TCONS_00014632 (transcript) - C. hemisphaerica

Overview
NameTCONS_00014632
Unique NameTCONS_00014632
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3108

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00014632 ID=TCONS_00014632|Name=TCONS_00014632|organism=Clytia hemisphaerica|type=transcript|length=3108bp
GCCTATCATCACGGCGAGATGAGCTTGATGGGTACAATCATCAACTTGGC
ACAAAATTACGTTGGTAGTAATAATTTGAACATCTTGGTGCCGCACGGTC
AATTCGGTACCCGGCACATGGGTGGTAAAGACAGTGCCTCCCCTCGTTAC
ATTTGCACCATGATGAGCTCGCTAACCCGTCTCCTATATCCTGTACATGA
CGACTACGTTTTGAATTTCCTATCCGAAGACAACCAAAAGATTGAACCAG
AATGGTACTGTCCTATCATTCCCATGTGCTTGATTAACGGTGCAGAAGGC
ATTGGTACAGGATATTCTACCAAGGTACCTAACCACGATGTCAGAGAGGT
GGTGGAGAATGTCAGGCGAATGATCGCCGGTGAAGAACCACAAGCTATGA
AACCGTCTTACAAGAATTTCACTGGTACCATCGAACATGTGGAAGGACAG
AAATACCACTGCACTGGTATCGTCAACGTCATCGACGAAAACACGATTGA
GATCACAGAATTGCCCATCAGAACATGGACACAACCATACAAAGAAACCG
TCATGGATGTCTTTCTGTACGGAACCGATAAAGTACCAGCATGCATTACA
GACTACAAGGAATACCACACGGACACGACCGTCAAATTTTTGGTTTCCAT
GACGACAGAACAATTGAACAAAGCAGAAGACGAAGGCTTCTACAAGAAAT
TCAAGTTGGAGAGCAACATGCTTCTCAGCAATATCGTGTTATTCGACCAA
TACGGATGTCTCAAGAAGTACAACAATACATTGGAGATTCTTCAAGAGTT
TTACGGCATTCGTTTGAAGAAATACCAAGAACGTAAAGACTTCTTGGTGG
GAATGTTACAAGCTGAAGCAAGTCGGTTGGAAAACCAAGCTCGTTTCATC
ATGGAAAAGATTGAAGGAAAGATCATTATCGAGAACCGCACGAAGCGGGA
TGTGATAACCAAACTGGTGGAGCGTGGTTTTGATTCTGATCCAgtcaaga
tttggaaaaacaaaGTATCGAAAGACACTGCTGCGGTTGATGATGAGAGT
GAAGCACCGGTCACCGATTATGCAAGCTCGACTTCGACTACCAGTGGTGG
CCCTGACTTCCAATATTTGTTGAGTATGGCCATCATGAGCTTGtccaaag
aaaagaaagatGAACTGCTGAAGCAAAGAGACCAAAAGaaagaaGAGCTG
GACACCTTGCTCGCCAAAACACCAGAAGAATTGTGGTCAACTGATTTGGA
TGTCTTTTGTGAAGAACTCGATCGAGTCGAAGAGCAAGAAAAAATGGACG
ATGCTGCTTCTGCTGCAATGTCAAAGAAGGCCCAAGGGCGACTAGGAGCC
GCCTCTAAAAAAGGCCGTAAGGTTAAGGTCGAGAGCCGTGACATCAAGAA
AACGTTTGACAAGAAACCCAAAGAGCCATCGAAAGCCGCCCTCAAGAAAG
TGAAGGACGCCTTTGGTTTTGACACTGATTCGGTGAAGAGTGAAGATACG
GCTAGCGTTACATCTAAAGCATCTGAGAAACCGGCATCCGAAATCTCTGA
ACCTCTATCATTGGCTGATCGATTGAAGAAAAAGAAACAATCGACATTAT
CATTCAAACCATCAAACGCTAAGAAATCAAAGAAGAAGCTCGGTAGCGAT
AGtgaaagtgaagatgaaaagaTCGAAGATTTCTCCGACGATAGCGACAA
TGATAACGACGACGGTGACGATGATGACGAATATGTTCCAAAAGCCACCA
AAACGAGAACTGCTAAAAATaaaaagaaaCTTGTGATTGACGATTCTTCA
GATAGTGACGTCGACATAAAGCCCGACGATGATGACGACGAAAATCCCGA
TGTCGCTGAAACCAGGGCATTAATTGAGCGCCTCACGcccaaaaaagaca
aaaagaaagccGCCTCGTCACGTGACAGCAACGAAGGAGAAGCCGCTAAG
AAAGACATCTTTGGTGGTGGTGAAGGATCCAGTGCTGATCCTATCTCATT
AGAAGATTCGCCCAAAAAAGATTCTCCAAAGAAGACGAAGAAAGCTACTA
