XLOC_037876 (gene) - C. hemisphaerica

Overview
NameXLOC_037876
Unique NameXLOC_037876
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_337:77645..87862-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_037876 ID=XLOC_037876|Name=XLOC_037876|organism=Clytia hemisphaerica|type=gene|length=10218bp|location=Sequence derived from alignment at scaffold_337:77645..87862- (Clytia hemisphaerica)
AAAAAACACAAAATCTAATCTGAATCAAAAAAGTTTCCTCAGGTATGTTT GTAAAAATCTTGATCTTTTTACATCTTTTAAACATTAAAATTTAAAGTCA CAGTTTTTTTCGAAAGACATTTGTGTAACTTTAATTTAAGCAAAGAAACT CACAAACAAGCTTCGAATGTTCCTAACATCAGGTCATGATGAGACACATC TCTGCTTGTTAAATTTTTAATTAATAGTTTGTTCAAAATCAATACAGCTC TGCAATGTTGGAATCAATCAAATCATTGACATCAGGTAATACTTAATACA ACAGGATTCAATCCTGGANGTCATGATGAGACACATCTCTGCTTAAACAG ATATTTTTAATAGAATTATTAATAGTTTGTTAAATTTTTAATTAATGGTT TGTTCAAAATCAATACAGCTCTGCAATGTTGGAACCAATCAAATCATTGA CATCAGGTAATACTTAATACAACAGGATTCAATCCTGGAATGAAATTTGA TTCTTAAGATTCAATCCTCATCCCTATCCTATCTTAGAAAAAGTTGTGCA TTAATATCATACTTTGAAGATTTTGTAAATCGTAATCAGTTGCCTTGAAT TCATCAGTTCATATAAAAACTTTTTCACAACTTTTGTGTGAATTTAGCAT GATTATATCTAATTATCAGAATTCAGTTGAATATAATTGACCAGCTGTTG ATAGATAAAATGAAAGACGATCCTCCTGCGATGTCAAGTTATATATTTTT TAGATTCTTCACTATCTAATGACATTGACATGGGCATTGCTGATGAAGAA CCAATTGTGTCATCTTCGGAAGGTATTTTTCAAATTTTAGTGACAGAGTT GATCTCAGTTGATATAAATAAGGAATCATAATTAACTATTGATTTTATCT GTTTTTGATCTGGAAATTTCCCATTCATTTCTCTAGACCCCTCAACATAT CCGCCATCAACAAGTACACGACACGCAGATGCCATGTTTCGGGAAGGTAT TCCAACTGTTCATATTCTGTTTACACTTGTTTCGTTCGCAATTATTTTTT TCATTATTTTATTTCTCAATTTTAAGAGTTAAAATTCAAAAGTCATTTTT GCCAGGTAGATACTAATAAGACACAAACTAATTTTAGCAATTTGTATTTC ACTCTTCAATTTTTTTCTTGAAAACATTAATTCATATATTGTTTTTATGT TTAATCACACAAAGGTATCAACAATTCAACATTAATCGCCTCTGACAAAA TAATCAAAACGAGTGAAGCATGCCATCTTATCCACTCTATAGATGAGAAG TTGGAAGCTGCTTCTCACAAAAGCTATCTGAGTTTGTTGTCGTGTGAGCA GAGTCTTCTTAACTTATCCAGCTGCGATGAAACGGGTGGACTATTTTTTG CTTGCACGTTCGAATTAATCAAAGAAAAAACTATAATGACGCGTTATCTT GAGCATGGCTCCTACTCTGGCTACTACAGGTAACTTTGATCCCTCTTTTG