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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021350 ID=TCONS_00021350|Name=TCONS_00021350|organism=Clytia hemisphaerica|type=transcript|length=2465bp AAACAACCATGTATATTGTTTTTCCAATTTAAAGCGAAGGGACGAAGTCG CGATCCGCCTCGAttcagccaatcaaatcactaGAATTCATCGCATGAGT GAAGAACTTCACATTCGTTTTCGATTTGGTTCGTTGTCCGTGATGGAGtg gggaatttttcaaaatggcgacggAATTCAATTCTCCGAGCACCCCAAGC GCAAGCCGTCATGAAAAATCTCTTGGTTTGTTAACAACGAAATTCGTAAC TCTTCTACAGGAAGCTAAGGATGGAGTACTTGATTTAAAAGTGgCAGCTG ATCAATTGGCTGtgcgtcaaaaaagaagaatttatgATATAACAAATGTA CTGGAAGGTATTGGTTTGATAGAAAAGAAGTCCAAGAATAGCATACAGTG GAAGGGTGCAGGACCAGGCTGCAATTCAAGCGAAGTGTCAGCAAAATTAA GAGACTTAAAAACTGAATTAGACAGGCTTGATAGTATTGAACGTATACTT GATGAACAAAAACTATGGGTCCagcaaagtttaaaaaatgtatCTGAAGA CCCAGATAATGAACGACATGCATATGTATCACATGATGATATTTGTAACT GTTACCAAGGTGAAACATTGCTAGCTATCCAAGCACCCTCAGGCACTCAA CTTGAAGTACCACCACCTGAAATTCAACAAGGTCAACGTCCCAAGTATCA AATGCACCTGAACAGTTCGAATGGCTCCATATGTGTACTACTTGTAAACC ATGATACCAAATCTGATACACCCGTTGTTGTCCCCGTTCCACCCCCGGAC CAAGACGATTCGACTTCAAGAACAACATTACCTAGTTCGTCTTCCACAGC AACGGATACAAAGAAAAACGTCAAATCAAGTACAGTCATCAAAGAAGAGA CGATAGAGGAGCGCCTACAAAaCCCAATGGCATCAGGTGGTCAAGATCCT TCTCTCGTTGAATCTGAACAAATCACTGAACTTGAAGATATCAATCTGGA CAATTTTTGCAAAGATACCGACGCTTTTACGCCACTTTTAAGACTTTCAC CACCTCCGGGAGACCAAGACTATTATTTTAATCTGGACGATAGTGAGGGC GTTTGTGACTTATTTGATGTCCCATTGAAAGTATAATTATTGTTGGCTTT CGCTATGGTGGATTCTGGTTGATCGATGCCGCAGGCCATTCTGTGTGCAT TTTTTAAGTGGCAGGGGAGATGTTATTTgtgaaagatgtagatttatACA TAATGTGGTTCTTGGATGCTTGGATAAACTGTTCATTGAATAGTTTTATG GTCTTGATTGTTAAATCGATGATTATGTGTCCATTGAATGTGTAAATTGT ACCAAATTTATATATTGGGCGCCTTCTGGTGACAAAATGAATGTAATCCT TTGGTGAATAACATCGTGATGGTGCtatattgttcttattttatCAAGAA TGGCCATTCCAAGCCATATTGCTTTATTTCATCAAGAATTGCCGTTTCAA GCCATTTTGCCTTGGTACCTGAATGGATACCTCACGCCAACGTTTTAAAC TAGCATACAGTACgtaatttgaatgaaaacaacaataacaacaacagCAT CTAATCTTGTTTTCATCTCAAGGTAGGGAAAAATATGTTAACCCTCCTGG TTAAATTGATATCGTTTGAACAATAACTTGCGGAAGGTTTGCAACTTTTG