CAAAAGCTGCGGCTGGTGGAAGCAAGAAGGAAACGAAATCTAAGAAAACG
GCTGCTTCAAAGGCCAAAGAAGAccccaaacaaaagaaattatcgTTTGc
caccaaaacaaagaaaacttcTACGGAGAAATTTGAAATGAGCGATGACA
GTGATATTGAAATCGCTCCACCTCCTGCCAAGAAGAAAGCGACAACCTCT
TCTGCCGCTaCAAAGAAGAAGAGCACCGCAACCAAATCAACGAAATCCAG
TAGTGTAGCAGTGAAGAGGAAAACTAACTCAAGTGATGATGATTCTGCAA
GTGAAGATGATAAGCCCGCAAAGAAAACCAAAACTACAAAAACCAAAACA
ATGCCGAAATCGAACAAAGTTCGTAAAGTTGCTTACACCGTCAGTGACGA
CGACGATGAATCATTTGTCGCCGATGAAAAAGTCGAACCTCTACCCGCCC
GTGATCGTGCAGGTGGACGAAGGGCGGCCGCTGCTAAAAAGACATACACT
TTCTCGTCtgacgatgatgatgacgacgatgatgatgatttcTGCTGATT
TCTGCGTTGTTTGCCTCGATGACCTTTTGACCAAAGGTATGCCATTTGTA
CTTTCGAATTGGCCAAATGAGGCGGTGTCTTAAATGGATTTACTTTCTAT
TATAAGGCACCGTCTGGTTTTTCTGGCGATGATCACAAGATTGTTGTTTT
TGTAATGATGAGAAAACGCAGACCAGCTTGTAGACCTTTTTCTTTAGTAC
TTTGGAAAAGTCGAATAACAGAAAGATGGAAAAAACATTTCACGATATTT
ATTCCCTTTATTTTAGCAattacgttttttttttgttttaatgtctttca
taaaatttaaaatttttaaacactTGCGCGTATGAAATTTCTTCATGTTT
TATGATAACAGAAGATGCAAGAATAGTATTTTAATATTtggtaaaatata
aatatttcaaaagattttacttGTAAATATATAAGTCTTGCTAATGCTAA
GAATTATAAGTTTTGTTCTAAAAACCTTTTCTCATTATTATACCCAGTTT
ACACAacg
Run BLAST on NCBI

transcript from alignment at sc0000191:273620..282183-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00014632 ID=TCONS_00014632|Name=TCONS_00014632|organism=Clytia hemisphaerica|type=transcript|length=8564bp|location=Sequence derived from alignment at sc0000191:273620..282183- (Clytia hemisphaerica)
GCCTATCATCACGGCGAGGTAAGAACTGAACTCCCTCAAACAAAGCCGGA
GAAACTTGTATCTTTTTTTGTCGAAATACAATTGACTCTCGCTAATTCGA
ACTCGAATGGGGAATCGTACCCGTTCGAATTACAGAAATTACTTTAAGAG
GGTCTCTATCCTTGACAGGGACTGGAAACAAGTTCGATTTATAGAAAGAT
TCGAATAATAGAAGTTCGAATAAGCGAGAGTTTACTGTAAGCAGGCATTT
TGTCAAAAAGAAAGAATATTTCCTTCTCTGTGACGTGCACCAAAACTGTT
GATGATGATCATATGTGTGAATGAAATCTGCAATAGTACCGTAACTTTAT
CTCGTCTATAGACAGCAAACTGTCCGGTAGAGATTTCTAAATTAGGATTT
GCACTCACAAGGAGTTTTTGTTAAAGATTCGTCAAGATTCCCGTTAAAGC
TCGCAAAAGCTATTAGATGCAATGTACAACATTCCTTCAGACCACCGAAG
AATCTCTTGGCTTATTATTATGTTTGACTTTGTTATCAATATCAATTATA
ATATTTATAACCAAACCTCTTTAGATGAGCTTGATGGGTACAATCATCAA
CTTGGCACAAAATTACGTTGGTAGTAATAATTTGAACATCTTGGTGCCGC
ACGGTCAATTCGGTACCCGGCACATGGGTGGTAAAGACAGTGCCTCCCCT
CGTTACATTTGCACCATGATGAGCTCGCTAACCCGTCTCCTATATCCTGT
ACATGACGACTACGTTTTGAATTTCCTATCCGAAGACAACCAAAAGATTG
AACCAGAATGGTACTGTCCTATCATTCCCATGTGCTTGATTAACGGTGCA
GAAGGCATTGGTACAGGATATTCTACCAAGGTACCTAACCACGATGTCAG
AGAGGTGGTGGAGAATGTCAGGCGAATGATCGCCGGTGAAGAACCACAAG
CTATGGTAAGTGAAGTGGAATACTTTGATACGAGGAAAGTCAAAATCCTT
