaccaaacttaaaaagttgtaccgca
aaatttaagttagcatgtcctctttctaataaaagtggttttgagtctaa
acaagactttgttcggcctcagtgcctcaccaaacgtccaaagttttttc
tgctgcacccggtatttttttgttttctttttcaagttttgctcatcgaa
aagggcggcaatgtagtgtcttctttttaATTGAGATTGTCAGCGCTGTT
gaatgttttgacgttgcaatgtcttcattttgaatatggtgttcggatcg
ttcgcggactggaaccttttttatatcaactactgGTGATATATGTTtgt
attgattttgaattaatgagctaacatgtttcaatgaaattttgtgtgat
ggaagataacagattttaaaaagaggaaagtcattttcagaactcttctt
gtgcaaattttcttataaaaaacatttcctcTCGCTATCAGCCATGTTTA
CAtgttttcgtgatttttttacttggcctcgtTCAAAATCGGTTTGGTGT
TGTTCTAATGCTctgtttattttaaaatttttggagaGATTACAAGGAat
agtttgaggattctgctgccacaagtgtttcaaccggtattccaacgaag
ccatattttggtttatacagaaattttgcccgctcaaatcaaaacaacaa
aatggtcaagctcactaaagcaaaacattgccgccacagcatttccctgg
ataaaaattctggtcacgtgaccatccgtgattttagaccaatgaaaacc
cttcatttccccggattaaagttgtgtctacactaacacacgggaaatgg
ctagaaaaagagaaaaaaaaccgggggtcaaattaaaattttcttccttc
ttgcggcaaacataaaagactttaagagcccatttatttaagaaaggggt
gttatatcataaataaattatgtaagtaagtgatattttaagtaacaagt
taatcaacaattttattttgaagtttgtctttaaaaacaaaacccccgtg
ctagatgataatttcattttcttaacttatggacccatttggaagtcttt
gtaaaacagatcatttggcagtgtagttgctgcctatacaagaattggaa
tgtaaagtctgaagtcgtaactccttgtcagtgaccccgcagagaaattt
ttagttggcagacactgactttaggtaggtttggaaattgttttattttg
aaatgtaatctacACTtcagatgaatacttttatttatttgatttatttg
gattcatgaaaggttcaaggtttgtttactttttatttcaaattatttca
ttgatttattgagctgcaatagctgattgaaaaacgtcGGCTTGGcctcc
attttgaatttaaattttttttctcctgtactcggcaacttaaaggttgt
tcgtaatacgcgatttggcttacgcgtaacacttgtgctgcacaaaggaa
gttctatagaagtttgtttttggtagtttttttcaagttcaaagacgcTC
GTTTGTGCACTGGTGACTTGACTCTACTGTACAAAAATTACGGAAAACGG
ATATTTGGACTTTTGTACTCTATGCTACtcgcaagcacttaagctaaagt
cctgcaaaagcgggacgaaaatcagttttttgaattttgcaaaaaaacgc
cacatagaagatctttcaaattcagtatgtgaatagtgcagtaaaaaata
caacttttctatttttccttttttttgcaaaagttctaggaatgaaaata
gaggtataatgataattgaatactatccactgatgatccgcggcactatc
gtaaagctaaaATGGCTTGGCATTCTCTTCCCTTGAGAAGATGATTGAGA
GATTAAAATTTTTCACCCGTGCGGGAGCTCGCGGGCGTTCTGCAAGCGTT
CTTGGTTTAATCCTCGAACCgcattaaaaatggtagaccaGCTGTgaaaa
gatcattttgatggaagttgttggaatgtttacaagactcttgacagaaa
atcttttgttttattgtcaatgatgacagtgccgttattaattttgttag
atNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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taagtgcactttatagttttgattcccattgaaaaatcatattctggttt
tcatgttattagatgctgttttagagctttagagctagcctgaaagagac
cgccttatagtctagctaaccaaaaagatgcggccacctaagtATGAAGT
Gaagtgaagtcaggtaacttgcatcagtggaggctaacatgcatagccct
caaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNttgttgaaatacgcattatttgcgcttctttGAAGCAAG
TAGCCAttgaaatagtatttattttatatattttgacttttgtttagaaa
tattttgcagATGAGAGAgacccttccaaatttccattgcgatataattt
tgcggattttcgcggatgaaaCCCATTTCCgtgaaatccgcaaaatttaa
tccccgcgaaagtttatcccattaaagtaatagAATGACATATACAGTTT
ATATGGGTGAACAGGAACAGACCTCACaagttaggctaactgttatgatc
ACCATTCTTTACGCTTACACCCACCATATTTTGCCCGCACACACCCGCAC
AGGCTACTTGCAACCAGATGGTACTAATCGAATGGTTGATggtgatcgaa
gtaatcaataatgattgATAATAATCTAAGGTAGTCAGTAACCACCTATC
gattttatcgttttttattgGTGATGGAATACTAATCCaaattatggcat
tttctttgACCATTTTCGATTAGTTTGATCATTTTGATTAGTTTTCGATT
CACTTTCGATCACTTtcaatcatattgaatacctttgATTGTATGGAATA
