XLOC_040151 (gene) - C. hemisphaerica

Overview
NameXLOC_040151
Unique NameXLOC_040151
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_407:168242..172820+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040151 ID=XLOC_040151|Name=XLOC_040151|organism=Clytia hemisphaerica|type=gene|length=4579bp|location=Sequence derived from alignment at scaffold_407:168242..172820+ (Clytia hemisphaerica)
ATCTTTAAGCTGGCTCAGcatttttttggtttaaaaaaatgCTGTTTAAG CAATATTTACCAAAAAGAGCAATAGTTgccatttttatataaaatactCC ACTGGTTATCAGATAATGTCTGTGTTGTTAATtgaataccgtcaactgct cttgggactatctgacaaaacatgggacggcaaaatcgaccaccatttca ccgaacctccatagtcatttgatttgagttaatgaacggcgtattaaaaa atacacgatttctctttcgcacccagtaggcttttaaatcaaaatatgaa aaaaaatccgtagtggaacacacgcgaatgtctggaatgaagaagaccat attagtggcaaaacaatggagcgCTTGatgtcactcgcgcggcaagttac acactcattATTTGTTAATCCAATCGGGAGATAGGCGGTTAGGTGGTTAG GCGGCGGGTGTTCTCTATTTCTCCAAtcagcgtccggtcattttgaatga aaacaaaaaagttaaaaagggcgcactatcagtgaaagttatcgtgacat gttatgacagaaattatgattgataaacttggtgaagttatcaaaacaaa tttgttgtcaaagagatttaacagtaagtgaaaatacatgccagatatca acagtcccatgtttcgaccaatcgtcccaagttagagcagttgacggtat taccaaagatttgttgtttgattgtcaaattataatcaaatcaatcaaat atCACGGTAAATTTAAGTTAGATTgtgtttgattgatttgatcACCTTCG ATTGATTGATCCTATTCAATGATGTTAGATATAGGTGTTTGATCTTGTTC AGTTAATTTCAGATTGTTCAATCAAGCGATAAGGCATGTCCGTCTAGTTC ATGTTGTTCAGCCGAAAATAGCACCCTTCCAAAGGTAGACGACTGGAGTC GTTTGTAATCCATGTAATTAATACAGTAATATTGGTGTTGTATAAAAATG TGAGAATTGTTACGTGTCAATATCAGTTTATATGAACAACTGAACTCCCC TGGTGTTCCTGTCTTATAGTGGGATCTCATTCCGGACACGGAAGAGCAAG AGCTTGTATTTTGTACAAAGAGCTTTTCTCAGAACGGAAAGGATTTTCTT GAACGGGTGTGTGAATCAATTTAATCAATCAAAACTTATTCAAATGTAAT CGAACAACTACCTCTTTTTTTTGTAAAGTCCAAAGCTTGGATATTTCCAA CAATGTATTTGAGTCAGCTTGCCTAAGGTGGTAATAGTTGGCAAGCAGTG GTtttgcttcaaaagttttgaaaaagattagGTGGTAATTTCTTTTCCTG TTTTCGTCCCTTTTTTTTACACTATAAAAGAGAATGTCGCTTTGTTTTGA CAAAACAGTTACTTCAAAGTTTTAATtgcttaaaaatatataatatttta tgCTGACACGTGTGCTCTATTAAAAAACGAATTATATAGGAGTTGCTGAA AATAAATTTGGAACAATAAACTCAAGATGAAATTATTTTCACCGTTGACC ATTCTTTTTTGTTTATCACTTGgttatttttcaggattttcctACTTCCT CTCACTGTTTGGACGATGGTTTGCTGACTCCATATTCGGACGTTTCCACG CAATATTTGGTTCCGTTTTGTTCTATAATATTGGCAATGCTGGTATTGTC GTCATAGCTTATATTATGAAGAAGGAAAATTATGATTACTATCCCCATTT CTTCATCATAtcacttatttttatttcactcGGAGCGTCAGGAATGAAAG CAAACATCTCAACATTTGCTGCAAGACAAGTGATTCACTTTGGTGATATA CACGTCCGAAAACTGTTCAATCGTTTTTACTGGTTAATTAACTTTGCAGC TGTAATTTCATGCACATTCGTTGCTTATTTGCAGTTACAAGATTTCTTAT ATGGGTATTTACCTGGACTTTGTGGCACAGTGTTGGCTACTATAATATTT ATCTGCAGTAAACGATATTTTGTGATCAAAAGAAGTAACGGCAGCCATTT AACAGATATATTTAACATTGTGACTCAATCAATAAAGCGTAAATACAAGT TTCAGAAATCAATTTCTGAGGAGATTCCAAAGCACACAACTTTGGATTTG CTAGAGTATGGACATATTATGTTCGGAGGGTCATATTCAACAGATCAGAT TGATATCGTTCGATCATTTTCGAGGATTCTGCTTATCTTTATGACGTTGT TGGTCTACTGGACAATATATTTTCAGGTAAGGGATTTTCTCCTAATTCTT