GAAACCCCTAGCGTATTAATGATATTTATTACAAAAATAAAATCAGAAAA TAACCATGAAATTGAAATAACTATTAGCCGTATAACTATGTTCAAATATC GAATTAGTTTAGCTTCTTTACTAAATGTTTGTAGTAATGCTTCTGTTTCT TTATTGTTTTTCGTTTTAGAAGTTACGGCGAAGCTTTAATAAACAACAAA CTGGAATGTAGGACATTGTCATTGAAATCATTTAACGCTGCTGATGTCGC GAACGACCGACTAAGAAAAGATATGATACGAAAGAAATTGAAAAAAACTA AAGGTATAATTTTCTTCTTACTTAATTCTTTTACTATTTAGATCAAAATG ATTTCTTTTAGCAGCTAAAACATTTGTGAACTTATTTCAAAAACTTATAA AGGGAGGGAGGGTTTCGTTCTTTGCAGAATATCCCCGAGAATATCTTATG ATTTCTTTTTAACACAATGGGCATTACTGGTTCTAGTACCAAGATGGATC AAGAATAATGCATGAGTCGGTTACTTACTTGATTCTTTTAGGATCCTCAA GACAGCGTGGGTATTATTCCAACAATTTAAGGAATAACAAGACGAGTGTT GTAAACTGTCTCAAAACCTTATTATCGGAATTAGAGGCTTCGAGTGAAAT CCGAACTATTGGCTGTGTCGTACTAGTGGATAAGGCAACTACAAAAACAA ATGATTCCGACAACAGGTAATTTTATTGATTAATCATATTCAATTTTTTA TTAAATATTAAAAAATAATTTACAACTACTGATATATCCTGATACGATTA ACCGCTTTCTGGTCTGTCATAGGTTTTTTGTTAGTTAGTTTATGGAATCA TCATCAATATTCCTCTGCTCTGCTCCAGCAGTATTTTCTAACCTCCGCAT CTATTAGAGATCAGAAATTAGATATTCGTATCAGTACAAAACAGTGACTG CTACTAACTAAAACGCCATTATACCAACAGTTATTCTCTATGATGATCTT TTGGACAGCAGGCTAACTTTTACTTTTATGAAGATAAGGTTTTAAAGGCT AAAAAAAGTTTTTTGACATATATTATTGATGTCATATCTAATAGGACGAT TTATAAGTGTATTTTTCAGATTACAACGTTTTTTGACAGTTACAAAATTT GCTTTTTATACTTTTTTCTTTGACACATGACATATTATGACACCTTACGT TACCTACGAGACATTTTACACAACAGACATCCCGTTTTTGGTAAGTTCTA CAGTTAAATATCTTCAATTTCTTATTTGAACGATGTACTTCAACAGTACC TTTTAATCATCTGAAATACATTCATTCAAATTGAAATGCAAACTACTCCG TGTTGCTTATTCTTTCCTATTCCTATCACGATTCCAACAATTTTAACTAT TCTTGTTTGTCAAGCCGGAGAAGTTCTCGACCGTATCACTTTAAGATATA CCCTATTTCCTGAATATTCGCCGAATAGAATTTTTAGAATATAGAATGAA CAAAATATCTGACATCTGTTTTCGANTGAATATTCGCCGATGAATAGAAT TTTTAGAATATAGAATGAACAAAATATCTGACATCTGTTTTCGAAATTTT TGGGGAATTTTTGGCTATTTAACTTTTGACCTGAAATCCACATCAAAGTA ATTTCTAATCAAACCTATAGTGTCCGGTGTGTGAGGATTGAACCGACAAA TTGACTGTTGTGATTTGTATTTCTTGTCCTTGATCCTTGAGCATCAATAG TAGAAGCTCCAAGACACGGGATAACATTTAGCCTTGTTACCTTTTAACAT TTAGCATTTTAATAAGCGCTTATAACGCTTATAAGCATATGAAGGTTTAG ATTTGCAGAATTCCTAAGCATAGCATAATCTTATATATCAGTCTGAAACA