TCONS_00020574 (transcript) - C. hemisphaerica

Overview
NameTCONS_00020574
Unique NameTCONS_00020574
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2356

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00020574 ID=TCONS_00020574|Name=TCONS_00020574|organism=Clytia hemisphaerica|type=transcript|length=2356bp
GTTTGGAATCGAATCCACCTGATTATGGATTTTCCATTGATGTCAAACAT
GAAGTTGCAAAATTTATCTATAACGATGGCAAAGGAACAAGATTGACGAA
TGTTCCACAATTCTGTATCAATTCAGCATTAAAGAAAGATCACTGTGTTT
CAACTGTTGCCAAAGAAATTCCTGACTGTgGCTTGGtggatgaaaatgaa
attttcatagCTGTCAAAACATGCAAAAAGTTTCACGATGAGCGTGTCCC
TGTAGTAAAGAAGACAGTAGGCAAACATGCCAAACACATTCGGTATTACA
GTGATGTTGCCGATGAAAGTATTCCTACTGAATATATCGATGTGGGAAAC
ACTGAAAGAGGTCATTGTCAGAAGTTACACAACATTATAAAACGTTCAAC
AGATGAAGAATGGAGAGATAAAGAATGGCTTGTTGTCATTGACGACGACA
CCATTATGAGTTACGATCGGTTACGACGACATTTGGCGTGTTACGAATCC
AAGAAGCCAGTTTTGCTAGGTGAAAGATATGCTTACGCGTTGAATTTTCG
AAAAGCTGGGTACGAGTACCCGACAGGTGGCGGAGGTATGATAATGAATC
GTGCCGCTATCAATGAACTTATAAAGAGTGGATGCAAATGTTACAAAGCC
GATGAACCTGATGATATGTGGCTTGGCAATTGTTTCAACAGAATGCAAAT
ACCTATGGTACATTCAAATTCTCTTCACCAGGCTCGTCCATCTCAATACA
CTAAAGAATTTCTCTCACATCGCTTCCTGGTCTCTTTCCATAAACATCAT
ATGGTTGATCCAATGCAAGTCTACCAAGATTATCTACAAGCCGGGGGTGA
AGATCCAAATGTCCAGTCCGAGAAAGAAGAATTGTAGTTAGaagaaacta
attttttttatatagaaTTTAATTAAGTCTGATTGATGGTGActtaaatt
tcaatattttctagtTTCGAAGCTGTAATATTCTCGATATGCTTATTGAG
GCTTGGGTAAGTCTGACGTTTAGCTTAGGTTCCAACGGAATAAATGCTTT
CGTTCTCATTATTCTTCTATAAAAAGCACACACATACATTTTATAAATGG
AATATCAAGTTTGTCGCCAATACGTCTTGGGGTCAACCTGAATGAAATAA
AGGGAATTGGGCTGTAAAGTCTACCAAGGTTAAATGATGTAATGTCTGAC
GGTATTTCTGTCATATTTTCAAAGATTCAGGGCattaacgttttttttta
ctttttaaaacaCGAACCCAACTTCTTTCGGCATTTGATAAGAAGGTTTG
TGGAAACTGAAACTGCTTGTAAGACTTGCTCATTGCTGCTTGTTCATCGA
GATCCAGACATAAGAATAGGAATTGTTCCCTTGATCTTTCgaaataccga
gtttatgtatgtgtgtttttctgcgacggagacgataaggttctaatttg
actagatcctgaacaactgaggacaacggtaaatcagcaattttaccgtc
ctcgatattgcgggtcaaaactgtgGGTTATTGCAAAACGCTTCAGTCAT
TCTACCGTCATCAatagtgcaaatacataaacccGCTAGCTAATGAAGCT
CATCCACTACCACCTGGAGACTTTAGATTTGGTTTACCACAGTGTGATGG
TTCTTTGTAGGGTTGTGGTGGGGATTAGCCGTACTCAGGGCTTGAATTTT
AACTAAAGGGATTTGGCTTAGATTTTACCTAGGTTTTCCTTAATGAGTTT
TAGGTTTCAGGTGTTTGCAGTATATCGAAATTTAAGTATATTGGTATCCA
GATAGGCTTAACAAAAAAGATTGATAATATTGATTAATATAGGTAATTAA
TATAGGTATAGACATAATATAAATCCTCTAGCATTTTTAGATTCACATAA
TATTATAATGCACATACACATATTATATATAAGAAACTTTATATCTAAAC
ACGTTTAATTTTATTAGTCTTTTAATAATTGCTGATATCTCAACTGGTTA
TAAATAAAACGTCAAcagaggtttttaagtttttgtttttaaataagagt
ggtatcgtttgcttactcatcaattttaattcataagctttttcacattg
aattgacacgggtggggagcaagattggtcagaaagggGAAAAGAAAGga
tctttttttgcttatatcagcttagtacagacactgtcctgatatgaaat