TCCTGTCAGTTTGAAGtttcaattttagatttttattcgATTTTTGACTT ACTTTTGAACAGAGAGATTTGTTACCATTTATTAGAATATTAGCTCAGAT TATTTACATTATATAattgttttttagaaaattttcgaagccctTTTCTT TCGAACATAATAAGTGGTTTTATATTAattctttatttatttacatACAG ATTTAtgatttgtttgttgtttttgtgtATATCCTTTGCGTGGTTGTGCT TTTACTGAATCTTTCTCTTTTAAACGCTTTGCGATGTTATCAATGTTGTG ATTTTATTtatgaagtttaaaaaaatttatgcgACCTCGTACCATTGAGG acttgattaatttttttacttgatgatattccactcacaaatatcttttc aacgagcaaaAAATCGCAATGTCATTCCAAATTCTATCAAGAGCTACACC CATTTTtggtctcagctgcaaattattttgagattggCCATATTCAACAC TCGAGCACTTTGATATGATACATATGTTCACAACAGCATGGTTTAGGGCA TAATATGTTAATAGCTCAATTCTTATAACAGATTATAAATATTATATAGA ATATTGTATGctatattttgatttgatgttttgaaaGCATAACCTAGTAG TAGAAAAAACACctagatagaatgatagaaacaCAGAAAAAACGTTCGAC AACGATTCTATGCTTTCCTTCGAAGTAAAGGAACGTTTTTCAACTGAAAT TTCACTAACGTAATA Run BLAST on NCBI protein sequence of TCONS_00021350-protein >TCONS_00021350-protein ID=TCONS_00021350-protein|Name=TCONS_00021350-protein|organism=Clytia hemisphaerica|type=polypeptide|length=323bp
MATEFNSPSTPSASRHEKSLGLLTTKFVTLLQEAKDGVLDLKVAADQLAV RQKRRIYDITNVLEGIGLIEKKSKNSIQWKGAGPGCNSSEVSAKLRDLKT ELDRLDSIERILDEQKLWVQQSLKNVSEDPDNERHAYVSHDDICNCYQGE TLLAIQAPSGTQLEVPPPEIQQGQRPKYQMHLNSSNGSICVLLVNHDTKS DTPVVVPVPPPDQDDSTSRTTLPSSSSTATDTKKNVKSSTVIKEETIEER LQNPMASGGQDPSLVESEQITELEDINLDNFCKDTDAFTPLLRLSPPPGD QDYYFNLDDSEGVCDLFDVPLKV Run BLAST on NCBI transcript from alignment at sc0000385:7150..15831- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021350 ID=TCONS_00021350|Name=TCONS_00021350|organism=Clytia hemisphaerica|type=transcript|length=8682bp|location=Sequence derived from alignment at sc0000385:7150..15831- (Clytia hemisphaerica) AAACAACCATGTATATTGTTTTTCCAATTTAAAGCGAAGGGACGAAGTCG
CGATCCGCCTCGATTCAGCCAATCAAATCACTAGAATTCATCGCATGAGT
GAAGAACTTCACATTCGTTTTCGATTTGGTTCGTTGTCCGTGATGGAGTG
GGGAATTTTTCAAAATGGCGACGGAATTCAATTCTCCGAGCACCCCAAGC
GCAAGCCGTCATGAAAAATCTCTTGGTTTGTTAACAACGAAATTCGTAAC
TCTTCTACAGGAAGCTAAGGATGGAGTACTTGATTTAAAAGTGGTAAGAT
ATTTTTTTAAGAATATATGATTTGATATTGTTTTAGCAAAAAAAAAAGAT