TTTTGTTGTCATTTTTTTATCTGTTGAAAAAGGTTTGGTAGAGGTCAAGT AAAAAATAAGACATTCCACGGCTAGCTACATTCCACCGCTCCCAAAAACT GAACAAACTTTTACAAAATTTCTGAAAATTCACTAAAAACTTGGCTCGGG GTGATTCATAAGGATATAATAAGCTATGCATGGATGCTTTGAGAACTTAA GCATACACGAGCCTGACCAAGGGGCTTACACTTGCTTATAAAAAAACATG TACATAAAAAGTGAATAATTAAGTCGAAAGAACCTATTTTGATAAACTAT TCTATGGCAGGTTGAAAACTCTGCAGTATTATGTGCCCGCCCAACGCAAA CCGCAAACCCCCGTTGTGTATAATACAAGCAAAAATGAATTTTGATAATA GTAGATTGAATTAAATTTAGCGTGGATTAATTTTCCCGATTTCGGAGAAA TGTAGTCCTCGCGAATAACTTAAAATCCGAGTTTTGGCCAAAACCCCTAG GAAAATGAAAGAAATCATACAAAAACTAACCCACTTAAGGTACATATTTT AACAGATACATTTAAGGTACAAGTTTTTGGTAACGAAACAATGATCTCTA TTGATTAAGAACAATAGAAAGTTAAGCAAATATAATCCGAGCCCTAATTA GGGGTAGACACATTGTATTTGTAGTGCGCAAGGGAAAAAATAGTAGGCAT ACTTATTTTTGCATAATTCGTCATCTACGTAGTTCTCGGTTCACTTGCAC CGTAAAAAACGTACAACCTGTCGGTAGTTTTACGATTCATGGTTTTACCA AAGAAACAACAACATTTAAAATACATCTTGAATAATGAAGTGTCGATCTT TTCTTATTCAGGTATTTGTCGAGCCAGAGAGACTTCGATCAAGGCATCGA TTGGGAAGCAAGTCTTGTTGCTTATAAGCTCCAAAATTTAAATTCATCCG AAGAAGCGGAATCAATATTCCAGAAAAGTAATTATACGGGTCCATTGTCT CTACAAGAGCAATTAGACATTTTATCTGAGATACCAAACAATCATTATTA TCTTTGGTCGCTGGCCAAAGATCCTGCTGAACAACAAGTTAAATTTGCTC AACGCTTTTCCACGTCTACGAAATACCCGTGTAGTTCGCCAAGAAACAGA ATTATAAATACCGTTGTGTTTAACGCAACACCTAGTAATATCATTAATGC CCTTCATGTTATGCTTGATTTATACAATGATTCTGATGTCAAAGGCCCAC CTTCGAAGAGAAGAAAGTGCGTGTTTGACAAAAAGAAAAGAGTCGTCGTT GACACTCCATACATTTGTAACCACCTTGGTATTGACGAGGAGGAAGTCTT AGAATTATCCAAAAACATCTCTTCAATCGCAACACAGAAAAACAAAGACG AGAAACTCTATCTGCATTACGTGGAAAAACTTTTTTCATCAGGCTGTTTG AATTGGAGAGTATTAAAGGCTCCATCTCTTCAAATAATTTTAATGAACAA CATTGATCCGATGACTGGTGAATTTAAGGTAAGTCAGTGCTGAGCAGGAT CTTGGGCTCTTTTTATGGGAATCCAAGCCGATAAGCCCAAGGGACTTCGA ATGGATTTTTGTGTATTTCGTTTTTTTGGTGCGTTTTTATTTCTTGGGCT CTTTTAATGGGAATCCGAACCGATAAGCCCAAGGGACTCGAATGGGTTTT TGTGTATTTCGTTTTTTTAGTGCGTTTTTATTTCTTGGGCTCTTTTAATG GGAATCCGAACCGATAAGCCCAAGGGACTTCGAATCGATTTTTGTGTATT TCGTTTTTTTGGTGCGTTTTTATTTCTTGGGCTCTTTTAATGGGAATCCG AACCGATAAGCCCAAGGGACTTCGAATCGATTTTTGTGTATTTCGTTTTT