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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00015845 ID=TCONS_00015845|Name=TCONS_00015845|organism=Clytia hemisphaerica|type=transcript|length=635bp
tgGAGCTAATCTTTAGCTAAGGTTAATTCCCAGTCGACTGAGTTACATCG
GGTTGCAGTAAAGGTTAGGATTAGGTATTTCTCGGCTGCCGGTTATCTGA
GTTCCCGTATATATATTCCAAGGGTGTGTTTGCCCTGAGCTTATCTCTTC
ATCTGCAAGTTAAGCTTCCCCTCCCTTCCCTGCCCCTTTTTATCTTTGTT
TTGTTTGTGGTTCTGCCTTTCTCTCCTTTCTTTTCAGATCTTATCCTGCT
ATCAAGGCGTGGTCATTGCAGCTGCAGCGTTGGATCCTAATCTCACGGTT
TTTCCCTAGGCAAGGTTTTTCGACCAGAGAGATTAGGCCATTTGGGATGC
ATCGAGATACCAATTAGTTTCCGGTTACCACGTAACctttggcaattttt
ttttgttagttTATCCAGCTACTTGTTTATAAGTCAAttacccgtcatct
acacgggccTAAGCTGctcccgtcatctacacgggctaAGTTCGctcccg
tcatctacacggacTAAGTTCGctcccgtcatctacacggacTAAGGTCG
ATCCCGTCGTCTACACGGGTTAAGTTTTGCTCCCGTCGTCTACACGGGCT
ATGGTCTCAcacccgtcatctacacgggttAAGTT Run BLAST on NCBI transcript from alignment at sc0000217:177278..178170- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00015845 ID=TCONS_00015845|Name=TCONS_00015845|organism=Clytia hemisphaerica|type=transcript|length=893bp|location=Sequence derived from alignment at sc0000217:177278..178170- (Clytia hemisphaerica)
TGGAGCTAATCTTTAGCTAAGGTTAATTCCCAGTCGACTGAGTTACATCG
GGTTGCAGTAAAGGTTAGGATTAGGTATTTCTCGGCTGCCGGTTATCTGA
GTTCCCGTATATATATTCCAAGGGTGTGTTTGCCCTGAGCTTATCTCTTC
ATCTGCAAGTTAAGCTTCCCCTCCCTTCCCTGCCCCTTTTTATCTTTGTT
TTGTTTGTGGTTCTGCCTTTCTCTCCTTTCTTTTCAGATCTTATCCTGCT
ATCAAGGCGTGGTCATTGCAGCTGCAGCGTTGGATCCTAATCTCACGGTT
TTTCCCTAGGCAAGGTTTTTCGACCAGAGAGATTAGGCCATTTGGGATGC
ATCGAGATACCAATTAGTTTCCGGTTACCACGTAACCTTTGGCAATTTTT
TTTTGTTAGTTTATCCAGCTACTTGTTTATAAGTCAATTACCCGTCATCT
ACACGGGCCTAAGCTGCTCCCGTCATCTACACGGGCTAAGTTCGCTCCCG
TCATCTACACGGACTAAGGTCGATCCCGTCGTCTACACGGGTTAAGTTTG
TTCCCGTCATCTACACGGGCTAAGTTCGCTCCCGTCATCTACACGGACTA
AGGTCGATCCCGTCGTCTACACGGGTTAAGTTTTGCTCCCGTCGTCTACA
CGGGCTATGGTCTCACACCCGTCATCTACACGGGTTAAGTTTTGCTCCCG
TCGTCTACACGGGCTATGGTCTCACACCCGTCATCTACACGGGTTAAGTT
CGTTCCCGTCATGTACACGGGCTAAGTTCGCTCCCGTCATCTACACGGAC
TAAGGTCGATCCCGTCGTCTACACGGGTTAAGTTTTGCTCCCGTCGTCTA
CACGGGCTATGGTCTCACACCCGTCATCTACACGGGTTAAGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00015845-exon-sc0000217-1575043694:177653..178170 | TCONS_00015845-exon-sc0000217-1575043694:177653..178170 | Clytia hemisphaerica | exon |
| TCONS_00015845-exon-sc0000217-1575043694:177278..177394 | TCONS_00015845-exon-sc0000217-1575043694:177278..177394 | Clytia hemisphaerica | exon |
| TCONS_00015845-exon-sc0000217-1510915933:177653..178170 | TCONS_00015845-exon-sc0000217-1510915933:177653..178170 | Clytia hemisphaerica | exon |
| TCONS_00015845-exon-sc0000217-1510915933:177278..177394 | TCONS_00015845-exon-sc0000217-1510915933:177278..177394 | Clytia hemisphaerica | exon |
| TCONS_00015845-exon-sc0000217-1491911889:177653..178170 | TCONS_00015845-exon-sc0000217-1491911889:177653..178170 | Clytia hemisphaerica | exon |
| TCONS_00015845-exon-sc0000217-1491911889:177278..177394 | TCONS_00015845-exon-sc0000217-1491911889:177278..177394 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000217 | supercontig | sc0000217:177278..178170 - |
Blast
The following BLAST results are available for this feature:
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