atgtgtctgatatgaaacacgggaacactaaaataaaaaataaaaccttc
aacGACGTTCCAGTTAGGTCTCGGACATCATTTTATATCCCACAAAGTAA
TTTATTTATAGAAACATTTTAGAAGACAAACAATTATTTATTTATGACTT
TGAGAA
Run BLAST on NCBI

transcript from alignment at sc0000358:240328..254007-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00020574 ID=TCONS_00020574|Name=TCONS_00020574|organism=Clytia hemisphaerica|type=transcript|length=13680bp|location=Sequence derived from alignment at sc0000358:240328..254007- (Clytia hemisphaerica)
GTTTGGAATCGAATCCACCTGATTATGGATTTTCCATTGATGTCAAACAT
GAAGTATTCATTAATTCCCAAATAATGTGTCTTTTGAGAGCATATATTTT
TATGATGTGTTATGCAGCATTTTTATTCAGTTGAAGTTAAATGTAGTCAT
GAGAAACTGTGTTTGAAACTCACTACTCAGTTTCAAATCGAATCTACGCA
CCTTGAAAATACTCTCTATTGTTTTTTTGCACAACTGAAAGTTTTTATTG
TTGTAGCTAATTAGTTTAGTACAATTTACATTTTATGTAAATTATTACCC
TTTCTTTTTAGGTTGCAAAATTTATCTATAACGATGGCAAAGGAACAAGA
TTGACGAATGTTCCACAATTCTGTATCAATTCAGCATTAAAGAAAGATCA
CTGTGTTTCAACTGTTGCCAAAGAAATTCCTGACTGTGTATGTATTTCTG
CTTCCTCCTTAGTTTTCTAATTGTAAAGTCCTGTTGTCGAGGATCTCACA
GTAGCGTGGTGGGTCGACCAAAATTTGGGCAAACAGGGGAGAGCAATTCT
CGTAAGTTGGGATTTTGGTGTCCCCTTTTGAAAGTAAAATATGTTTGTAA
AACTTACGCGAGCGAAGCGCTAATTTTCGGGGTATCTTTTTCTATTTTTG
GCTAAAAAAAAGGGCGCACTGGGTGTTTTCTCACTTTTTTGGCCAAAAAC
TGCCATTTCTAGTAATCAGTGGCATCTTTTTGCGCCCTTTGTCATGGCAC
CTCTTTGAAAACCTCCGCTCGGGGGGCATTTGCCCCCCTGCCATCACGAT
GGTAGACACAAGTTAAAACAAACAGAATCAATAGACTGTAAAATGAAAGG
TTTTGGATAAAAATGTGGTGATATAAAGAAAAATAATAGAAGAAATAGTC
AGCCCCCAGCTTTGCCATTGAAATTCCAGGCCCCCTCAAACATATCAGGT
CCCCCCAAATATTTGGCTGTATTTTAGCTCTCGGTTTTCATTTGGATTTT
TTCGGGTGTAACCCACTGACCTTTATATACCCTACCAAGCTTCTCAATCC
CAGCCAAGCCAAATCTTTGATCGGAGTTTTTTGAAAATTGGTACCCTAAT
GGCGGCACTACTCGATAGCGGTGTAAATGCATCGAGAGCGCTAGGTCTAC
TTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAAAGTGACTC
TGAACCGTGAAAAACAGAGTTTATTTCTCTTGATCTGAAGTAAGGCGTTT
TGCGATTTACTTTGATATTTTCATCATGTTTGAAAATTTCTTCAGTTAGA
TCTGATATGTTATTTTTAAATTGGAAAAGTTCTATTGCTAACAACTGAAG
ATTTTTATGGTGGAATTTGATGGCACCGTCTTTCTCTAAAAGCTGCTCAA
AAGTAGATGTATGATCAGAATACACTNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT
TCTGGCTAGCTTTCTTATAAATCGTGTTAATATGTGGCTCAAAAGTCAGA
CAGTTGTCAAAAGTTAATCCTAGGATCTTGCCTGAGTTGCTGTTAAAGAT
GTGTTCATTCTGTATAGTAAGGAAGATTTCTTTGCTGGTATTGTTAGCTA
TCAACTCAGACTTGTCTGCATTTCCTTTCATTTGATTTTGGGTTATCCAC
TCAAAGATGATAGCAGNTCCAACCTGTTCCCAAGAATCAGCTATCACAAA
AGGTGTTGTATCGTCTGCATAATTCAGTACATTTCTATTTTCAAGGAAGT
AGAACAAATCTCTCATGTAGATGTTAAATAGTAGCGGCCCTAGAATGGAT
CCTTGGGGAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNACTTTAACATTATGCCAGGTACTGTAATGGTCGCCAATTTT
CGTTCTTTGCTTTCTATCTGATAGATAGGCTGCTATGAGACCTAAGGCAC