TTGGTGCGTTTTTATTTCTTGGGCTCTTTTAATGGGAATCCGAACCGATA AGCCCAAGGGACTTCGAATCGATTTTTGTGTATTTCGTTTTTTTGGTGCG TTTTTATTTCTTGGGCTCTTTTAATGGAAATCCGAGCCGACAAGCCCAAG GGACTTCGAATGGATTTTTGTGTATTTCGTTTTTTTGGTGCGTTTTTATT TCTTGGGCTCTTTTAATGGGAATCCGAGCCGACAAGCCCAAGGGACTTCG AATGGATTTTTGTGTATTTCGTTTTTATTTCTTGGGCTTAACTACTCTAT GGGAATCCGATACCATTAGACCATGCAGGGAAGAGTTGTCTTTTATTTCT AATCTTTTTTACTTTAGGATAAAGATTTTGTGCACGTGACAATCAAAGGA ACGACGACAGGTCCAATCATCACTTGCTCCTGCGCAGTGTTCGACCTCCT GCAGTCCACAGTAAACGAAGAAGATGTAAACGGTTCAGTGGGTTTTCGAG GCTTGAAATGCTGTCATTCTCGGCTCGCAGAAGATTTACTCGTCCTCAAA CCCATGAATTTCGTGCCGAATGAACTTGAGGAAACTTCAATAGGGAGACA TTATTTTAATGCAGATTCAATTTCCAAGGCAGAGGAATCCGTTAATATGC CAATCCTACAGCTACCTGGAAAAATAAACGTTTTCAGGTTCGCTGTAGTA ATCGAAAACAATGAGGCGGAACTGATTACGATTTGCAGGAATAAAAAGGG ACACAACACAATAACGTGTCACAACTCCTATTGCCGTTCAAAAATTTCCA AGGAGCGGTACTTGGATACGTTCCAAAAATCTGATAACCTTTGCCCACAC CTTGAGTTTCTAAGGAGTTCTTTTGATGTGACCACCCTGAGGTTCACAGA AGGTGTGCAGGACGAAGATGAAAATGAAAATGAAAATGAAAACAACAACG ACAACGACATGGAATGTGATGATTTTGTATCCGACGCTGAACCTATTGAG GTACTGCTCGCTTTACAAACTTTAAATCTTAATTACAAAATACACTAAGG TCAAATAAAGGGCTGAATATGATAAAAAAAAACACAATATTGATATTAAT AACAAAATAACCAAATCTGGGTGTCTAATCCACACACTATCATAGTGTAA CCATAGAACTATCATCAGATAGAATAAATACAAGCTTTTTTCCTCAAAAT GAAGCGTGTCTATAAGGGGTCCCTTAGCTGCAATGGGAATTCTATTATAC GCGTGTAATAATAATTTCTTTGTTGCTATCGTATATTAATTACATATTTT CACATTCTTGATCAGAACATAATTTGATTATTTTCAAATGGAAATTTAGG GCACATCGGTCTCATCAGTAAAAATAAAAATTATGTATTCGAAATCAGCT ACTTTCATAGATTCATCAGTGGTGAAAACTATTTGAAAACGCACTCCTTA GGAAAGAAATCTAGCTGTCAAGTTTTCACCTAAATTAGTCATTCCTTCCG NCGTTATTCCATCTCATTTTAGTGGGAAAAGGTGTTCGACGAAGATACTG GTCGATGGAAATTCCATGAGAAAGCTCCAAGCGTTTGGCGCGTCAGCGAT AAGAGGGACGAAATTTATCAAGAAAACATCAAAAGGCGGGCAATACAAAT TTTACTTGGTCAGGAAATCAAACTCATTCCATCAAAGAATGGTAATTGTG GATGTGAGGTAAGCTTAATTTACGTTTTTCCAATGTCAATGTAATCAAAT CAAAGTTAGTTATAAAATCTATGAAAATCTTGTGGATTAAAAGTTAACTG ATTTGATTTTATTTTAATGCAAAAGAACCAATTGTTGTGTCGACAGCCTA