TTCACAGTTTAAAAGTCACCCTTGGCAGCAACCAACCAAGGTGTTCTGGT
TTGCTGCCTGGTCTTCCTTAAAGTGATTTACATTCTGAAATCAGAATACC
TCTTGCTGGCGCTCAGTTGCTTTGCTAAAACATGGTTTGGGCCATTCCAG
AAAATTTTCGTACTGTAGAAGAGGTAGGGTGGTCAGAGGAAATTTCAAAC
TTACTTGCAGAATACCAAACCAAGATTAATGGAAAGCCATAACCATCAGA
AGAAAAATGAGGGGTCATTTACCTTCCAATTCTTTAAAGTTCCAAAGATA
TTACATTTTGAAGTTCAATTTTTCAAGCATTTTCGTGCACGCATCGCCAG
CCATTTTGTACCTTCACGGCACCAAAAGCGAAAGTGTTTTATGAAAAATT
CCGCGCTGGAGGTTTGGTGCGAGTTTTATTTTCCGTAGATCAGTGAGGCT
AGGCTGGAACTTCAATTTTTGAGGATTACGATTTTACCAGTTTTTTAGCG
ATTTTTGCCTCGCTAACCCAAATCTCGCAACCTCTTTACCTTAAGCCAGN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGGATCGATTCTCAACAACAAAAT
ACATCTTTTGGTCTTTGGGTTTGTTTCTGACGTTTTTTCTTCAAAGAATA
TCGATCACTTTCCTTTTCCCCTTGAGTGTGCGAGAAAAAAATGACAAGCT
CGTGTTCGTGCGGGCGAATAAAGATGAGGCGGCAATCTTGCACTGAGGGT
GCTACTTAGTTTCCGCCCTATTTTGCGCCCACGATAGAATGGTTCAACGA
CTCTCTTTAAAGGCCCAGTACGCTAAAGCTCTGGGCCAAAAATTGGGGAA
ATATTTTTTCAGAAATTGGAAAATCAGGGAGACATTTTGCCAAAATTTGG
GAAATCGGAGAAAGTTTTTTCAAAAATCAAAAATGCGCGAGATTGCGTGA
TTGCTCTGATAATGCAGGCCTCTCCACGAATAAAATCAAACGTGATCGAT
GAATTGATCTTGTAAATAAATTGATGCGCGCAAATTTTTTTACCAAATTG
CTCGTATCAATCAAATTTTATGCGCGCGATTTCTAAAAAATGCTCCCCAG
AAATATTTTTGATTTAATCATATAGATTCTTCCCTTATCTCTATCATAAT
GAGCTTCTCATATTACAGGATGCTAAAGTGTTTTATTGGACCTACCTCCG
GGTACCCCGGTGGAGGTTCTATAAATTAACCCATGTCCGTTTGTTCGTTC
GTCCGTCCGTCTGTTACCAGCTTTTCTCAGGATTGGCTCATTAGTTTTTT
CTGATTTTTTGCACAATTCAATGATGCAAAATGGCAATGCCCAGAACGTG
ACGGAGCCCGATTTTTGAGAAAAAATTTATTTGGGCAAATTTGGGCCAAA
AACTACCTAAAAATAGGGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NTCGCCTTAAAAAACGGATTTTCGTATTTTGGGGAAATTCCCTTTAACCA
AATAAGAAAATATAGCTTTTCTCAAAGTTGACTCATTATTTTTTTCAGAT
TTTTGCACAATGATGCAAAATGGCAATGCCTAAAATGTGACGGAGCCCGA
TTTTTGAAAAAAAATATATTTGGGTAAATTTGGGCAAATTTGGGCAAAAA
ACTGCCTAAAAATAGGGTTTTTTGGACTTTGTGTAAAATCCTGTCATTAC
TTTTTTCTGATTTTTTTACAAAGATGGAGGGCAAGATTCTCTAAAGAATG
GCTGAAGTGGATTTTCCTGGAAAATTCTTATTCGCCTTAAAAGACGGATT
TTCGTATTTTGGGAAATTCACTGCTTTAACCAAATAAGAAAATATAGCTT