TGTTTCCTGAAGCAGCGCGTCGGAATCTGAAACCAATTTTATTTCACCca
attaaaacaaaataaacactCTCCTGGAAAGTTAGGGGGAGTTTCACCCT
AAAATTTTCCATAGAAAGGGAGGGGGTTGGAGCTACACAACTATTTAGGG
GGGTTTCTAATGTACTTGGAAGAGATGAAATCTCATCATTTACATGGGGA
CTTTTAATAATTAAGCTTTTAATGGTTgacttcaattactcaaatttaaa
agtttttgaagctgaaaaatcttcaactgcgctgcaatatttttatataa
aatgagtaaaatattttatcttttaaagCTTGGAACTGCAAAACAATATA
CATTGGATAACCGAAAGACCTTGGGATGCCAAAAAAGTTGTGGATCTTTG
gtctttggggggacttaaactaatttttgcctgcgaacctaaacccaggc
tgacgctatgacGTAGTATGAGGAAAATTTGGAGCTTTGCTATTACATTT
TGCCTAAAGTGTGACAGTCATGAAATTCTTTTAGTATCATAGTAAGCCAC
TTTCCTGATAATAATTGTAACTTTTAGTTTTAGgattcaaaaaaacaaaa
aaataactcaaaatgCAGGCTCTATTTGGGAAAAAGAAGACTCCTGAGCA
AATGCTCAGACAACATCAACGTACTTTGACAAGATCAATAAGGTGAAGAT
CTATGTTTTATGAAGTATAAGGAAGATTTCCAAGCCTCCATTAAAGACTT
TATATTAAATGTTTCTCTCATTGGCGGTTATTTTAAATCAACACTTTGTT
AGTCATACTACTTTCGGACTAGATAAGCACACATATTGACCAAAACTTAT
GTTTTAAAGGTAGAATAAATTGTTGttataaaatcaacaaaacattaTTG
GAAGATATATTGTTTGGCCATTACCTTTTGTTGTTGGTATCAAGTTTTTC
TGATGTGTCTTTTATCTATCTTTAACTTTGCTCTCTAACTCTAGGGATTT
AGATCGAGAGAGAACAAAGATGGAAAATCAAGAGAAGAAAGTTATCAATG
ACATAAAAAAGATGGCTAAAGAGGGTCAAATGGTATTTCATGATAacttt
tataaattttcatcGTATAATGCAACCCTAATGATTATGACATTTGAAGA
ACCCAATTTTAGATCATAGTTCATCATTTTCAAAGCCATTGtatatttga
attttcttttagaAGAAGTGTTTGTTCTGtttataacttttcaaattgtg
TATAATATATAATTCTCTACAATTCAACCAGTTTGCAGTATGGAAAATTT
GCACTTTTTAAAGATAAAGTTTTAAGGTTCAACTTTGGTATTTGAAGATT
TCTAACTGGCTCTTCCTGTTAATTGCTGTTATGAAATAATGTAACCGTCT
AAATGTTTTATTATAGGATGCGGTGAAAATTATGGCCAAAGATTTAGTAA
GAACAAGAAGATatgtcaaaaaattcattcTAATGAAAGCGAATTTACAA
GCAGTTTCCCTCAAAATACAGGTAGGCATAAGCGAATTTACAACAGTTTC
CCTCAAAATACAGGTAGGCATAAGCGAATTTACAAGCAGTTTCCCTCAAA
ATACAGGTAGGCATAAGGGAAATCCTGGAGCAGCTGAGCTTAACaactaa
aagagaaaaatagacCCTATTATAGAAGTCAATTTTTAGTGAAACCTTTT
ACCCAATTCTCTGGATAATGAAAAGATTTATTCTAAAGCTCTCAATTTAT
TTTAACTTATATTTTTACATATAATCTATCTTGTAAATTTTAGACACTTC
GGTCCAATAATGCAATGGCCCAAGCAATGAAAGGCTGTGCAAAGGTATGG
TTTTTTTTAGTTTGCGTTTTTGGCTTTTGTTGAGCCTGTCAAAATCAACT
CAATTTCAAAGGATATCTTATTCATGTACATTCCTtctaaatatcttttt
ttgtctATTTCGCCACCTTTTACTAAGAGATGAAAAATAGGATGGTTAGA
ATTACAATTTGAGACAAGTAGATATTTACTTACTTTGTTGCAAATCAGGT
AAAAAGTTTCGATCATTGATTCCATCCAGCATGTTTTTTTCTATCTTTCT
TGTCTCTAGCAAATGGTGACGAAATTAGAGGGGTAGCCAACATTAGACGT
ATTTACGGTGTCTCTAAATTAATGGTGGAATTTCATTGaatgttgttttt
ctttcttatagACCATGGCAACAATGAACAAACAGTTGAAGTTAccacaa
attcaaaaaatcatgATGGAATTCGAAAAACAGGTATAAAAAACGTTATT
TAGCGATTTTATGCTACAGTAGAGTCTTCATATAATTCTGATCTCTCCTA
TCTCTAATGTCTGGCCCCTCTCAGTTAACGAATCCGCATAAAATCGAAAC
CAGCCTATACAACTTGAAATTTCTACAActctagaaatttttattacccT
TGTGTGTTCGAATTCTATTGATTTGGAATATATTCTGGCAGGAACCAATG
GACAGTGATTGATCTACACTGGGAGTCTAGTAACACCCTATGCTTCCCAG
TTTCCAATTCATGTTAAAACATTCGGGAACAACATCGGGTCTTTTGTCCT
AAACCAATAATGTCGAGTCCTATGAAGGATTCGACGGCATTCGGCCATTT
AATATCATAAAAATAAAGGACTAATGGTATCAAGAGTTTTTAAAATGCAG
CGATCCCAATCTCATTACAAATTTCATATTAACTAGCACAAATCTAAACA
ATGAAAAGTATAATATGAAATAAACAATTTTACTGAAAGCATTTTCCCGC
TAAAGGATCACACCCCAATGAATGTCATCTAATCATAATTAAATGTCATC
ATTCTTCTGGGCAATGACTTCACATTGTAGGATTTTAGTGCAGGGTGGCC
ACgcatgctggaaaaactggGAAACTGAAAAAATggcctttttcagaaaa
tttactggaaaaactggaaatagGTACATTTTTCAAACAGGaaagctgga
aaaactggaaaaatattttttgatcttCGCATTTTAACTTTATGCCAGGA
