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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00020600 ID=TCONS_00020600|Name=TCONS_00020600|organism=Clytia hemisphaerica|type=transcript|length=299bp
CTTTGTTGAGTAATATGACAGGCTAGTGTGTTGAACTTTGGTTTTTAAGA
TGCAAGGCTAGTGGCTTTGACCCATTACTCTTATGGTATATTATATGATG
TGTTTTGGATTTGGATAACTGTTTAATTTCGTTGTGATTTCCACGACTTT
TTTAAGAGTTAAATTCCACTTTAACTAAGTTGTCGTATGAAGCAAGTCTG
TCGGACAGTCAGACGCAACGTAACTTGCAAGACCGGCTGCAGATGCTAAG
TCCCAATCGCTTCAAgaagttgaagaagaaaaatagatTAACACAGGTA Run BLAST on NCBI transcript from alignment at sc0000359:127624..128874+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00020600 ID=TCONS_00020600|Name=TCONS_00020600|organism=Clytia hemisphaerica|type=transcript|length=1251bp|location=Sequence derived from alignment at sc0000359:127624..128874+ (Clytia hemisphaerica)
CTTTGTTGAGTAATATGACAGGCTAGTGTGTTGAACTTTGGTTTTTAAGA
TGCAAGGCTAGTGGCTTTGACCCATTACTCTTATGGTATATTATATGATG
TGTTTTGGATTTGGATAACTGTTTAATTTCGTTGTGATTTCCACGACTTT
TTTAAGAGTTAAATTCCACTTTAACTAAGTTGTCGTATGAAGCAAGGTAC
AAATTGTACGATACAAGTGTCTCTTTGTGTTAGACTTCTTTCTACTATCT
AGATATGGATAATTTTTCTTTGCGTATTGTGCTATTGGTTAAGATAACTC
AATAGTCGAGAAAATTATCCCATTCCGAGAAATCTTCTAAAGACTGACCC
TCCCACCATAATCTGTTACTTCATATTTTATTAATCAAATCATTTCATTC
ATAAAGCGTTAATTTCCTTTGGCTAggttttccattttttataaCAAATA
GACATGACAGACAAAtcatttaaattgaaaataaattgtcTCGCGATGCA
CTTTCTTTCGTTATTACATGATTTGCATGATCTCATTAAAAATTTTCTCT
CTAATCAAAGATAACATCAAAACACGCTATACATTTTATATACAGTGGAA
ATTCTTTAACCCGAACCCAcggcgttctaaatctagacGCAGtgctcgaa
cctctataactcgaatgtctccataactcgaacaaattttactgtccatt
cagttaacaatgttaacaaaatcttacttcataactcgaaatttccttaa
ctcgaacaaatttgtttcCCTTGCTTGATCGAGGTATGGAGACACTACTC
AAAGGAGAtatcgagttatggagtaaggtttataaggcattgggcttttc
cagaaatagtccgtttcttttcaagtaaaaaatacgatatccaggggtaa
acctttataagagaggatatccagggggttgagcatatttttaagagtgg
atatccaggtgGTCTTTACTAGTAacgttcgatacttcgaaaaatcaata
tcctcaatttcctttttctggaaaagcccattgttaTCTAAAGGAACGAG
AAAATATGTTAGAGTTAAAGatacattcgagttaaagacgTCAGAGataa
agagactccactatGTTGAATTTAACTCCACTTTCTTTACTTCTCCAGTC
TGTCGGACAGTCAGACGCAACGTAACTTGCAAGACCGGCTGCAGATGCTA
AGTCCCAATCGCTTCAAgaagttgaagaagaaaaatagatTAACACAGGT
A
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00020600-exon-sc0000359-1491911889:127624..127819 | TCONS_00020600-exon-sc0000359-1491911889:127624..127819 | Clytia hemisphaerica | exon |
| TCONS_00020600-exon-sc0000359-1510915933:127624..127819 | TCONS_00020600-exon-sc0000359-1510915933:127624..127819 | Clytia hemisphaerica | exon |
| TCONS_00020600-exon-sc0000359-1575043694:127624..127819 | TCONS_00020600-exon-sc0000359-1575043694:127624..127819 | Clytia hemisphaerica | exon |
| TCONS_00020600-exon-sc0000359-1491911889:128772..128874 | TCONS_00020600-exon-sc0000359-1491911889:128772..128874 | Clytia hemisphaerica | exon |
| TCONS_00020600-exon-sc0000359-1510915933:128772..128874 | TCONS_00020600-exon-sc0000359-1510915933:128772..128874 | Clytia hemisphaerica | exon |
| TCONS_00020600-exon-sc0000359-1575043694:128772..128874 | TCONS_00020600-exon-sc0000359-1575043694:128772..128874 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000359 | supercontig | sc0000359:127624..128874 + |
Blast
The following BLAST results are available for this feature:
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