TTCACAATGTTGACTTATAGTTTTTTTCTGATTTTTTGCACAATGATGCA
AAATGGCAATTCCCAAAATGTGACGGAGCCAGACTTTTTAGGAAAATTGT
TTTGGGCAAATTTGGGCCAAAAACAGCTTTAAAAGGTTTTTTGGGCCTGA
ATGGTTTAAGTGATTTTCGTATTTGGGGAAATTCCTTTTTACCATTTTAC
ATTATTCAACACACAAGCTTTATTTTTCCATNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTTTTC
CATTCTGAATTTTTGTACAATTATTGTCACTTTTTTCTTATTTTCATCTG
ATGTTAATCATTAGGTAGGTCCATTCAGCATGTTGCTTGTTTTTCTATTC
AAACTTTTGTTAATTAAATAGTTTTAAAGAAGTCTATAATTCCCATTTTC
AATTGAGCTTATAAGCTGCAAGGTCACCCTTAAACAAAGATAACTTTATT
ATGATGGAAACCTAAAGTAATTGGCGCGAGCGACTTTTCGCCCTACTGAT
TATGTTCAATCGATTCAATTGCATTCGCTCGCATTAATCACTCCTGTCTC
CTGTGGTGCTTACGCTCTCACTTTTATCTGATTTTCTAATGGCGTATTGG
CGGTTGCCCATTTGCTAAAGCTCTAAAGGAGTGGGCTAATCTACACTCAA
TCAATCTTATCAAACATTAACGTAATCGAACTAATCAAACATAATCGAAT
CTCAATTGAATGTAATTTTAATACAATCGAATATAACCTAGGAATCGGCT
GTTCAATTGAGATTTGATCATTGATTTGTAAAATCTTTGATAGCCAACCT
GTCTGGTTGGTATTTTACAGATCAGAATTTAAACTTTATATACTAAAATC
TTGTATTGACTGATTCGCTTGTTCAATTTGACTGAAATTTGTTCCTGAAG
GTTGATATATATATGTCAAATGAAAGAGACTAGTCACAGAAAAAAGATGA
CTTAAAATTTTCACCAGTGATTGCTATTGATCATCTGTGACAGTATGCAA
ATTATAATTTAGTTATATAAGTGGTTGGTATTTTACAGAGCGTCAAATGC
TCACTTTCAGCATAACCACTGGTCTGTGATGCACAAACGGTTAAGCTCTT
TAGGTAATTAAACGGTTGGTAAACCACAACTTTAAAAAGTACAGGTTCAT
GAGATTTTAGAACTTACGAGTACATGACCCATGACCCCCTGTAATTAATG
TCCTTTACATTCAGATCTTTATTTTTTCAGGCAGCTGATCAATTGGCTGT
GCGTCAAAAAAGAAGAATTTATGATATAACAAATGTACTGGAAGGTATTG
GTTTGATAGAAAAGAAGTCCAAGAATAGCATACAGTGGAAGTATGATAGT
TCTTTTGTCACTTTTTCAGTTTTGACATTTCTGGACCTACCTCCGGGTAC
CCCGGTGGAGGTCCTTTAAATTAACGTTCGTTCGTTACCAGCTTTTTTCG
GGATTAGCTCATTACTTTGTTCTGTTTTTTGGCACAATGATGCAAAATGA
TGATTCCTAAAAAGTGACGGAGCCCGATTTTAGAAAAAAACAATTTTCCG
GCCGAAAAAGCTGGAAATATGCTGGGAAAAAACGTTTTTTTGGCATTTTC
TCGAGATATTATAATTAGCTTTTTCTTATTCTTTGCTCAAAGGTGCGTAT
TAACAATGCCCAAAACATGGCCGAGTCCGATTTTTGAGAAAATTTCTTTT
CCAGTTGAAAATGCCGGAAATCGTCGTTTTTGCAGATTTTCATTGGATTT
TGTCCTTATATTTCTATGTTCTTCACACAAAAACATTATTGATAACAATG
CTCACCATCAAGCATGATTCAATGGTCAATAAAACTGATTTTTGCGACCA