TTTCGTTAGAATTATTATTATGTGATTaacatatatttttattatttatt
atataaTTTTCATAAGATGTTATGATGATGTTATAAGATGCTAGTATAGG
CTTTTTAGGATTTTTATGAGCCTAGATATGTATGATCGATTGAAAAgaaa
tgtcttttgaaaatgtAGAATTAATAATTTTGCACTCGCCTATAGCTGGA
AAAAGGTACTGATCTTTGGGTGAAGGCTGGAAAAAGGTACATTTTCCAAC
TGAAAATACCTGGAAAAAAGGGtgttttttaccaaaaaagttggattttt
CTTCTAAAAGAAGCGTGGCCACCCTTAGTGCCTGCACTGCATCGAATAGT
GGTTGTAAAAGATTCCTAATTATTGCTTTTAATAAAACTTTCTTCATCTC
TTTCAGTCAGAAATTATGGACATGAAGGAAGAAATGATGAATGACGCAAT
CGATGACGTCATGGGTGATGAAGACGATGACGAAGAAAGGTATGTCggag
caaaaaaaacaagcaacatgctgaatggacctacNNNNNNNNNNNNNNNN
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NNNccacttcagccattctttagagaatcttgccctccatctttgtacaa
aaatcagaaaaaagtaatgacaggattttgcacaaagtccaaaaaaccct
attcttaggtagtttttggcctaaatttgcccaaataaattttttctcaa
aaatcgggctccgtcacgttctgggcattgccattttgcatcattttgca
aaaaatcagaaaaaactaatgagccaatcctgagaaaagctggtaacaga
cggacagacggacggacggacggacggacggacggacggacggacggacg
gacatgggttaatttatagaacctccaccggggcacccgtcggtaggtcc
aaaaaactggACTACCAAGATATTTAAAATGAGAGTTGAATAAAATCTTA
TTTCAAACTCAAAGTTTCGTGGCGCGTGTATGCTTATCTTCAATTAAAAT
TTAGTCTGATACTGCTCTTTAAATTATCGAGCACTACACAAAAAGAAGAT
AAACTCCTCCCAAATACTACCAAGATATTATTTCTCATATTATCCTTTTG
TAGGTAACGTCTCGAACCTTTATcttaaatttctattttcttttcttcaa
gTAATAATATTGTTACATTttgtaattaacttttttaattttttcagtgA
CGCCATCGTATCTCAAGTGCTGGATGAATTAGGTCTTGGATTAACCGACC
AGGTACAAGCATTCAAATTTGTCAGAAATTTTTGTCTCTTTATCCTATGA
CCTTTATGTGTCTAATCTTTTAAGGATTCATCGATCTTGTAGAGATCTTT
CATGGCATTTATGCCTcaagctaaggctacactgatgATTTTgcaggcgg
ctgcaatgcaattTTCTTGTAAAGTTATAGGCTGGTTTCGAATTGCATTA
CAGCCGCCGGAGAAAAATCAGTTGTAGCCTTATAAAGTTATAAGTCAATC
GTAAATACGCTTTTACTTGATATCTACAAAAAAGTAGTAACGAGTTCTAA
ATTTGAGTATGACAAAAAATTCAAGCAGGAATTCAATGGCTGTTATTGCC
TACAGATATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNttttttttttaattccccccccccccccctcttcaGAATCATTTAA
GGAAAAAAAGTAGTTggagctccagcttctggactaaaggccggtctcca
cttgcgcgcgctgcgatcgcactttttggcttcaattctttttgcttgga
CACGTCaaaggaaaaaaagtcagttcttttaaataactttcgaactactt
tttcaaatttaatgtataatagctcaaaattcaagtttgaGTATCCTCtt
tacgataaaaaaagaatggacaaaaaatttaaatcctgaagctcacagtA
TCTCGACAaacttgtatacttttttttggtgcatcCGGTAGTTATAATTA
TATAGCACTCTGACATCATCGATTCGTCTAACCTTGATTAGTTtgttatt
acaaaaaaaaagtggtCTGGCGATTTTTTTGGTCTATTTATTACATTTTG
CGTGTCTACTAGACACGAAAGTGAAGTCAGTTATTTGAAGCAGTATCTTC
CCTAGTTCAAAGGTGGAATATTGGTAAAAGGTTacagacacccccttctc
acagactcggtaggacttttttagccagtggggataaaaaagcggactga
aactcgatgggggttAACATtcctatattttttatggctggggatttcaa
atcttcttttttttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNacggacggacatgggttaatttatagaa
cctccaccggggcacccgtcggtaggtccaaaaaactggACTACCAAGAT
ATTTAAAATGAGAGTTGAATAAAATCTTATTTCAAACTCAAAGTTTCGTG
GCGCGTGTATGCTTATCTTCAATTAAAATTTAGTCTGATACTGCTCTTTA
AATTATCGAGCACTACACAAAAAGAAGATAAACTCCTCCCAAATACTACC
AAGATATTATTTCTCATATTATCCTTTTGTAGGTAACGTCTCGAACCTTT
ATcttaaatttctattttcttttcttcaagTAATAATATTGTTACATTtt
gtaattaacttttttaattttttcagtgACGCCATCGTATCTCAAGTGCT
GGATGAATTAGGTCTTGGATTAACCGACCAGGTACAAGCATTCAAATTTG
TCAGAAATTTTTGTCTCTTTATCCTATGACCTTTATGTGTCTAATCTTTT
AAGGATTCATCGATCTTGTAGAGATCTTTCATGGCATTTATGCCTcaagc
taaggctacactgatgATTTTgcaggcggctgcaatgcaattTTCTTGTA
