TCONS_00015008 (transcript) - C. hemisphaerica

Overview
NameTCONS_00015008
Unique NameTCONS_00015008
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length300

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00015008 ID=TCONS_00015008|Name=TCONS_00015008|organism=Clytia hemisphaerica|type=transcript|length=300bp
gaaatccaaaatatttgtttatctcagcaaaaaagaacaataagCCGATA
TCTGGTCTGATACGAAATATGTGCTTAACATGAAACGGGAATACTTATGT
TAGTACATAACCTATAGTACACAACCTTTAAATATAACGGTTTTTGTGTA
TATGGTTTTTCCAatgtaaaataaagtttggtttttccttagcctgtacc
aaaccctACTTCTTTACGTAGCTGACGATAGTAGTGTTTGTTACGTTTAG
AGAGATTTTGTGTGAAGCGTGTTTTCAAAAAGCCTCTAAGTGAAGTGCAA
Run BLAST on NCBI

transcript from alignment at sc0000201:395873..396172

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00015008 ID=TCONS_00015008|Name=TCONS_00015008|organism=Clytia hemisphaerica|type=transcript|length=300bp|location=Sequence derived from alignment at sc0000201:395873..396172 (Clytia hemisphaerica)
TTGCACTTCACTTAGAGGCTTTTTGAAAACACGCTTCACACAAAATCTCT
CTAAACGTAACAAACACTACTATCGTCAGCTACGTAAAGAAGTagggttt
ggtacaggctaaggaaaaaccaaactttattttacatTGGAAAAACCATA
TACACAAAAACCGTTATATTTAAAGGTTGTGTACTATAGGTTATGTACTA
ACATAAGTATTCCCGTTTCATGTTAAGCACATATTTCGTATCAGACCAGA
TATCGGcttattgttcttttttgctgagataaacaaatattttggatttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_008401XLOC_008401Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00015008-exon-sc0000201-1491911889:395873..396172TCONS_00015008-exon-sc0000201-1491911889:395873..396172Clytia hemisphaericaexon
TCONS_00015008-exon-sc0000201-1510915933:395873..396172TCONS_00015008-exon-sc0000201-1510915933:395873..396172Clytia hemisphaericaexon
TCONS_00015008-exon-sc0000201-1575043694:395873..396172TCONS_00015008-exon-sc0000201-1575043694:395873..396172Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000201supercontigsc0000201:395873..396172 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.529224	0	0	3.15015	0.96153	0	0	3.17165	0	4.52087	0.518575	0.61712	1.07559	0.352702	0.237243	0	0.168226	0	0.465958	3.06697	2.07232	1.83392	1.19832	0	0.373055	2.4435	0.988603	3.61387	1.54674
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00015008 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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