TCCTTGAAAGTCCGTATGCTTCAAGTTTAGCAATCAATAGTTCGTGCGAG
AAGATTATCCTTTATGATTTTCACTGGAATATCTGAGCTTGGCTGTGATT
TTCCTTGAACTAAGTCCTTAATGATTTTCCCTACTTCCTCTTTCGNATAC
AGTTTTCCAAAACTTTTTGTTATCAGTTATGTTGGAATCTTTAAGGTTGG
CAAAGTAGTCTTTCTTAGTCCTCCTAAATAGCGATAAGCAAAAAATTTTT
TGTCTTTTGTATTTTGTTTTATTTTCTTGTGTTTTATTCTTATAGGCAAG
GTTCTTGAGTTTGGATCTTACCATGATGGCTTTTCTCATATCTCTATTTA
TAAAAGGCATGTTATTACCTCTAACCGTTTTATATTTAAAAGGAGCTTGT
TTGTCTAGTTCTTCTATGATACATTTTATTTTTGATTCAAAATCACTGTT
ATCACTATTGATGATCAAATCTAGTTTCATACGAAAAGTATCATTGTTGA
ATGTCCTGTAAGATCGGTATCTGATTGTTTTCGGTGGCAATTTTTCAAAG
TTTTCATTTAGGATTATTAGAGTCATCTTGTGAAAGTCCGATATTCCAGT
GGTAATAGTGTAAGCAGTTTTCTGAAAATGATTTGGCTTATTTGTGAGNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
AGCTCTCTATTAATCATTGGAGAATCTACATCATACCTGTGCATGTTGTC
TTCTTGCTGTTCTTGTCCGACTCGCTGTTCCTGTCCGTCTCGTTGTTCAT
GTTCGTCTTGTTGTTCATGTCCGTCTTGTTGTTCATGTCCGTCTTGTTGT
TCATGTCCGTCTTGTTGTTCATGTCCGTCTTGTTGGTGAATCAATGTGAT
GTCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATGTTTTGTGTTCGGGTA
ATGTATCGTCTATTTTTGTTGTTTCTTTATTTTTATCTAATTGTTTGTTT
GCAGCAACAGATATTACTGACGTTGGCTTTTTGAAAACTTCTTGATGTAG
TATCCGTTTTTTGAATCACCTCGGACTCTATGTACTACTGCAGATGAATC
GGAGTTGAGATTTTTTGCTTTTTCCCCTCCATTCTTTAAGGACAGACCTT
TCTGTTGGTGTTAGGTCTTCCGTTACGCTGATTCCTTTATATTCCTCGTT
ATCTTTCAGTGTGGATAGGTTGCGCAGAACTGTCATCTTTTCTTTTTGTG
TACCAAGCATAACTTTAATTGGTCGTTTTTTATCGGTGGCTTGAGTACCG
ATTCTTGAGATGGCTCTCATGTTTGGTTTTGGTATTTTGATCGTTTCAAT
TAGGGTATCAACATAGGCTCTGTCAGCGATTTCTGTTTGTTCAGGCGTGT
TTTCAGTTACTCCATGAATGATGATGTTTTTCGATCGGTTATCATGATCA
CGCTTCTCTTTCATTTCCTCATACCTAGCTTCTTTAACGATTGTTTTTAA
GCCATTCGGAGTGGAGGCTTTGGTAGCACTAGCATAGGTTTTGACTTCTG
TCACCTGATCCTCTACTTTCGTTAGTGATGACTCAAGATGGCAGATATTG
CTTGGTCCAGGGTTATATAAAGGTCAGTGGTGTAACCGGAGGGGGTTACA
CCAAAAAAAAACGCAAATAAAAACCGGGAGTTAAAAAAAGACCCAATAAA
GTCAGGGGTGTTGACGCTATGAGGTTTGGAATGCCCTGAAAAATAGCATT
TTCAGACTCAATTTGCAAATAATACCGAAAAGTTTTGCTTTTTGATTTTT
AATTTTATTATTTTTCTGTTTTTAGGGCTTGGTGGATGAAAATGAAATTT
TCATAGCTGTCAAAACATGCAAAAAGTTTCACGATGAGCGTGGTGAGTAA
CAAACAAAATATTCTTTTTGACACTTTTTGATGCGATATAAAACTTTTTT
TAAATTGTAAAAGGTCCCTAAGAAGTTTATAGTCCTCTTTGCCAACAAAA
AAAATTATTTTTGTCAATGTATTTTTAACAACTATCACGAGAAGGTTACA
GATAGGGCTCCTTTGAAGAAAATCTTTTTTTTACATCAAAAAATTTTTTT
TTGCTGTAAAAGATTCAAAATTTTACGGACCATCGAATGATGCATCTCCC
GTATCAAAATTGCAAAAAATGCTAAAAACATTATTGATGTATAATCCCTA
TTGATTGAGCCTTCAAATTGTAAAAGAAAACTGTAAAGGGAAGTTTAAAT
GGAATTCATTTTAAGAGATGAACACTCTCCATCGTATTGTATGGTTTAAA
ACAAACAAGAAGTGAAAATTTAGTTTTTAAGAAATTTTCGAGGTTGGATA
TTTCCTATTAGATCAGGTCTTGAGGTCGAAGAAGAGTGCTTCAACAAAAA
CTTAATCTATTTAGGATGTTTAAAAAATTTTTTTGCTTGTTATACTTTGA