GAANATTTTTGCGACCAGAACTTTCTATTTNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNATTTTTTCCCTACAACCCTTCCCTCTCCC
CCCATCAACAATCAATGATGAATTTATTGTGTTATGCATTTTCGCTAAAC
GCTATATTTTCTGACTGATTTTTTTTCATTTTTCTCCTCGCATTGCTATC
TAACTTTCATCATCAGTTAGGTCCATTCAGCATCTAGCTTGTTATAATTA
TTATCCTTATAACATTTTTTGAGTCCTTGTAGTTTCACTCAGGCTGACAA
TATTGAAAGGCTTGGTGAAACTCATTCGAATGATTTCATCCACACGTCAA
ATAATAATCTATGGTTATAAGAGCGAAAGTGAGATAGTGATTGCCATTGT
GTTGATGTTGAAATAAGATTTTTGACTAGAAAAACAACTTTTTATAACGT
TTTAATGCCAGATTAATTAAATCAAAGAAGTAGAACTTATTAGAAGTGTC
TTTTTGCACACAGCTCCACATTTATGTCCATTTGATCTTTTTGATAAGCC
CACACAATATTGTATTGATTTTCGCAAAACCAATTCTGTTTCAGGGGTGC
AGGACCAGGCTGCAATTCAAGCGAAGTGTCAGCAAAATTAAGAGACTTAA
AAACTGAATTAGACAGGCTTGATAGTATTGAACGTATACTTGATGAACAA
AAACTATGGGTCCAGCAAAGTTTAAAAAATGTATCTGAAGACCCAGATAA
TGAACGACATGCATATGTATCACATGATGATATTTGTAACTGTTACCAAG
GTGAAACATTGCTAGCTATCCAAGCACCCTCAGGCACTCAACTTGAAGTA
CCACCACCTGAAATTGTAAGTTGATTTTCATTTTCCTTTTCGTTTTATCA
TCTTTAAACCAATATAATATTCAAGCATTCTTCACAAACATATTGACCTA
GAATCCAAAAAACATCTGTCGACCTTTAAAGTTGGACAGCTTGGAGAGGT
TGCTTTAGATAAATGAATTGTGGTTTAAAAAAAAAAAAAATTAAGATTTT
GAGGGCCTCTGGACTGCCCCGGACGGTTTTTTCCAAAACGAAGCCATAAC
CTTAGGACAGCCTAAACAAAGGCTTCAAGAAAGCTCAATTCCACTAAAAC
CCTGGGATCTTGTTCCTTGAGGACTTATAAATATATATAGTCCCAACATG
ACTGGGGAAAATTGACGCACAAGTTGGGTTTTGAAGTCATTTCCAGTCAA
TTTTCTCGAGTTACATTTGGAAATCAACTATATCCATTCAAAACTTCTCT
ATTTTGTTTTTCGAGAGCTATCGATTGGTATAAGTGGTTTTTTGAAATTT
GAAATTTTGTCAAATTTTAGGGGTCAAGAGGTTTTGCCTGTGACGTCAGT
TTTTGAGTCATAGCAAATTTTCCTAGACCTAAGCAAAAAAAAACCCTCGC
ACAAAAGTCTTTAAATACTTCATTCTTTGAATCGGACCAGGTTTGGTTGC
GTAGTATAAAAGATGTCACAGGTCCTAAGGGTTTTCTGATTTAGTTGTAT
CATATTTCTCTCTTAGCAACAAGGTCAACGTCCCAAGTATCAAATGCACC
TGAACAGTTCGAATGGCTCCATATGTGTACTACTTGTAAACCATGATACC
AAATCTGATACACCCGTTGTTGTCCCCGTTCCACCCCCGGACCAAGACGA
TTCGACTTCAAGAACAACATTACCTAGTTCGTCTTCCACAGCAACGGATA
CAAAGAAAAACGTCAAATCAAGTACAGTCATCAAAGAAGAGACGATAGAG
GAGCGCCTACAAAGTAAAATTTCTCCAATCATTATTAATTTTCTCGGACT
GAAGTTTTGGTTCCCTTTTTGCCGTACTAAGTTTTCGAGAACAGTCCATT