AAGTTATAGGCTGGTTTCGAATTGCATTACAGCCGCCGGAGAAAAATCAG
TTGTAGCCTTATAAAGTTATAAGTCAATCGTAAATACGCTTTTACTTGAT
ATCTACAAAAAAGTAGTAACGAGTTCTAAATTTGAGTATGACAAAAAATT
CAAGCAGGAATTCAATGGCTGTTATTGCCTACAGATATAATAAGATAAAA
CTTaatccgaaaattgattttgctatggaacacaaacaacaaaattttca
ttttttgaaaaactaattttatttcgCTTCATAACCAAAGCATCGTCAGA
GTATAGAATGATTTCATTAATTCATGCCTCTCTATTGGTCTCCCCGTTCA
AACAAAAAGCAACTAAAATTacactgtttttatttttcatcttagTTATC
CGAGCTTCCAGGAGCAGGAGGGAAACTACCAGCTGGTCAGAAAGCACCAA
GTGGTCAACAAGCAGTTGCTGCTGGGGGTGGTGAAGATGATGATTTACAA
AATAGGTATGTCACAGTATTGCAACTTTTCTCTCGGTGGACGGAAATATG
TTCAGTTCAAATTTCGGATCACCGAGATTTCAAACTAGGAGTGTTattat
cttcgctttctgatttgatcTACTCCCCCCCCCCTCTTCAGAATCATTTA
AGGAAAAAAAGTAGTTggagctccagcttctggactaaaggccggtctcc
acttgcgcgcgctgcgatcgcactttttggcttcaattctttttgcttgg
aCACGTCaaaggaaaaaaagtcagttcttttaaataactttcgaactact
ttttcaaatttaatgtataatagctcaaaattcaagtttgaGTATCCTCt
ttacgataaaaaaagaatggacaaaaaatttaaatcctgaagctcacagt
ATCTCGACAaacttgtatacttttttttggtgcatcCGGTAGTTATAATT
ATATAGCACTCTGACATCATCGATTCGTCTAACCTTGATTAGTTtgttat
tacaaaaaaaaagtggtCTGGCGATTTTTTTGGTCTATTTATTACATTTT
GCGTGTCTACTAGACACGAAAGTGAAGTCAGTTATTTGAAGCAGTATCTT
CCCTAGTTCAAAGGTGGAATATTGGTAAAAGGTTacagacacccccttct
cacagactcggtaggacttttttagccagtggggataaaaaagcggactg
aaactcgatgggggttAACATtcctatattttttatggctgggg

Coding sequence (CDS) from alignment at sc0000174:319427..334420+

>TCONS_00013838 ID=TCONS_00013838|Name=TCONS_00013838|organism=Clytia hemisphaerica|type=CDS|length=8232bp|location=Sequence derived from alignment at sc0000174:319427..334420+ (Clytia hemisphaerica)
atgCAGGCTCTATTTGGGAAAAAGAAGACTCCTGAGCAAATGCTCAGACA
ACATCAACGTACTTTGACAAGATCAATAAGGGATTTAGATCGAGAGAGAA
CAAAGATGGAAAATCAAGAGAAGAAAGTTATCAATGACATAAAAAAGATG
GCTAAAGAGGGTCAAATGGATGCGGTGAAAATTATGGCCAAAGATTTAGT
AAGAACAAGAAGATatgtcaaaaaattcattcTAATGAAAGCGAATTTAC
AAGCAGTTTCCCTCAAAATACAGACACTTCGGTCCAATAATGCAATGGCC
CAAGCAATGAAAGGCTGTGCAAAGACCATGGCAACAATGAACAAACAGTT
GAAGTTAccacaaattcaaaaaatcatgATGGAATTCGAAAAACAGTCAG
AAATTATGGACATGAAGGAAGAAATGATGAATGACGCAATCGATGACGTC
ATGGGTGATGAAGACGATGACGAAGAAAGtgACGCCATCGTATCTCAAGT
GCTGGATGAATTAGGTCTTGGATTAACCGACCAGTTATCCGAGCTTCCAG
GAGCAGGAGGGAAACTACCAGCTGGTCAGAAAGCACCAAGTGGTCAACAA
GCAGTTGCTGCTGGGGGTGGTGAAGATGATGATTTACAAAATAGGTATGT
CACAGTATTGCAACTTTTCTCTCGGTGGACGGAAATATGTTCAGTTCAAA
TTTCGGATCACCGAGATTTCAAACTAGGAGTGTTattatcttcgctttct
gatttgatcTACTCCCCCCCCCCTCTTCAGAATCATTTAAGGAAAAAAAG
TAGTTggagctccagcttctggactaaaggccggtctccacttgcgcgcg
ctgcgatcgcactttttggcttcaattctttttgcttggaCACGTCaaag
gaaaaaaagtcagttcttttaaataactttcgaactactttttcaaattt
aatgtataatagctcaaaattcaagtttgaGTATCCTCtttacgataaaa
aaagaatggacaaaaaatttaaatcctgaatgCAGGCTCTATTTGGGAAA
AAGAAGACTCCTGAGCAAATGCTCAGACAACATCAACGTACTTTGACAAG
ATCAATAAGGGATTTAGATCGAGAGAGAACAAAGATGGAAAATCAAGAGA
AGAAAGTTATCAATGACATAAAAAAGATGGCTAAAGAGGGTCAAATGGAT
GCGGTGAAAATTATGGCCAAAGATTTAGTAAGAACAAGAAGATatgtcaa
aaaattcattcTAATGAAAGCGAATTTACAAGCAGTTTCCCTCAAAATAC
AGACACTTCGGTCCAATAATGCAATGGCCCAAGCAATGAAAGGCTGTGCA
AAGACCATGGCAACAATGAACAAACAGTTGAAGTTAccacaaattcaaaa
aatcatgATGGAATTCGAAAAACAGTCAGAAATTATGGACATGAAGGAAG
AAATGATGAATGACGCAATCGATGACGTCATGGGTGATGAAGACGATGAC
GAAGAAAGtgACGCCATCGTATCTCAAGTGCTGGATGAATTAGGTCTTGG
