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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020194 ID=TCONS_00020194|Name=TCONS_00020194|organism=Clytia hemisphaerica|type=transcript|length=1078bp
CTCAGgttttaagaaatatttcgtATTCATAAGTATATCTTCGTTTGTTA
TAAagataaaacattaaaataaaatcaaatggTAAATAAAATTGCTAGgg
cagaaaaataatttttatgccgtaaaatgaaaataatagtAGAATTTCCA
GGATGAACACAATTTCGAACAAACTTCTTGGTCTTGAAATGGAGAAAGGG
TGCTTTGTATATAGTCGGTCATCTTTACTTTTCTACAATATGCGCCGGCG
CATTAGAAATGACCAACCCATTCAGCTTCAAGCCAACCCTTTTCAGTCCA
TTTCAAATAACCAAACaaactcaaataaaaacaaactctaTTCTACCACT
GCATACAGCACACGAATaaaaatttcagagaaaaataaaactaaacctaa
aaaaaatatttaaaatctttttggacagtcattttgtaataaaaatgctG
AACGTCAAACTTCTCCAGCAGCAAATTGGGTTATGATAACATGCCAGTGG
TCACAATTTTTATAATATACTACTTACTTAATACAAGGATAACaacaata
atataataataactATATACGCCTCAGGGTTAGTTTAATATTTTGCAATA
TTTACATATGAACATTTCTTGACTTTTTAATTTATTCTATAATATTTATA
AACGGACACCCCGGGAAGTGAGGTGTCCGGGATTTTTCTGGTTCTGGGAT
TTTTTTAATATCTTAGGATTGGTCTCCTTCGGTTCCGGCAACTTGACTTG
TCTTCACTCCatgattttgatctttttgaaaaaagttttaattgttGTTG
GTATTCAGGATCTAACATTTCTCGGTATTCTTTAGGTTCACAGTATACTG
GTTGGTTACTGTAGAACTCTTTGTAGCCTCCTTCTAGTAAATAAAGCTCA
GGATAATAAAGTTCTGGGTAATTCTCTTGGTGAGCATCTCGATCTTTGTT
ACGAAGAAATCGTGACCTGAATGAcagaaaaatatagaaaaaattaatgt
taGTCATTTTCTATAATTTTGCCATACTGTTGGTAGTTAAGTACCATTAA
TTAAATCATTCATTTATGTGGGAGGGGC Run BLAST on NCBI transcript from alignment at sc0000350:494320..495620+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020194 ID=TCONS_00020194|Name=TCONS_00020194|organism=Clytia hemisphaerica|type=transcript|length=1301bp|location=Sequence derived from alignment at sc0000350:494320..495620+ (Clytia hemisphaerica)
CTCAGgttttaagaaatatttcgtATTCATAAGTATATCTTCGTTTGTTA
TAAagataaaacattaaaataaaatcaaatggTAAATAAAATTGCTAGgg
cagaaaaataatttttatgccgtaaaatgaaaataatagtAGAATTTCCA
GGATGAACACAATTTCGAACAAACTTCTTGGTCTTGAAATGGAGAAAGGG
TGCTTTGTATATAGTCGGTCATCTTTACTTTTCTACAATATGCGCCGGCG
CATTAGAAATGACCAACCCATTCAGCTTCAAGCCAACCCTTTTCAGTCCA
TTTCAAATAACCAAACaaactcaaataaaaacaaactctaTTCTACCACT
GCATACAGCACACGAATaaaaatttcagagaaaaataaaactaaacctaa
aaaaaatatttaaaatctttttggacagtcattttgtaataaaaatgctG
AACGTCAAACTTCTCCAGCAGCAAATTGGGTTATGATAACATGCCAGTGG
TCACAATTTTTATAATATACTACTTACTTAATACAAGGATAACaacaata
atataataataactATATACGCCTCAGGGTTAGTTTAATATTTTGCAATA
TTTACATATGAACATTTCTTGACTTTTTAATTTATTCTATAATATTTATA
AACGGACACCCCGGGAAGTGAGGTGTCCGGGATTTTTCTGGTTCTGGGAT
TTTTTTAATATCTTAGGATTGGTCTCCTTCGGTTCCGGCAACTTGACTTG
TCTTCACTCCatgattttgatctttttgaaaaaagttttaattgttGTTG
GTATTCAGGATCTAACATTTCTCGGTATTCTTTAGGTTCACAGTATCCCT
GAAAATAGGAGAAAAGATATTAGTTTCTAGGTTACTTTACTTTACTGCTG
TTTAGATTATCAGACAAAAGGTTGTGAAAGACGCCTCCCAAACTTAACAc
ttatttgaagattttgcacAGCTTTCTATTGAATAACGAAAATGACTCAT
GATATTTAAGTAAGGTTTAAATATTATATCAAACAAAATCTCTATAGAAA
AAAACGATAAAAGATACATACTGGTTGGTTACTGTAGAACTCTTTGTAGC
CTCCTTCTAGTAAATAAAGCTCAGGATAATAAAGTTCTGGGTAATTCTCT
TGGTGAGCATCTCGATCTTTGTTACGAAGAAATCGTGACCTGAATGAcag
aaaaatatagaaaaaattaatgttaGTCATTTTCTATAATTTTGCCATAC
TGTTGGTAGTTAAGTACCATTAATTAAATCATTCATTTATGTGGGAGGGG
C
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020194-exon-sc0000350-1491911889:494320..495163 | TCONS_00020194-exon-sc0000350-1491911889:494320..495163 | Clytia hemisphaerica | exon |
| TCONS_00020194-exon-sc0000350-1510915933:494320..495163 | TCONS_00020194-exon-sc0000350-1510915933:494320..495163 | Clytia hemisphaerica | exon |
| TCONS_00020194-exon-sc0000350-1575043694:494320..495163 | TCONS_00020194-exon-sc0000350-1575043694:494320..495163 | Clytia hemisphaerica | exon |
| TCONS_00020194-exon-sc0000350-1491911889:495387..495620 | TCONS_00020194-exon-sc0000350-1491911889:495387..495620 | Clytia hemisphaerica | exon |
| TCONS_00020194-exon-sc0000350-1510915933:495387..495620 | TCONS_00020194-exon-sc0000350-1510915933:495387..495620 | Clytia hemisphaerica | exon |
| TCONS_00020194-exon-sc0000350-1575043694:495387..495620 | TCONS_00020194-exon-sc0000350-1575043694:495387..495620 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000350 | supercontig | sc0000350:494320..495620 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006470 | protein dephosphorylation |
| GO:1902751 | positive regulation of cell cycle G2/M phase transition |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004725 | protein tyrosine phosphatase activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005622 | intracellular |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:1902751 |
positive regulation of cell cycle G2/M phase transition |
| biological_process |
GO:0006470 |
protein dephosphorylation |
| cellular_component |
GO:0005622 |
intracellular |
| molecular_function |
GO:0004725 |
protein tyrosine phosphatase activity |
Blast
The following BLAST results are available for this feature:
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