CATTTCTTTATTTTGCAATAACGAGAAATTTTCTTCTGTGTCATTTATTT
TGTCAACGGATTCTTAACTTAAGAAAAAGAGAAGAATGACAGTTTGTAAA
GCACTTGAAGTTATGGCTTTGTCTTTGCATTCAATCTTTAACCGTAAAAT
ACTAAGGGACATATTTCGCTGCAGCTGACGCATGCAATGGGCTTTTCAAA
ACACCTCACCACGGTAATTTATCGTTTTTTTATAAGAACTCTTTATAATC
ACCATTCCCGCGTTCCCGTCTTCAAGTAAAGGCAGACGTCTGCTCGTCTA
GCTAAAACGATGATTTAACCAAATTGTTTGACGTGTTATGCATTTTGGTA
TGTGTTAATCTTTCTGTGTAGAAACCGTCTTACAAGAATTTCACTGGTAC
CATCGAACATGTGGAAGGACAGAAATACCACTGCACTGGTATCGTCAACG
TCATCGACGAAAACACGATTGAGATCACAGAATTGCCCATCAGAACATGG
ACACAACCATACAAAGAAACCGTCATGGATGTCTTTCTGTACGGAACCGA
TAAAGTACCAGCATGCATTACGTAAGTTTGCACTAAACTATTCCCTCAGT
ATATTGATGCAGTAGTGTAGTGGTCAACCTCGACCGCTGTCCAGGAGGTC
TGGACTCGATTTTCACTCATTGCTTGCTGTGATTCACTTAACAAGTGAAT
GTACCTTCGTGCCATGTTAGGGGAATAGGGTAGACAGGAACTCAAGAAGC
CTGTTGTGGACTGCTAGGTATCCACAATACTCTGTGAATGAGGAAGTGAG
AGAGAACTGGCCTTTTCCCCTAGTGGTTCACGCCCGATCAACGCACTTGA
AAAAACTGTGCATCAGTTGTTCGTCAGTTGTAACAATACAAGTTTTAATG
TAACTAGCCAATTAGTTATATCACGGTCAAAATCCAATACCTGAGATTTA
TATTTCTAGAGACTACAAGGAATACCACACGGACACGACCGTCAAATTTT
TGGTTTCCATGACGACAGAACAATTGAACAAAGCAGAAGACGAAGGCTTC
TACAAGAAATTCAAGTTGGAGAGCAACATGCTTCTCAGCAATATCGTAAG
AATGCTTCTCGTTATCTATTTTTATTACTTTTCTTTCTATAATAAACTCC
ACAGATAATTCATCTTTTGCCGACTTGAAATTTCTTGTTCTGGTAATAAG
TCCTCTCAGATTTAGATTAAAGTGTATGAAAACACTCGATCAAAATCGAA
TGAACCAAAGAGAATATAAAAACAAATGTTTTGAATTTTTACACTGTTGG
GCATCCTTTACGATCAAAACTATATTTCCAAAGCTTTGCTCCTAATGTTA
TCTTGAATATCTCTGACTCTCATAAGGCCGTCACCCGACCCTAGATTTTG
GAGTTTACATTTGCGTTATTTTGAAATGAAAACGTGAGAGCTAGAGAAAA
AGAAAATTCAAAAAGTGTTTTTTTTTTCAAGTTCACAATTCATTCTAAAA
CTGTTTCTTAATAGTTAAGTTACTCCTTGAATATATCACTATAGGTGTTA
TTCGACCAATACGGATGTCTCAAGAAGTACAACAATACATTGGAGATTCT
TCAAGAGTTTTACGGCATTCGTTTGAAGAAATACCAAGAACGTAAAGACT
TCTTGGTGGGAATGTTACAAGCTGAAGCAAGTCGGTTGGAAAACCAAGCT
CGTTTCATCATGGAAAAGATTGAAGGAAAGATCATTATCGGTAAGCTTTT
GTCGGTCGTTTGTCCCTTTTGGTATAATATTACATAGTTATATAGTTCGG
AGTCTACTAGTATTGTGTAGTTTGGAGCAATTTTTCTAAACGATGTCAGT
CGAATGGAATCGACATTTATATCGATCGAATTATACTGCGATCGTCAGAT
TCCATTGCAATTTTACAATTCAATTTGATAAAAGACATACACTGAACTTT
ACCTTCGTTTTCATTTTAAGAGAACCGCACGAAGCGGGATGTGATAACCA
AACTGGTGGAGCGTGGTTTTGATTCTGATCCAGTCAAGATTTGGAAAAAC
AAAGTATCGAAAGACACTGCTGCGGTTGATGATGAGAGTGAAGCACCGGT
CACCGATTATGCAAGCTCGACTTCGACTACCAGTGGTGGCCCTGACTTCC
AATATTTGTTGAGTATGGCCATCATGAGCTTGTCCAAAGAAAAGAAAGAT
GAACTGCTGAAGCAAAGAGACCAAAAGGTACTTTCAAATGAGAAGTTGAC
TCCTTGATTATCTGGAAACCCATTTTCGCAAAATTCATTGGCCTTTCGAT
ATCAGACCAGGCTCATTCATCAAAATTCAAAGTTACTTGACGTTTGTTGC