ATTAACCGACCAGTTATCCGAGCTTCCAGGAGCAGGAGGGAAACTACCAG
CTGGTCAGAAAGCACCAAGTGGTCAACAAGCAGTTGCTGCTGGGGGTGGT
GAAGATGATGATTTACAAAATAGGTATGTCACAGTATTGCAACTTTTCTC
TCGGTGGACGGAAATATGTTCAGTTCAAATTTCGGATCACCGAGATTTCA
AACTAGGAGTGTTattatcttcgctttctgatttgatcTACTCCCCCCCC
CCTCTTCAGAATCATTTAAGGAAAAAAAGTAGTTggagctccagcttctg
gactaaaggccggtctccacttgcgcgcgctgcgatcgcactttttggct
tcaattctttttgcttggaCACGTCaaaggaaaaaaagtcagttctttta
aataactttcgaactactttttcaaatttaatgtataatagctcaaaatt
caagtttgaGTATCCTCtttacgataaaaaaagaatggacaaaaaattta
aatcctgaatgCAGGCTCTATTTGGGAAAAAGAAGACTCCTGAGCAAATG
CTCAGACAACATCAACGTACTTTGACAAGATCAATAAGGGATTTAGATCG
AGAGAGAACAAAGATGGAAAATCAAGAGAAGAAAGTTATCAATGACATAA
AAAAGATGGCTAAAGAGGGTCAAATGGATGCGGTGAAAATTATGGCCAAA
GATTTAGTAAGAACAAGAAGATatgtcaaaaaattcattcTAATGAAAGC
GAATTTACAAGCAGTTTCCCTCAAAATACAGACACTTCGGTCCAATAATG
CAATGGCCCAAGCAATGAAAGGCTGTGCAAAGACCATGGCAACAATGAAC
AAACAGTTGAAGTTAccacaaattcaaaaaatcatgATGGAATTCGAAAA
ACAGTCAGAAATTATGGACATGAAGGAAGAAATGATGAATGACGCAATCG
ATGACGTCATGGGTGATGAAGACGATGACGAAGAAAGtgACGCCATCGTA
TCTCAAGTGCTGGATGAATTAGGTCTTGGATTAACCGACCAGTTATCCGA
GCTTCCAGGAGCAGGAGGGAAACTACCAGCTGGTCAGAAAGCACCAAGTG
GTCAACAAGCAGTTGCTGCTGGGGGTGGTGAAGATGATGATTTACAAAAT
AGGTATGTCACAGTATTGCAACTTTTCTCTCGGTGGACGGAAATATGTTC
AGTTCAAATTTCGGATCACCGAGATTTCAAACTAGGAGTGTTattatctt
cgctttctgatttgatcTACTCCCCCCCCCCTCTTCAGAATCATTTAAGG
AAAAAAAGTAGTTggagctccagcttctggactaaaggccggtctccact
tgcgcgcgctgcgatcgcactttttggcttcaattctttttgcttggaCA
CGTCaaaggaaaaaaagtcagttcttttaaataactttcgaactactttt
tcaaatttaatgtataatagctcaaaattcaagtttgaGTATCCTCttta
cgataaaaaaagaatggacaaaaaatttaaatcctgaatgCAGGCTCTAT
TTGGGAAAAAGAAGACTCCTGAGCAAATGCTCAGACAACATCAACGTACT
TTGACAAGATCAATAAGGGATTTAGATCGAGAGAGAACAAAGATGGAAAA
TCAAGAGAAGAAAGTTATCAATGACATAAAAAAGATGGCTAAAGAGGGTC
AAATGGATGCGGTGAAAATTATGGCCAAAGATTTAGTAAGAACAAGAAGA
TatgtcaaaaaattcattcTAATGAAAGCGAATTTACAAGCAGTTTCCCT
CAAAATACAGACACTTCGGTCCAATAATGCAATGGCCCAAGCAATGAAAG
GCTGTGCAAAGACCATGGCAACAATGAACAAACAGTTGAAGTTAccacaa
attcaaaaaatcatgATGGAATTCGAAAAACAGTCAGAAATTATGGACAT
GAAGGAAGAAATGATGAATGACGCAATCGATGACGTCATGGGTGATGAAG
ACGATGACGAAGAAAGtgACGCCATCGTATCTCAAGTGCTGGATGAATTA
GGTCTTGGATTAACCGACCAGTTATCCGAGCTTCCAGGAGCAGGAGGGAA
ACTACCAGCTGGTCAGAAAGCACCAAGTGGTCAACAAGCAGTTGCTGCTG
GGGGTGGTGAAGATGATGATTTACAAAATAGGTATGTCACAGTATTGCAA
CTTTTCTCTCGGTGGACGGAAATATGTTCAGTTCAAATTTCGGATCACCG
AGATTTCAAACTAGGAGTGTTattatcttcgctttctgatttgatcTACT
CCCCCCCCCCTCTTCAGAATCATTTAAGGAAAAAAAGTAGTTggagctcc
agcttctggactaaaggccggtctccacttgcgcgcgctgcgatcgcact
ttttggcttcaattctttttgcttggaCACGTCaaaggaaaaaaagtcag
ttcttttaaataactttcgaactactttttcaaatttaatgtataatagc
tcaaaattcaagtttgaGTATCCTCtttacgataaaaaaagaatggacaa
aaaatttaaatcctgaatgCAGGCTCTATTTGGGAAAAAGAAGACTCCTG
AGCAAATGCTCAGACAACATCAACGTACTTTGACAAGATCAATAAGGGAT
TTAGATCGAGAGAGAACAAAGATGGAAAATCAAGAGAAGAAAGTTATCAA
TGACATAAAAAAGATGGCTAAAGAGGGTCAAATGGATGCGGTGAAAATTA
TGGCCAAAGATTTAGTAAGAACAAGAAGATatgtcaaaaaattcattcTA
ATGAAAGCGAATTTACAAGCAGTTTCCCTCAAAATACAGACACTTCGGTC
CAATAATGCAATGGCCCAAGCAATGAAAGGCTGTGCAAAGACCATGGCAA
CAATGAACAAACAGTTGAAGTTAccacaaattcaaaaaatcatgATGGAA
TTCGAAAAACAGTCAGAAATTATGGACATGAAGGAAGAAATGATGAATGA
CGCAATCGATGACGTCATGGGTGATGAAGACGATGACGAAGAAAGtgACG