TTGCGTGATACCATTTTTTATAAGCGCAGTCATATCATATCCACTTCCAT GAAAGTCATTCTAACATTTCATAACAAGTTTTATCTTGTTTATTTAGGGT GGATGGTACAACGAAGAGAATCCAGACGGTCATATAATGCCTCGCGGGGA AACTATCGTTTACTCTACCATGGGTGCAGCCAAAGGTCGACTTTACGAGC GAGCGTGTATGGGTGGCAGCTGCTTTCGGGACTATGACGGGTCTGAAGAC AGTTTGTTTCGATCTAGCACAACAGTTGCCTGCGGGTACGAAATAGGCTG GGAGTTCGTGGACAGCGTAATGACCAGCAAACAAACATTTTCAGGGTTTG TCAAGGTTGTCAAAAATAGGTACACAGACTACCAGTCTCCATGTGAATTT ATGTCCAGGAACACTCTGATCAAGTGGTGGTTCAGCTGGGCTTCAGCAAT GGATCTGGACTTTGTTAAAAAATGTCCGAGTTGTGGATCAGATCCAAAGT ACCTGGCCGCCGATGCCACAAAGATCGGAATTACATTTAAGCAGATTAAT GTGACGCCAATTGAGCAGCCTGTCGGAGATTCTTTTCCTACAAAAAGAAG GAGATATGACCGAACCTTCATTAACAACCGCAACAGTAAATCAAGAATAG TCGTCAACGAGGCTCTAAATTTAATTTCAAGACATTTTTGTGGCAAAGTC AAGGCCAGTAAAGAAGATTTAGAAGTAGCGAAAAAAACACTGATGAGATC AGAAATCCCTGTGGTGCGTTTAGTGACAGAAAAACTCTTTGAGTGTGATA TCTCAACTCTCGAAAGAACATCATTGAGTAAATTAATAGTGATATTAACC AAAGATACAAGTTTAATTAATCTAATTCCAAAAAGATACCTACCTCAATT TGAAACTTTGAACACTTTATTGGCGTCGGTGAATGCAATCGAAGAGAACA GTGATCTGTGGCGAGTTGTAGAAGAATTCCATCGGTCTTCAAAGTTCTTC TTTCCTGAGCTCGGTGATTGGCTGTTCATCGTAACATCTCTCTCCAAAGG ATCTGCACCTAAAACATACGGAGTTGAATTTCTTAGATATCTTTTTCTTC TAAGAAAAGAGATAATGGATGATGAGGTTCCCCCTGAAGATCCAAGATTA GTCAAGAAATATAATCCTCCAAGAGACGGGAGAGCGTACTATTTTCATGA TGGGGACCAGATTCGGGAAACGAGAAAGTTTAGCGCCGACAAAGACAACA AAAGGTTGGACAACTTTGACGATCTTCCTGACAAAGACGTTTGTTCAAAG ATTTTTCCAACTGCCAAAGGCAGATCCTATTTGTTTTTGTGGTTTTGCCC AGCACACGGGCACTGTTACGGATATCATATAATTCCCCACGCAGAAGGCC GAAAGGATGCTGCAGCGCCTCTATACGCTTTCTTGAAAAAGGCACCATAT GAAATTTTTTATGACTTTGCTTGTTCATTGGAGGAGTATGGTAGGAACAG GGAAAGTGGTTTCTTCCAAGACACCCGCTTTTTCCACGATATCTTCCATG GATATGGACATAAATGTTCTGATGTGTTCAAGTCAAACAGATTGCTTGGA TTCAACGGCTTGAACACATCCATTTGCGAGCAGTTTAACAGTTTTCTGCA GTGCATCAAGACATCAGGGAAACTGATGACACAGGAGCATTTCACCTTTT ATGTCCAATTTTTCATTTACCAATGGAATCTGGCTCGAAAAGACTCGTTT GCAAAAAGAATTGCTGTTGCAATCGCCTGCACCAGATAAAGTTATTTTTA TAGCTACATTCCTTGTAAAACAATTATTTTTATAGCTACATTCCTTGTAT CCTTGTAAAACAGTTATTTTTATAGCTACATTCATTGTAAAACAGTTATT