ATTAACTTAGTTGACTTCAGCTGAGCTAACAAGAAACTTTCTGATTTTTT
TTCATATTATTTGAATTTTTTATTTTTTTTTTGTAGAAAGAAGAGCTGGA
CACCTTGCTCGCCAAAACACCAGAAGAATTGTGGTCAACTGATTTGGATG
TCTTTTGTGAAGAACTCGATGTAAGTATTTAGTCACTAATGTTTGGATTA
ACGTGTCATTAAAACAGTTTCATGGTCGTCCAGGGCTACCTGTGCTCTTA
TCGGTCAAATGCAAAAATGGTTAAAGGGGATTTTTAATCAACCGAAAACT
ATTTTCAGCGCGAATCCAGAATCGTCGCGAAAATGCTTCTTATTAAAGAA
TGCATTTTTCCATTATTTTTCCATATTTATTTTAGCGAGTCGAAGAGCAA
GAAAAAATGGACGATGCTGCTTCTGCTGCAATGTCAAAGAAGGCCCAAGG
GCGACTAGGAGCCGCCTCTAAAAAAGGCCGTAAGGTTAAGGTCGAGAGCC
GTGACATCAAGAAAACGTTTGACAAGAAACCCAAAGAGCCATCGAAAGCC
GCCCTCAAGAAAGTGAAGGACGCCTTTGGTTTTGACACTGATTCGGTGAA
GAGTGAAGATACGGCTAGCGTTACATCTAAAGCATCTGAGAAACCGGCAT
CCGAAATCTCTGAACCTCTATCATTGGCTGATCGATTGAAGAAAAGTATG
TTATTGAAAAATGATTGCATTACTGGATAGCCTAGCATAGCCATTATAAT
TTGAACTATTGATGTGTCAATTTTGAAAAGTCCAAGCAGTTAGCCTATAC
TAGACGTTCACGGTTGGATAATTCTACTCTGATTCTCGTTGGGGGCGGGG
ATGACAGAATTAGACAAAACAGTTAATTTTTCTAGCACTCGTATTACACT
AAAAAAAGACGGACGCCACTCCAATGCAGTAGTCTCCCTTTTGCGCAAAC
CGTCTGAATGAAACTTACCATTAAGGTTTTAAAGATTGGTTATTGCATTT
AACTAGTTTTTGTCTGATTTTTCTCGGAGGTTTTTCAAAAAAGGCATGTG
TAAGACATGTAAGACTTTTTGGCAGTAGGTAGTGGAGACAGGACATGTTC
ACGCTGTCAATTTTGATATATTCTCTCCCCTTCTTTCACTTCAGAGAAAC
AATCGACATTATCATTCAAACCATCAAACGCTAAGAAATCAAAGAAGAAG
CTCGGTAGCGATAGTGAAAGTGAAGATGAAAAGATCGAAGATTTCTCCGA
CGATAGCGACAATGATAACGACGACGGTGACGATGATGACGAATATGTTC
CAAAAGCCACCAAAACGAGAACTGCTAAAAATGTACGTTACACACACTAA
ATTTTGCCAATATTTTGGTGCAAGTTTTTATTTCCAATTTTAAATTGGCT
CTTTTTAATCCATCTTTATGAAAGTGTTTGATCCATCCTCCACCTTGCTT
AGATGATGTGATGTTATTCTTCCACTTTGTCAATAAAACTTCTCTACTTT
CTTGCTCTTCATTTAGAAAAAGAAACTTGTGATTGACGATTCTTCAGATA
GTGACGTCGACATAAAGCCCGACGATGATGACGACGAAAATCCCGATGTC
GCTGAAACCAGGGCATTAATTGAGCGCCTCACGCCCAAAAAAGACAAAAA
GAAAGCCGCCTCGTCACGTGACAGCAACGAAGGAGAAGCCGCTAAGAAAG
ACATCTTTGGTGGTGGTGAAGGATCCAGTGCTGATCCTATCTCATTAGAA
GATTCGCCCAAAAAAGATTCTCCAAAGAAGACGAAGAAAGCTACTACAAA
AGCTGCGGCTGGTGGAAGCAAGAAGGAAACGAAATCTAAGAAAACGGCTG
CTTCAAAGGCCAAAGAAGACCCCAAACAAAAGAAATTATCGTTTGCCACC
AAAACAAAGAAAACTTCTACGGTATTCTATTTTTTTACTCAGCTTGATGT
TTTACCTCGCGGTTTCCAGAAAAAGAAAACAGGTGTTCTTCGAGAAAAGG
TCGACAACATACCCTGGCACCGCAAAGATTAGTTCGCTTAACGCATTTCC
TTCGTATTTTTTTGCATTGTGAGTTTTGCATCAGGAAGGATGCGGACGGC
ATGAGCCTTTTCCTGTTCTACCTATTCATAATAGGGACCTTGTGCTCGCG
ACACAGCAGAGCCATGGCGTAGCGATAACATTACTCTAAAAAGCGGGAGA
GAACGATTGTTCTCGGGAGTGCTTATTCATTTGAGCAAAGATACCATCAA
AGATGCAATGTCCTGCACACCTCCCCACACTCTAATATCAGAGTACGGTA
CCCAATTCCCCTCACATGGTATAGGTAAACCCGGCCGAAGTACAGCCCCT
TGCTAAGTGAATCGTTGTAGCACCGAATGGGAATCAAACCCATGCCTCCC