CCATCGTATCTCAAGTGCTGGATGAATTAGGTCTTGGATTAACCGACCAG
TTATCCGAGCTTCCAGGAGCAGGAGGGAAACTACCAGCTGGTCAGAAAGC
ACCAAGTGGTCAACAAGCAGTTGCTGCTGGGGGTGGTGAAGATGATGATT
TACAAAATAGGTATGTCACAGTATTGCAACTTTTCTCTCGGTGGACGGAA
ATATGTTCAGTTCAAATTTCGGATCACCGAGATTTCAAACTAGGAGTGTT
attatcttcgctttctgatttgatcTACTCCCCCCCCCCTCTTCAGAATC
ATTTAAGGAAAAAAAGTAGTTggagctccagcttctggactaaaggccgg
tctccacttgcgcgcgctgcgatcgcactttttggcttcaattctttttg
cttggaCACGTCaaaggaaaaaaagtcagttcttttaaataactttcgaa
ctactttttcaaatttaatgtataatagctcaaaattcaagtttgaGTAT
CCTCtttacgataaaaaaagaatggacaaaaaatttaaatcctgaatgCA
GGCTCTATTTGGGAAAAAGAAGACTCCTGAGCAAATGCTCAGACAACATC
AACGTACTTTGACAAGATCAATAAGGGATTTAGATCGAGAGAGAACAAAG
ATGGAAAATCAAGAGAAGAAAGTTATCAATGACATAAAAAAGATGGCTAA
AGAGGGTCAAATGGATGCGGTGAAAATTATGGCCAAAGATTTAGTAAGAA
CAAGAAGATatgtcaaaaaattcattcTAATGAAAGCGAATTTACAAGCA
GTTTCCCTCAAAATACAGACACTTCGGTCCAATAATGCAATGGCCCAAGC
AATGAAAGGCTGTGCAAAGACCATGGCAACAATGAACAAACAGTTGAAGT
TAccacaaattcaaaaaatcatgATGGAATTCGAAAAACAGTCAGAAATT
ATGGACATGAAGGAAGAAATGATGAATGACGCAATCGATGACGTCATGGG
TGATGAAGACGATGACGAAGAAAGtgACGCCATCGTATCTCAAGTGCTGG
ATGAATTAGGTCTTGGATTAACCGACCAGTTATCCGAGCTTCCAGGAGCA
GGAGGGAAACTACCAGCTGGTCAGAAAGCACCAAGTGGTCAACAAGCAGT
TGCTGCTGGGGGTGGTGAAGATGATGATTTACAAAATAGGTATGTCACAG
TATTGCAACTTTTCTCTCGGTGGACGGAAATATGTTCAGTTCAAATTTCG
GATCACCGAGATTTCAAACTAGGAGTGTTattatcttcgctttctgattt
gatcTACTCCCCCCCCCCTCTTCAGAATCATTTAAGGAAAAAAAGTAGTT
ggagctccagcttctggactaaaggccggtctccacttgcgcgcgctgcg
atcgcactttttggcttcaattctttttgcttggaCACGTCaaaggaaaa
aaagtcagttcttttaaataactttcgaactactttttcaaatttaatgt
ataatagctcaaaattcaagtttgaGTATCCTCtttacgataaaaaaaga
atggacaaaaaatttaaatcctgaatgCAGGCTCTATTTGGGAAAAAGAA
GACTCCTGAGCAAATGCTCAGACAACATCAACGTACTTTGACAAGATCAA
TAAGGGATTTAGATCGAGAGAGAACAAAGATGGAAAATCAAGAGAAGAAA
GTTATCAATGACATAAAAAAGATGGCTAAAGAGGGTCAAATGGATGCGGT
GAAAATTATGGCCAAAGATTTAGTAAGAACAAGAAGATatgtcaaaaaat
tcattcTAATGAAAGCGAATTTACAAGCAGTTTCCCTCAAAATACAGACA
CTTCGGTCCAATAATGCAATGGCCCAAGCAATGAAAGGCTGTGCAAAGAC
CATGGCAACAATGAACAAACAGTTGAAGTTAccacaaattcaaaaaatca
tgATGGAATTCGAAAAACAGTCAGAAATTATGGACATGAAGGAAGAAATG
ATGAATGACGCAATCGATGACGTCATGGGTGATGAAGACGATGACGAAGA
AAGtgACGCCATCGTATCTCAAGTGCTGGATGAATTAGGTCTTGGATTAA
CCGACCAGTTATCCGAGCTTCCAGGAGCAGGAGGGAAACTACCAGCTGGT
CAGAAAGCACCAAGTGGTCAACAAGCAGTTGCTGCTGGGGGTGGTGAAGA
TGATGATTTACAAAATAGGTATGTCACAGTATTGCAACTTTTCTCTCGGT
GGACGGAAATATGTTCAGTTCAAATTTCGGATCACCGAGATTTCAAACTA
GGAGTGTTattatcttcgctttctgatttgatcTACTCCCCCCCCCCTCT
TCAGAATCATTTAAGGAAAAAAAGTAGTTggagctccagcttctggacta
aaggccggtctccacttgcgcgcgctgcgatcgcactttttggcttcaat
tctttttgcttggaCACGTCaaaggaaaaaaagtcagttcttttaaataa
ctttcgaactactttttcaaatttaatgtataatagctcaaaattcaagt
ttgaGTATCCTCtttacgataaaaaaagaatggacaaaaaatttaaatcc
tgaatgCAGGCTCTATTTGGGAAAAAGAAGACTCCTGAGCAAATGCTCAG
ACAACATCAACGTACTTTGACAAGATCAATAAGGGATTTAGATCGAGAGA
GAACAAAGATGGAAAATCAAGAGAAGAAAGTTATCAATGACATAAAAAAG
ATGGCTAAAGAGGGTCAAATGGATGCGGTGAAAATTATGGCCAAAGATTT
AGTAAGAACAAGAAGATatgtcaaaaaattcattcTAATGAAAGCGAATT
TACAAGCAGTTTCCCTCAAAATACAGACACTTCGGTCCAATAATGCAATG
GCCCAAGCAATGAAAGGCTGTGCAAAGACCATGGCAACAATGAACAAACA
GTTGAAGTTAccacaaattcaaaaaatcatgATGGAATTCGAAAAACAGT