AAATCTCTGAATTTATCATTTATCATTTTTGTTCTTGTAAAAAGAGTATG
CTTCTCTGTAATACTGATCCCTCCTTCTCTGTGTTTCTAAGTTTTTAAAG
CAACGCTTCTNGTAATACTGATCCCTCCTTCTCTGTGTTTCTAAGTTTTT
AAAGCGACGCTTCTTTCGATATCCCTATTATAAAGTCCTACAATGGAATA
ATGGTCTTTTTACTTTTCAATAAAAGAGGGGAATTTTTCGGTAAAGATAA
AAATGATTTTAAATTTTGAAATATCTCAGAATCACAATTTCTTCAAAAAT
CCAGTGTACATACCAACTTTGAAAGGTTACTATACAAGATCTGGTTGGTC
GATATTTCTGAAACCTACGTCATTCTATTCAGAAAAGGTTGAATAGCAAA
ACCGTGCCTCCGATTGTTGATTCGAGGTTTTGTTAGGGGGAAAACTCGCT
TTAAACGTGAAAAACCTGTTTTCTAACATCGCATAACATGAAAAGTTAAA
TATCTTTTGAATGGGGCGTGTAAATGATAAAGCGGAGCACTGTTTGGTAG
GGGAGAACAAGGGCTTTCGAATACAAAAGGTTTCATTGAAAAATATTCAG
TAGATTTTGAAGAGTAACTCGTCAAAGTTCAAAGTTCGTCTTTTGAAATC
GCGTCATAATTCCAAATTAGAAAAATATGTCGAAAAAGTATTATTACATA
TTTAGAAAGCCATTGAATTGAAGTTTAACCACTCCAGTCCAATTTCATCA
AAGAAAGGATGCTAAACAATTAATGATACTTTTTAAAAATAATCAAATTG
ACCTATCTGTAACCTTCACGCACATCGCCAATTGATGGTTGATTTGATTT
TGTAAAATTTTACAGATTTGTTATACCAAACTGCATGATAAATACTCTGA
AATTTAATATAGAGCTGAATATTCGTAAAATTCTCATTTTTCTGATGTTG
GATGGTAATATTGATGTAGCAAATAACGCAAAAACTTTATTGTTTTTCGG
GCGGATTGTCACAGAATCTAATTTTATGAATTTTGCTGACAACTAATAAA
GTCTGTCTCAATATAATCTGCAGTGGAGACAAAAAATGCTGTAACGTTTG
ATAGAATTCGAATGAAATGGTGGTTTGCGCAGGTTGAAAGATAATAAGGA
GTGGGATATTATAGAATGACAAATATAATACTTAAAAATCAAAAAATAAA
GATGAAAAATAAAGAAAAAAGTTGAGTTTGCGATCCTTGTTGTGACGATC
GAAAACTGTATTAATAGTTCTTTCTAACTTTCAGTCCCTGTAGTAAAGAA
GACAGTAGGCAAACATGCCAAACACATTCGGTATTACAGTGATGTTGCCG
ATGAAAGTATTCCTACTGAATATATCGATGTGGGAAACACTGAAAGAGGT
ACCTTTCTTTACTGATCAATTTTCATCTTAGTTTTGACAAGAACTCATTT
TGACGAGTTATCTTTTTTAAATTTTGTTTTCTTTTATCATAAGATAAAAG
GAAGGTGGTCTTTTTGGAACAATATAAAATGATTTGATTTTGATGAGTGA
GCCTAGTATAAAGTCCATCTGACAGCGTTACAAAAACCTCTGATTGGAAT
CAGTTAAAAATTACTTTTCGAATTAGCCACTGAACAGCTCTGACAGGATC
CAAAAGCTAAGTCAATTAGTCTGAAAACACTTATGACCTGCACTTCCTAT
ATGTGAAGATCATCCTTGGTCAATTAAGCTAACTCAGATGTTTAATTTCT
AACATATAGGTCATTGTCAGAAGTTACACAACATTATAAAACGTTCAACA
GATGAAGAATGGAGAGATAAAGAATGGCTTGTTGTCATTGACGACGACAC
CATTATGAGGTAAACCCAGAGTGAACAAACGCTACTTTCGTCAGATATAT
TTTCGCGAGATTTAATTTCATCGAAAGTGGCCCTGTAAACGCAAAAGATA
GCATATTTACAGTGGTAGTTTATGCTGAAAATCTGATTTTGAAAATTTGG
CGTAGATTTAATTTCGTGCGTCAGCGATCTCACGCGATTTCGCGAAATTT
ATTTTCGCGAAAATGACAAAAATTCGCAAAAACAAGAAATTTAAATCTGT
TGCGCAAGTTTATCCGATTCATCCAAGAATCTAGCATTTGGACCTACCAC
TAGGACTTATTTTGTTTAAGATTTCAAAGACAGGGAATGGGTCATGAAAT
CCCAAGAAAATTGACAATCTGAAAATTGATTACTCGATAACAGAAACATT
ATCTTTTTTATGAGCTTTTCTTATTTGAAAAAATCTACATGAGCTGTTTC
GGTGAAATGCAAACGATCGTTCTCACTTCGAGAATCTCTTCATTCACTTC
TCATCTGATGACAGGTTAAATACATTGGCAAGTTTGTTGACAATATCAAT
TGATTCACAACTCAGACTGTTTCGCTTATTGAAAACCTTAAGAAAGGCTT
TTTGTTTGATGTTATTAAAATGTGTATGTAAATTCATAACGTGTTGTTTA