ATTGAAAATCTCTGTTTTAGCCTTCTTTGTTAAAAGTTCATAGTAATTTT GTAAAAGTTCCGATAGGAAAGATAAAGCAAACAATCAAATCACTTAGAGA ATTTCAAACTGctgagaatttcaaaattctttcccagttagttttatttt tcttggaGACAAGGAAAGGATTAAAGAGAAACACATGCTACTTCgatttc aaataatttcaattcAATGTTAATTATGTTTCTTTATCTTTAGATGCCGT CGGTCTTTTTTTTCCAATCGCATTTTTTCGATTTGAAAATTCGAGGATTC CAAATACCGGCTTCTGCAATGAACTTATTTGACACTTTTTCCATTCTTTT GATGATACAAATCATGGAACATTTGGTATACCCTTTCTTTCAATACGtca acattcatctaacaaCTCTACGTAGAATGGGATTCGGATTTTTCTTGGTA ACTCTTTCAATGGTATACGCAGCTCTTATTGAACCATATCGGAGACAGAA TGTGGATTTTCAAAACACGAATATTATAATGAATACAACGTTTCATTGTT CAAATTATACCGTATTATGGCAAGCACCACAATTCGTTTTGATTGGATTT AGTGAATTCTTCACCAGTATTTCCGGTAAGTTTTTTTGTAGGAAAGAAAA GAATAAGAGAGGGATAGGTTATCAGATGTCCCAGTGCTAAAGTTGATAta gttttctttcaataaaagtacATGACTTAAAGTTTCGTGCTTTTGGGTGA AATGTGCTACGGTTTTTTTATGCAGCACAGTGGCCACTTCTCCCTTGTAT ATTGCGctgttctttttttaaatccatacagggggtgaaCGTACCTTTTC AATCCAAAAATAACTCTTGAAAATGTGTGATACCCTCTGGAAAATATGCT AAAataattggaaaaattcttctttATGGGGTGGACGAATTAAAATCAGA TTTTTACACCTTAGAAgtttttgaatattattttcgccctggaaaaatga aaaaagacttTTCTTAGAACTCCCCTGAAACTTCTTTTTaggattacccc ctggaaatgtatggagataaaatggaatggccaaTTATTTACCGTTGAAA ATTAGGTTCTAGTTGTGTAAAAGAACTATGTACCACTGTTACTGTTTAAC aatattttaggtttttgacTCTAAACACGACTAAAGAAAAGCcagtattt cattttttgtgactTTGAGGGACTTGGAAATGAGCCAGAGTTGTTCTTAA TGAAAGATCGTAAGCTAGCACTTGAGTTCAAATAGCACTTTTCTTGTTTT CGTATTCGTAAAGTTCGAGACATCTCTGTCTCACAGCACCGATAGCCccg gggatagaaattctattgttccaagcttaaaaaatccagttgggatggtt ttggattacaatttttccatttaatttcgaatggggatgaaatcaaagtc aatttgcCACTAAGGGTGAAACTGTACGGTATTTTTCCACAGggaacgaa attttggccaaattttgtAGTGTGGCGGGGGTTCCACCGGTTCTGTGACA CGGAGAATGAAAGGTAACAATATATTTCCCTTTCCTTTTTCAGGTTTAGA GTTCGCTTATTCTCAATCACCTCGTTATCTTCAAGGGATCGTCATGTCAT TATTTCTGACTACCTCTGGTCTTGGTGCTTTCTTGGGTGCATTGATCGTC AAATTGACGTCTGTATACAAAAAGGAATGGCTGTGTGAAAACATTAATAA ATGTTCGTTAGAATATTATTACTATCTTCTGGCTGGTTTATCGCTACTAA ACTTATTAATTTTTATGGTTGTTTCGAAAAACTTTTCTTATTCCGTACCA TTTATTGGGACTATTTCACATTCTCGATCGTCCAGATCCTTGGCCACACC TACTGATATTTCTGATATCACAGATTTAGCTTCGGATGCAAATGGCGTAA GTTCACGGATTGATTTGAGTAGACAGTCATCTTTTGAGGATGTCGATTCA ATATCTCGCTCAAGTAACGACTGAACTGGGTCCTTAATTTATTGAATCCT ATTCTATCGCTACAggatttttttacgttttttacccGTACATACTTAAG TGGAAACTCAAATGATTTGCGAAAGAACTAGTAACCTTCGTTGAATTAAA TAAAGGCACGAGTTGGAATATATAGTTTCTGAAAACAACAACATGTATTC ATCCCTCTCAATCAAAAACCCACTCGTCGTGTTATAGTTGTGTTATGGCA GAAACTGGCTTCAATTCAGCATGtctatt
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064039TCONS_00064039Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064039-proteinTCONS_00064039-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_407supercontigscaffold_407:168242..172820 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.22 5.18 2.09 2.26 1.72 1.22 1.15 1.47 1.02 1.39 0.85 1.09 1.01 1.21 2.23 2.23 1.24 1.23 1.94 1.17 1.15 1.21 3.4 3.24 1.85 3.03 0.93 1.02 3.08 2.58