CAGAAATTATGGACATGAAGGAAGAAATGATGAATGACGCAATCGATGAC
GTCATGGGTGATGAAGACGATGACGAAGAAAGtgACGCCATCGTATCTCA
AGTGCTGGATGAATTAGGTCTTGGATTAACCGACCAGTTATCCGAGCTTC
CAGGAGCAGGAGGGAAACTACCAGCTGGTCAGAAAGCACCAAGTGGTCAA
CAAGCAGTTGCTGCTGGGGGTGGTGAAGATGATGATTTACAAAATAGGTA
TGTCACAGTATTGCAACTTTTCTCTCGGTGGACGGAAATATGTTCAGTTC
AAATTTCGGATCACCGAGATTTCAAACTAGGAGTGTTattatcttcgctt
tctgatttgatcTACTCCCCCCCCCCTCTTCAGAATCATTTAAGGAAAAA
AAGTAGTTggagctccagcttctggactaaaggccggtctccacttgcgc
gcgctgcgatcgcactttttggcttcaattctttttgcttggaCACGTCa
aaggaaaaaaagtcagttcttttaaataactttcgaactactttttcaaa
tttaatgtataatagctcaaaattcaagtttgaGTATCCTCtttacgata
aaaaaagaatggacaaaaaatttaaatcctga
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_007733XLOC_007733Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013838-exon-sc0000174-1491911889:319427..319515TCONS_00013838-exon-sc0000174-1491911889:319427..319515Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1510915933:319427..319515TCONS_00013838-exon-sc0000174-1510915933:319427..319515Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1575043694:319427..319515TCONS_00013838-exon-sc0000174-1575043694:319427..319515Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1491911889:326710..326818TCONS_00013838-exon-sc0000174-1491911889:326710..326818Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1510915933:326710..326818TCONS_00013838-exon-sc0000174-1510915933:326710..326818Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1575043694:326710..326818TCONS_00013838-exon-sc0000174-1575043694:326710..326818Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1491911889:327121..327208TCONS_00013838-exon-sc0000174-1491911889:327121..327208Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1510915933:327121..327208TCONS_00013838-exon-sc0000174-1510915933:327121..327208Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1575043694:327121..327208TCONS_00013838-exon-sc0000174-1575043694:327121..327208Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1491911889:327543..327647TCONS_00013838-exon-sc0000174-1491911889:327543..327647Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1510915933:327543..327647TCONS_00013838-exon-sc0000174-1510915933:327543..327647Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1575043694:327543..327647TCONS_00013838-exon-sc0000174-1575043694:327543..327647Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1491911889:327920..327970TCONS_00013838-exon-sc0000174-1491911889:327920..327970Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1510915933:327920..327970TCONS_00013838-exon-sc0000174-1510915933:327920..327970Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1575043694:327920..327970TCONS_00013838-exon-sc0000174-1575043694:327920..327970Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1491911889:328338..328409TCONS_00013838-exon-sc0000174-1491911889:328338..328409Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1510915933:328338..328409TCONS_00013838-exon-sc0000174-1510915933:328338..328409Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1575043694:328338..328409TCONS_00013838-exon-sc0000174