GCTTGCGAATCCCGTACTTGGATGACCTTGAAATATCGATTGAAAGATGA
AAAAGCTTTTTCGTATTCGGTTAGTTCTTGTTGTAAGTTCGTTATACTCG
ATTCGAGTTTTTTGATCTTCTTTTGGTTGTCCTTAATCTTTTGATCAGCC
TTCAAACTGAGTTTTGAGAGAAACTTAATTCTCAACATCTGCGTTTTAAC
TGTACTGTTTTGTTTACAAATAATATCATCCTTGTATCTAGCCTCCTGAT
TTGCTAATTCTAACAAAGGGTTGTTATCATGGTTTTTCTCCGACAGGAAA
CTTTGTAATTGTTCGTTTTGTGATTCATAAAGTTTGCATAGCTTTTCACT
GTCATTCAATTTAGCGTTTTTCATTTCAAGCTTCATTGCCATTAGATGAC
GGGACACTTTCACCTCAGATAGTTCTTTAGTTAATCTCTGTATCTCTTTG
TCCTTGGTTATGGTATTTGACTGGTGAAGTTCGTCTGATTTTTTCCTTTG
AATCAAAAGTTCATCAGTTTGTTTCTTTAAAGATTGAATTTCGGCATCTT
TTGAATCGCTTTCTTTCCTCAACTGATTGTTGACCTAAGATAAAGATATT
TATAATTAGAACTAATTTGATGAAAACAATTAGCCCTAGTTTAGACGGCC
CACTTTTCGCCCTGCCTATTCTAATTGTGAATTGAAATTGGCATAAAGTG
GGATGTCTAAAATCAATGCATTGCCCTCTTTTGACTTCAGTGCAATGATT
TCTCTCAATCTTTTTCAAGCAACTTTTAGCCCACTTTCTGCCTACTCTAA
CAATTAGAATAAGCAGGGCAGAAAGTCGGCCGCCTAAACTAGAGCTTAGA
TACTGTCTGAAAATCTAAATGATAATGTTTTTGAATTGTAATTTTAACCT
TTACCACGCCGAGGCCGTAAATTTACGTTCTAATANGTAATGTTTTTGAA
TTGTAATTTTAAGTATCCTTACGTACCTGCTCCGAATTCGTGTACATTAA
ACGAAATTCACTTTCAACTTCACCCATGACTCAAGCATAAAATCCACTCA
ACATAAGTTTTTATTTTATGATTTGATCAATTTTCTATAAGAACTTTTCT
TTTCGCTGCATTTTTCTTCCAAACTTTCAAAATTGAAATTTGACGTCAAT
TCTGACACGTCACTCGAACAAAATATCTGACATGGACGATTCGTTGAAAA
CACTTTTCCTTTTCAAAAAAAATTTTTCTCCTTATCATAATTCATTGACA
CGCCTCCTTTCTATGTTTCATTTCTTCTTAAAAGGATAAACATTACATGG
AGTTTAGTGTCCTTATTTTTTAGGGACATTCTATTCTATCTTCTCTGCAT
GTTTGCTATTAAGACTCAACTTCTTGAATCATTATTATGGTTTCATATTG
CGAATTTTCGTAAAATCAGGGATTCTTCCCTGTCTTTGCGAGGCTCTTTA
TTAACAGATATTCGTATAGACCTGTGTAAACACAGTCAAATCAGCGAAGA
ACGTCTTAAAAAGATTAAATATTTGGATGGGGTATAGGCAAGAAACAACA
AAAATTTGTTTATTGATAAATTTTCCTAACTCTCAAAAAATCTGTTGTTT
CTTGCCTGTGACCCATCCAAATATTTAAGCTTTAATAGTGGGAAGGCAGA
GTTTCATAATCTTAAAAAAATTCCTCCTTCATGATTCTAAACATGAGAGA
TACTGAGATAATTTGAATTGCATTTATGCATTATACTCCGCAAGGTTCAA
GTTTTATAAAGAAAATTTCCTCATATATTTTCTTCAGTAAGGCTCGAACG
AATCAACGAATCTTCCTTTCTTTCAGTTACGATCGGTTACGACGACATTT
GGCGTGTTACGAATCCAAGAAGCCAGTTTTGCTAGGTGAAAGATATGCTT
ACGCGTTGAATTTTCGAAAAGCTGGGTACGAGTACCCGACAGGTGGCGGA
GGGTATGTGGAAATCTCTTTTTATGACTTGCTCTGATATGGCTGTTTCTT
TCTACCATCAAAGAAGAATTTTCGGTGCTTTTTAGTGGAAGCTTTTAACG
CCCAAGTTGTACTCTTAGGTGCCAAATAAACGGGGGGGGGTTCGATTAAA
CGGATGGTTGGAAAATTTTCGGAATTTTAATAAACGGGGCGGACCTAATT
GCCGGGGGGTTGGAGATTGTACTTCTGAAAACCCAAAAATAAGGTAAATA
TAGGCTAAAATCAGGCTTTTTTGAGCAAAATAAGGCGACTTCTTCTTGCT
AACTGAAAATATTCTTAAAAATTAATAAATGGGGGGTCCTAATAAGGTCC
AGGGGGATGGAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCGGGGGGGGGCGTTTATTTGGCACCTAAGAGT
ATTTGCCTTGTAGTACAATACCTTAAGATGTGATTGACAGATTCACCGAT
ACTTGATATAACCCTTAGTAAAGACCTCAGATTTGGGTGAAATTTTGTAC