ATATCGGAGTCGAGAACGATACCCACTATATTACAACACCTTACACCAGT
TTATAATTAATTCCATTTTATTGCTTATCTTCTTCAGGAGAAATTTGAAA
TGAGCGATGACAGTGATATTGAAATCGCTCCACCTCCTGCCAAGAAGAAA
GCGACAACCTCTTCTGCCGCTGTATGTACACCATTCTTAAATTCTAACCC
AGGAATAGCATCGTCTTTACCCTGAACTTTTTGCATGTAATGTGCAAACA
CGGACCTTTGGGATCTATTTGACCAATCAGGAAGTGCCCGACGCCACAAT
ATTTATTACTCGAGCATTTTGTTTATTATTTGGGATCCTGAATATGAATT
AAAAAATACAGGACTTCATAGATGATTTAAGGACCTATCAATTAAATCAG
CAATAGGATCCTGTATTTCTGGAGTTTCATTCCAAATTGGTGACAATACC
CTGTTTTTCTTTTCTCAGACAAAGAAGAAGAGCACCGCAACCAAATCAAC
GAAATCCAGTAGTGTAGCAGTGAAGAGGAAAACTAACTCAAGTGATGATG
ATTCTGCAAGTGAAGATGATAAGCCCGCAAAGAAAACCAAAACTACAAAA
ACCAAAACAATGGTAAATTTCATTCATTTAATTTCCTAATTCCATAATTT
CCTTATAACAATACCTTACTACGTCGCGGTTAACCTGGTTATGTCTTTTG
ATACTTCAAAAAGTTTTAATCGACCATACCTGATAACGGTCTGAATGGAA
TTGTTGGTACTAACTGCTTCACAATTTCAAACAGAGGCGCGAAAATGCAC
GAAATTATACGCAATGTTAATTCTTCGAAAAACTCGTGTAATTACCAAAA
GAATGATATGGCATTTGGTGCCCCAATTAATTTTCTTCTACAATTTTGAG
CTTTCGGTCCGGATTTACCAAAGCTTATTGCAACACGGAGTATACCTTGA
GTGGATTAATCTTCGCTAGCAGATACCTTAAGGGAAGAAATTTTCGCGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATT
TAATTTCGCGAATTACACCCAAATTCGCGAAATTAAATTCCGCGAAAATT
TCTTCCGCGAAAATTTCTTCTCGCGAAAATTTCTTCCCTTAAGGTATCTT
CGCGAGACAACTTTTTTCAAAAATATTTGCGGGACTTATTTTGCAGGGAT
AAAATTTTGCGAATCAGCCTCTTTTTGGCTGAATTTCTTTCATTTTCACA
GGGGTTTTTGGCAAGAACACAGTTTTTAGAAACACCAAAGATTTTAGAAA
TTCCCACGAGTATTAATTTTTGCTGATTTTCAGTAAAACTTTTGAAACTC
GCGAAATATAATCCTCACATAAATTAAACCATTGTAATTTTCTCATTCTT
CCATTGCAGCCGAAATCGAACAAAGTTCGTAAAGTTGCTTACACCGTCAG
TGACGACGACGATGAATCATTTGTCGCCGATGAAAAAGTCGAACCTCTAC
CCGCCCGTGATCGTGCAGGTGGACGAAGGGCGGCCGCTGCTAAAAAGACA
TACACTTTCTCGTCTGACGATGATGATGACGACGATGATGATGATTTCTG
CTGATTTCTGCGTTGTTTGCCTCGATGACCTTTTGACCAAAGGTATGCCA
TTTGTACTTTCGAATTGGCCAAATGAGGCGGTGTCTTAAATGGATTTACT
TTCTATTATAAGGCACCGTCTGGTTTTTCTGGCGATGATCACAAGATTGT
TGTTTTTGTAATGATGAGAAAACGCAGACCAGCTTGTAGACCTTTTTCTT
TAGTACTTTGGAAAAGTCGAATAACAGAAAGATGGAAAAAACATTTCACG
ATATTTATTCCCTTTATTTTAGCAATTACGTTTTTTTTTTGTTTTAATGT
CTTTCATAAAATTTAAAATTTTTAAACACTTGCGCGTATGAAATTTCTTC
ATGTTTTATGATAACAGAAGATGCAAGAATAGTATTTTAATATTTGGTAA
AATATAAATATTTCAAAAGATTTTACTTGTAAATATATAAGTCTTGCTAA
TGCTAAGAATTATAAGTTTTGTTCTAAAAACCTTTTCTCATTATTATACC
CAGTTTACACAACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008188XLOC_008188Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00014632-exon-sc0000191-1575043694:282166..282183TCONS_00014632-exon-sc0000191-1575043694:282166..282183Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1575043694:281229..281609TCONS_00014632-exon-sc0000191-1575043694:281229..281609Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1575043694:280613..280812TCONS_00014632-exon-sc0000191-1575043694:280613..280812Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1575043694:280089..280224TCONS_00014632-exon-sc0000191-1575043694:280089..280224Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1575043694:279444..279639TCONS_00014632-exon-sc0000191-1575043694:279444..279639Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1575043694:278957..279213TCONS_00014632-exon-sc0000191-1575043694:278957..279213Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1575043694:278664..278747TCONS_00014632-exon-sc0000191-1575043694:278664..278747Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1575043694:278139..278448TCONS_00014632-exon-sc0000191-1575043694:278139..278448Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1575043694:277502..277689TCONS_00014632-exon-sc0000191-1575043694:277502..277689Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1575043694:276913..277317TCONS_00014632-exon-sc0000191-1575043694:276913..277317Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1575043694:276263..276346TCONS_00014632-exon-sc0000191-1575043694:276263..276346Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1575043694:275822..275965TCONS_00014632-exon-sc0000191-1575043694:275822..275965Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1575043694:273620..274324TCONS_00014632-exon-sc0000191-1575043694:273620..274324Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1510915933:282166..282183TCONS_00014632-exon-sc0000191-1510915933:282166..282183Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1510915933:281229..281609TCONS_00014632-exon-sc0000191-1510915933:281229..281609Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1510915933:280613..280812TCONS_00014632-exon-sc0000191-1510915933:280613..280812Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1510915933:280089..280224TCONS_00014632-exon-sc0000191-1510915933:280089..280224Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1510915933:279444..279639TCONS_00014632-exon-sc0000191-1510915933:279444..279639Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1510915933:278957..279213TCONS_00014632-exon-sc0000191-1510915933:278957..279213Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