-1575043694:328338..328409Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1491911889:329583..329665TCONS_00013838-exon-sc0000174-1491911889:329583..329665Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1510915933:329583..329665TCONS_00013838-exon-sc0000174-1510915933:329583..329665Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1575043694:329583..329665TCONS_00013838-exon-sc0000174-1575043694:329583..329665Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1491911889:332953..333007TCONS_00013838-exon-sc0000174-1491911889:332953..333007Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1510915933:332953..333007TCONS_00013838-exon-sc0000174-1510915933:332953..333007Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1575043694:332953..333007TCONS_00013838-exon-sc0000174-1575043694:332953..333007Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1491911889:333572..334420TCONS_00013838-exon-sc0000174-1491911889:333572..334420Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1510915933:333572..334420TCONS_00013838-exon-sc0000174-1510915933:333572..334420Clytia hemisphaericaexon
TCONS_00013838-exon-sc0000174-1575043694:333572..334420TCONS_00013838-exon-sc0000174-1575043694:333572..334420Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00013838-proteinTCONS_00013838-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000174supercontigsc0000174:319427..334420 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.4819	27.2814	18.6228	71.7283	35.5823	29.174	51.3704	57.1996	57.9278	55.1562	24.5305	22.2349	41.6246	46.5903	39.8816	7.03993	43.4348	51.7598	40.8265	49.5834	5.30265	35.2032	29.6777	33.8835	44.7794	46.7675	28.5836	0.516974	0.543009	0.335021
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR005024Snf7_fam
Vocabulary: Biological Process
TermDefinition
GO:0007034vacuolar transport
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007034 vacuolar transport
Blast
[Close]
BLAST of TCONS_00013838 vs. Swiss-Prot (Human)
Match: CHM2A (Charged multivesicular body protein 2a OS=Homo sapiens GN=CHMP2A PE=1 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.491e-85
Identity = 147/189 (77.78%), Postives = 172/189 (91.01%), Query Frame = 2 
Query:  119 MQALFGKKKTPEQMLRQHQRTLTRSIRDLDRERTKMENQEKKVINDIKKMAKEGQMDAVKIMAKDLVRTRRYVKKFILMKANLQAVSLKIQTLRSNNAMAQAMKGCAKTMATMNKQLKLPQIQKIMMEFEKQSEIMDMKEEMMNXXXXXXXXXXXXXXXXXXXXXQVLDELGLGLTDQLSELPGAGGKL 685
            M  LFG++KTPE++LRQ+QR L R++R+LDRER K+E QEKK+I DIKKMAK+GQMDAV+IMAKDLVRTRRYV+KF+LM+AN+QAVSLKIQTL+SNN+MAQAMKG  K M TMN+QLKLPQIQKIMMEFE+Q+EIMDMKEEMMNDAIDD MGDE+D+EESDA+VSQVLDELGL LTD+LS LP  GG L
Sbjct:    1 MDLLFGRRKTPEELLRQNQRALNRAMRELDRERQKLETQEKKIIADIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNSMAQAMKGVTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEEESDAVVSQVLDELGLSLTDELSNLPSTGGSL 189
The following BLAST results are available for this feature:
BLAST of TCONS_00013838 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CHM2A1.491e-8577.78Charged multivesicular body protein 2a OS=Homo sap... [more]
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