ACTCTTACGTAAATCTTGTCTTAGAACATTTTGGGTCTCTAAATGACGAT
TATGCCTCAACATGGAACAGTGCAAACATTAACAAATAATACGAGGAGTT
ATGCAAATAATTCTCAAATGACAAAGAACTAAACCTTTATTTTTACCAAT
GGTTCTTATACAGTGAGTGCTAACTGTTTAATCTACCCAAAATTTATTAT
CTCCTTTATAATGTTTGTTTCCCTTATAATGACTATATCTCCTCAATAGT
ATGATAATGAATCGTGCCGCTATCAATGAACTTATAAAGAGTGGATGCAA
ATGTTACAAAGCCGATGAACCTGATGATATGTGGCTTGGCAATTGTTTCA
ACAGAATGCAAATACCTATGGTACATTCAAATTCTCTTCACCAGGTTGGA
TTCTTGAGCATTCTTACTTTTCAGCATTTTTGGTTCATCTGCAAAAGTCA
GATCTGCCTCAAGGAGAGTTTCATTAAAAACACTAGGAAAGCATGTTAAG
AGTTTTAAGCAAATTACTTTAAGCATACACTGAATTTCAATCTACACGAT
ATTGTTGAAGTTTTTATTTGCATAGCATCAGTGACAATGATCCGGCAATA
TTAGAATTCTTTAATGTGTTTTTTTGTTGAAATTACAGTACCATTACGGC
CTCACATATTTCGGTAGTAGGGTAGGGTAGTATTCAGCATATCTGAGGCT
AGAAAAAAGTTAAGCATAACGTAGACCAGAGTTTTCTTCTGACTTAAACT
TTGCTTTCTGATGATTCCAGTGCTAAGCTTAACGAGGTTTGTAAAAAAAT
CAATTTCTTTAGAAACTTGTAAACAAATACAATCAACTCTCTCTAATTCG
AACCTCTATTATTCGAATCTTTCTATAATTCGAACTAAAATATTGGACTC
CTCAGTTGGAAATTAGTATAAAATACTTTCTGTAATTCGAAGAAAATTCT
TGGTCCCTTGAAGATCGATTTAGAGAGAGCTAACTGTATCCATTTTTCTC
TCTAGGCTCGTCCATCTCAATACACTAAAGAATTTCTCTCACATCGCTTC
CTGGTCTCTTTCCATAAACATCATATGGTTGATCCAATGCAAGTCTACCA
AGATTATCTACAAGCCGGGGGTGAAGATCCAAATGTCCAGTCCGAGAAAG
AAGAATTGTAGTTAGAAGAAACTAATTTTTTTTATATAGAATTTAATTAA
GTCTGATTGATGGTGACTTAAATTTCAATATTTTCTAGTTTCGAAGCTGT
AATATTCTCGATATGCTTATTGAGGCTTGGGTAAGTCTGACGTTTAGCTT
AGGTTCCAACGGAATAAATGCTTTCGTTCTCATTATTCTTCTATAAAAAG
CACACACATACATTTTATAAATGGAATATCAAGTTTGTCGCCAATACGTC
TTGGGGTCAACCTGAATGAAATAAAGGGAATTGGGCTGTAAAGTCTACCA
AGGTTAAATGATGTAATGTCTGACGGTATTTCTGTCATATTTTCAAAGAT
TCAGGGCATTAACGTTTTTTTTTACTTTTTAAAACACGAACCCAACTTCT
TTCGGCATTTGATAAGAAGGTTTGTGGAAACTGAAACTGCTTGTAAGACT
TGCTCATTGCTGCTTGTTCATCGAGATCCAGACATAAGAATAGGAATTGT
TCCCTTGATCTTTCGAAATACCGAGTTTATGTATGTGTGTTTTTCTGCGA
CGGAGACGATAAGGTTCTAATTTGACTAGATCCTGAACAACTGAGGACAA
CGGTAAATCAGCAATTTTACCGTCCTCGATATTGCGGGTCAAAACTGTGG
GTTATTGCAAAACGCTTCAGTCATTCTACCGTCATCAATAGTGCAAATAC
ATAAACCCGCTAGCTAATGAAGCTCATCCACTACCACCTGGAGACTTTAG
ATTTGGTTTACCACAGTGTGATGGTTCTTTGTAGGGTTGTGGTGGGGATT
AGCCGTACTCAGGGCTTGAATTTTAACTAAAGGGATTTGGCTTAGATTTT
ACCTAGGTTTTCCTTAATGAGTTTTAGGTTTCAGGTGTTTGCAGTATATC
GAAATTTAAGTATATTGGTATCCAGATAGGCTTAACAAAAAAGATTGATA
ATATTGATTAATATAGGTAATTAATATAGGTATAGACATAATATAAATCC
TCTAGCATTTTTAGATTCACATAATATTATAATGCACATACACATATTAT
ATATAAGAAACTTTATATCTAAACACGTTTAATTTTATTAGTCTTTTAAT
AATTGCTGATATCTCAACTGGTTATAAATAAAACGTCAACAGAGGTTTTT
AAGTTTTTGTTTTTAAATAAGAGTGGTATCGTTTGCTTACTCATCAATTT
TAATTCATAAGCTTTTTCACATTGAATTGACACGGGTGGGGAGCAAGATT
GGTCAGAAAGGGGAAAAGAAAGGATCTTTTTTTGCTTATATCAGCTTAGT
ACAGACACTGTCCTGATATGAAATATGTGTCTGATATGAAACACGGGAAC