1510915933:278664..278747TCONS_00014632-exon-sc0000191-1510915933:278664..278747Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1510915933:278139..278448TCONS_00014632-exon-sc0000191-1510915933:278139..278448Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1510915933:277502..277689TCONS_00014632-exon-sc0000191-1510915933:277502..277689Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1510915933:276913..277317TCONS_00014632-exon-sc0000191-1510915933:276913..277317Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1510915933:276263..276346TCONS_00014632-exon-sc0000191-1510915933:276263..276346Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1510915933:275822..275965TCONS_00014632-exon-sc0000191-1510915933:275822..275965Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1510915933:273620..274324TCONS_00014632-exon-sc0000191-1510915933:273620..274324Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1491911889:282166..282183TCONS_00014632-exon-sc0000191-1491911889:282166..282183Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1491911889:281229..281609TCONS_00014632-exon-sc0000191-1491911889:281229..281609Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1491911889:280613..280812TCONS_00014632-exon-sc0000191-1491911889:280613..280812Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1491911889:280089..280224TCONS_00014632-exon-sc0000191-1491911889:280089..280224Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1491911889:279444..279639TCONS_00014632-exon-sc0000191-1491911889:279444..279639Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1491911889:278957..279213TCONS_00014632-exon-sc0000191-1491911889:278957..279213Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1491911889:278664..278747TCONS_00014632-exon-sc0000191-1491911889:278664..278747Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1491911889:278139..278448TCONS_00014632-exon-sc0000191-1491911889:278139..278448Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1491911889:277502..277689TCONS_00014632-exon-sc0000191-1491911889:277502..277689Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1491911889:276913..277317TCONS_00014632-exon-sc0000191-1491911889:276913..277317Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1491911889:276263..276346TCONS_00014632-exon-sc0000191-1491911889:276263..276346Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1491911889:275822..275965TCONS_00014632-exon-sc0000191-1491911889:275822..275965Clytia hemisphaericaexon