TTTGAATCTACTTTAATGTCAAAAATTTTCGCGGTCAGAAAATCTTTGTT ATTTCGCGAGAATTTTATTTCGCGCATTTGACTTAATGAAATATTTCGCG TTGTGTGTCATTTTCGAATCATGAAGAAAAAGTTTTTGCCTGGTTTTTCT TATAAAGTGGAAAGTGAAAGTATTTGTTTTTGCTCTTTTTTTTATTTTTT CAAAATATTATCACCACATGTTCTATACATGCAATCAAATAGTAATTTAG TACTTTAAGATGGGTGTCAACTGAAAAAAAAATAAGTTCGTCGCAAATAC CTGTTAACAAAAGATAAATCCAGACATATGTATGGAATTAAAAATCTATT GTTGTCTTTTACGGCAAATTAGAAATAATAAACGATATATGGAATGAAAA CGTTTTTCATTTTTCATCGCTTATTTTTTTCGCCCTATCGCAAATAAAAC AATAGGTTTTTAATTTCAGACGTACATGTTTTTTTTTATAATCATACAAA AATCCGAAAACAGGCTCAGAGATGCTTAGGTCGAAAGCTTAATAAGGCTG AAAAATGCTTGAGGGAATGCTTAAATCTAAAGCATAAATTTAGGGAAATA CTAAAAATCCGTAAAATTCCAGCCAAAAAAAGCCGAAATCAGGAAAAAAA CATTTTTCGTAGGCTCAAGTAATGCTTGCTATATGCTTAATTTTTCCCCT TATCTGAGCCTAGATATGCTTATAAGTGCAATGCTTATAAAAAAAAGTTT ATCGTCGCTTTAAGTTCTCTTATATTGGTAGTATTGGACATAAGGCACTC TTATTTTACAGCGACGATATAAGGGTGGAAATAAGAGTGCCTCATGTCAA ATACTACAAACATGAGAATACTTGAACTGCTATTTCCTCAAGATGTCAAA AATGGACATAAGGCACTCTTATTTTACAGCGACGATATATGTCTGGATTT ATTTTTGGCGACAAACAAATTCGCGACGATCTTATTTTTCCGATAGACAC CAAGCTTTAGTGATCTAAAGACTTTCGCGAGTCAGCAATATTTACTTTTT TCGTGACCAGTTAGTTTCGCGAATCGAAGCAAATTCCTTAAAATCGCAGG AATTTCAAGCTGCAAAACTTTTGACGTCAAAGTAAATCCCATGTAAGACA GTTTCTATTATAAACAGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00060208TCONS_00060208Clytia hemisphaericatranscript
TCONS_00060207TCONS_00060207Clytia hemisphaericatranscript
TCONS_00060206TCONS_00060206Clytia hemisphaericatranscript
TCONS_00060205TCONS_00060205Clytia hemisphaericatranscript
TCONS_00060204TCONS_00060204Clytia hemisphaericatranscript
TCONS_00060203TCONS_00060203Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00060208-proteinTCONS_00060208-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_337supercontigscaffold_337:77645..87862 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.36 0.28 0.35 0.41 1.39 0.88 1.93 2.34 1.73 1.33 1.22 1.4 1.13 1.77 0.98 1.17 1.42 1.68 1.25 0.95 1.55 1.79 0.64 0.99 0.17 0.35 1.39 1.1 1.77 1.63