ACTAAAATAAAAAATAAAACCTTCAACGACGTTCCAGTTAGGTCTCGGAC
ATCATTTTATATCCCACAAAGTAATTTATTTATAGAAACATTTTAGAAGA
CAAACAATTATTTATTTATGACTTTGAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_011548XLOC_011548Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00020574-exon-sc0000358-1575043694:253955..254007TCONS_00020574-exon-sc0000358-1575043694:253955..254007Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1575043694:253571..253696TCONS_00020574-exon-sc0000358-1575043694:253571..253696Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1575043694:248566..248632TCONS_00020574-exon-sc0000358-1575043694:248566..248632Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1575043694:246610..246723TCONS_00020574-exon-sc0000358-1575043694:246610..246723Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1575043694:246149..246248TCONS_00020574-exon-sc0000358-1575043694:246149..246248Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1575043694:243556..243681TCONS_00020574-exon-sc0000358-1575043694:243556..243681Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1575043694:242564..242708TCONS_00020574-exon-sc0000358-1575043694:242564..242708Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1575043694:240328..241952TCONS_00020574-exon-sc0000358-1575043694:240328..241952Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1510915933:253955..254007TCONS_00020574-exon-sc0000358-1510915933:253955..254007Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1510915933:253571..253696TCONS_00020574-exon-sc0000358-1510915933:253571..253696Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1510915933:248566..248632TCONS_00020574-exon-sc0000358-1510915933:248566..248632Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1510915933:246610..246723TCONS_00020574-exon-sc0000358-1510915933:246610..246723Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1510915933:246149..246248TCONS_00020574-exon-sc0000358-1510915933:246149..246248Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1510915933:243556..243681TCONS_00020574-exon-sc0000358-1510915933:243556..243681Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1510915933:242564..242708TCONS_00020574-exon-sc0000358-1510915933:242564..242708Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1510915933:240328..241952TCONS_00020574-exon-sc0000358-1510915933:240328..241952Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1491911889:253955..254007TCONS_00020574-exon-sc0000358-1491911889:253955..254007Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