TCONS_00014632-exon-sc0000191-1491911889:273620..274324TCONS_00014632-exon-sc0000191-1491911889:273620..274324Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000191supercontigsc0000191:273620..282183 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.50807	7.85422	29.9862	36.9337	30.0651	13.6369	4.95318	8.43019	6.37422	8.79573	9.82187	4.05333	2.72034	3.46813	6.57	6.36277	14.5824	10.8616	2.11204	3.07232	5.01707	3.73234	7.501	4.05357	9.01283	8.78326	4.5204	2.86473	4.4488	3.84489
Blast
[Close]
BLAST of TCONS_00014632 vs. Swiss-Prot (Human)
Match: TOP2B (DNA topoisomerase 2-beta OS=Homo sapiens GN=TOP2B PE=1 SV=3)

HSP 1 Score: 502.286 bits (1292), Expect = 2.123e-154
Identity = 255/430 (59.30%), Postives = 333/430 (77.44%), Query Frame = 1 
Query:    1 AYHHGEMSLMGTIINLAQNYVGSNNLNILVPHGQFGTRHMGGKDSASPRYICTMMSSLTRLLYPVHDDYVLNFLSEDNQKIEPEWYCPIIPMCLINGAEGIGTGYSTKVPNHDVREVVENVRRMIAGEEPQAMKPSYKNFTGTIEHVEGQKYHCTGIVNVIDENTIEITELPIRTWTQPYKETVMDVFLYGTDKVPACITDYKEYHTDTTVKFLVSMTTEQLNKAEDEGFYKKFKLESNMLLSNIVLFDQYGCLKKYNNTLEILQEFYGIRLKKYQERKDFLVGMLQAEASRLENQARFXXXXXXXXXXXXNRTKRDVITKLVERGFDSDPVKIWKNKVSKDTAAVDDESEAPVTDYASSTSTTSGGPDFQYLLSMAIMXXXXXXXXXXXXQRDQKKEELDTLLAKTPEELWSTDLDVFCEELDRVEEQE 1290
            AYHHGE +LM TI+NLAQN+VGSNN+N+L P GQFGTR  GGKD+ASPRYI TM+S+L RLL+P  DD +L FL +DNQ++EPEWY PIIPM LINGAEGIGTG++ K+PN+D RE+V NVRRM+ G +P  M P+YKNF GTI+ +   +Y  +G + V+D NT+EITELP+RTWTQ YKE V++  L GTDK PA I+DYKEYHTDTTVKF+V MT E+L +AE  G +K FKL++ +  +++VLFD  GCLKKY    +IL+EF+ +RL  Y  RK++LVGML AE+++L NQARFI+EKI+GKI IENR+K+D+I  LV+RG++SDPVK WK   +++ AA +DE++    D +SS S T  GPDF Y+L+M++ SL+KEK +EL+KQRD K  E++ L  K+P +LW  DL  F EELD+VE QE
Sbjct:  777 AYHHGEQALMMTIVNLAQNFVGSNNINLLQPIGQFGTRLHGGKDAASPRYIFTMLSTLARLLFPAVDDNLLKFLYDDNQRVEPEWYIPIIPMVLINGAEGIGTGWACKLPNYDAREIVNNVRRMLDGLDPHPMLPNYKNFKGTIQELGQNQYAVSGEIFVVDRNTVEITELPVRTWTQVYKEQVLEPMLNGTDKTPALISDYKEYHTDTTVKFVVKMTEEKLAQAEAAGLHKVFKLQTTLTCNSMVLFDHMGCLKKYETVQDILKEFFDLRLSYYGLRKEWLVGMLGAESTKLNNQARFILEKIQGKITIENRSKKDLIQMLVQRGYESDPVKAWKE--AQEKAAEEDETQNQHDD-SSSDSGTPSGPDFNYILNMSLWSLTKEKVEELIKQRDAKGREVNDLKRKSPSDLWKEDLAAFVEELDKVESQE 1203
The following BLAST results are available for this feature:
BLAST of TCONS_00014632 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TOP2B2.123e-15459.30DNA topoisomerase 2-beta OS=Homo sapiens GN=TOP2B ... [more]
back to top