1491911889:253571..253696TCONS_00020574-exon-sc0000358-1491911889:253571..253696Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1491911889:248566..248632TCONS_00020574-exon-sc0000358-1491911889:248566..248632Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1491911889:246610..246723TCONS_00020574-exon-sc0000358-1491911889:246610..246723Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1491911889:246149..246248TCONS_00020574-exon-sc0000358-1491911889:246149..246248Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1491911889:243556..243681TCONS_00020574-exon-sc0000358-1491911889:243556..243681Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1491911889:242564..242708TCONS_00020574-exon-sc0000358-1491911889:242564..242708Clytia hemisphaericaexon
TCONS_00020574-exon-sc0000358-1491911889:240328..241952TCONS_00020574-exon-sc0000358-1491911889:240328..241952Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000358supercontigsc0000358:240328..254007 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.39735	0	0	0	0	0	0.0643823	0	0	0
Blast
[Close]
BLAST of TCONS_00020574 vs. Swiss-Prot (Human)
Match: B3GLT (Beta-1,3-glucosyltransferase OS=Homo sapiens GN=B3GLCT PE=1 SV=2)

HSP 1 Score: 256.144 bits (653), Expect = 2.244e-75
Identity = 134/293 (45.73%), Postives = 185/293 (63.14%), Query Frame = 3 
Query:    3 LESNPPDYGFSIDVKHEVAKFIYNDGKGTRLTNVPQFCINSALKKDHCVSTVAKEIPDC-GLVDENEIFIAVKTCKKFHDERVPVVKKTVGKHAKHIRYYSDVADESIPTEYIDVGNTERGHCQKLHNIIKRSTDEEWRDKEWLVVIDDDTIMSYDRLRRHLACYESKKPVLLGERYAYALNFRKAGYEYPTGGGGMIMNRAAINELIKSGCKCYKADEPDDMWLGNCFNRMQIPMVHSNSLHQARPSQYTKEFLSHRFLVSFHKHHMVDPMQVYQDYLQAGGEDPNVQSEKE 878
            L+S      F+ID+KHE+A +I++ G G  LT VP+FC N      +C +T    +P C   V + +IF+AVKTCKKFH +R+P+VK+T    A  I YYSD  + SIPT  + + NT+RGHC K   I++R  +       WLV++DDDT++S  RL+  L+CY+S +PV LGERY Y L     GY Y TGGGGM+ +R A+  L+ S C+CY  D PDDM LG CF+ + IP+ HS   HQARP  Y K++LSH+  +SFHKH  +DP++VY  +L    ED   Q  ++
Sbjct:  204 LKSESLKSDFTIDLKHEIALYIWDKGGGPPLTPVPEFCTNDV--DFYCATTFHSFLPLCRKPVKKKDIFVAVKTCKKFHGDRIPIVKQTWESQASLIEYYSDYTENSIPTVDLGIPNTDRGHCGKTFAILERFLNRSQDKTAWLVIVDDDTLISISRLQHLLSCYDSGEPVFLGERYGYGLG--TGGYSYITGGGGMVFSREAVRRLLASKCRCYSNDAPDDMVLGMCFSGLGIPVTHSPLFHQARPVDYPKDYLSHQVPISFHKHWNIDPVKVYFTWLAPSDEDKARQETQK 492
The following BLAST results are available for this feature:
BLAST of TCONS_00020574 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
B3GLT2.244e-7545.73Beta-1,3-glucosyltransferase OS=Homo sapiens GN=B3... [more]
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