TTTAGATCCCTGGAGTAAACATTACTTAGTTTAGGTTGTTTTATTTGCAA
TTTTCATTATTGTATTGTTAAATTTTTTAGACCCAATGGCATCAGGTGGT
CAAGATCCTTCTCTCGTTGAATCTGAACAAATCACTGGTAAAATTTCCTT
TCAATTATGTAAAGCCTGCAATGACACTAAAATTATTTCTATCATGAACT
TGAACCTGGCCCTTTTAGCCTGTAAAATCTTCTAAAACTAATTTACTTTC
ATACTTNCTGGCCCTTTTATCCTGTAAAATCTTCTAAAACTGATTTACTT
TCATACTGCAGAACTTGAAGATATCAATCTGGACAATTTTTGCAAAGATA
CCGACGGTAGGAATTGGTTTTATTATTAATTTTATAACACTTTCATTCAT
CATACAAAATTTATTCTCTGAAAATGTGAAAGAAATTATTTCCAAGAAGA
TAAGGTATCTTTTTCAATAGTCCATGAACTATGACTGAGTTTTGAAGAAT
TTTATACAATCCCCTAGGTTTATAAAACTATGAAAATTATATTTTGTATA
AAATGAGCGCTTCATTGGAAAAATTAATATCCAGCAAGATGTGTATTTTT
TGAAAGTCAGCTCTAATAAAATCTTCTTCTTTTTCTCTAGCTTTTACGCC
ACTTTTAAGACTTTCACCACCTCCGGGAGACCAAGACTATTATTTTAATC
TGGACGATAGTGAGGGCGTTTGTGACTTATTTGATGTCCCATTGAAAGTA
TAATTATTGTTGGCTTTCGCTATGGTGGATTCTGGTTGATCGATGCCGCA
GGCCATTCTGTGTGCATTTTTTAAGTGGCAGGGGAGATGTTATTTGTGAA
AGATGTAGATTTATACATAATGTGGTTCTTGGATGCTTGGATAAACTGTT
CATTGAATAGTTTTATGGTCTTGATTGTTAAATCGATGATTATGTGTCCA
TTGAATGTGTAAATTGTACCAAATTTATATATTGGGCGCCTTCTGGTGAC
AAAATGAATGTAATCCTTTGGTGAATAACATCGTGATGGTGCTATATTGT
TCTTATTTTATCAAGAATGGCCATTCCAAGCCATATTGCTTTATTTCATC
AAGAATTGCCGTTTCAAGCCATTTTGCCTTGGTACCTGAATGGATACCTC
ACGCCAACGTTTTAAACTAGCATACAGTACGTAATTTGAATGAAAACAAC
AATAACAACAACAGCATCTAATCTTGTTTTCATCTCAAGGTAGGGAAAAA
TATGTTAACCCTCCTGGTTAAATTGATATCGTTTGAACAATAACTTGCGG
AAGGTTTGCAACTTTTGTCCTGTCAGTTTGAAGTTTCAATTTTAGATTTT
TATTCGATTTTTGACTTACTTTTGAACAGAGAGATTTGTTACCATTTATT
AGAATATTAGCTCAGATTATTTACATTATATAATTGTTTTTTAGAAAATT
TTCGAAGCCCTTTTCTTTCGAACATAATAAGTGGTTTTATATTAATTCTT
TATTTATTTACATACAGATTTATGATTTGTTTGTTGTTTTTGTGTATATC
CTTTGCGTGGTTGTGCTTTTACTGAATCTTTCTCTTTTAAACGCTTTGCG
ATGTTATCAATGTTGTGATTTTATTTATGAAGTTTAAAAAAATTTATGCG
ACCTCGTACCATTGAGGACTTGATTAATTTTTTTACTTGATGATATTCCA
CTCACAAATATCTTTTCAACGAGCAAAAAATCGCAATGTCATTCCAAATT
CTATCAAGAGCTACACCCATTTTTGGTCTCAGCTGCAAATTATTTTGAGA
TTGGCCATATTCAACACTCGAGCACTTTGATATGATACATATGTTCACAA
CAGCATGGTTTAGGGCATAATATGTTAATAGCTCAATTCTTATAACAGAT
TATAAATATTATATAGAATATTGTATGCTATATTTTGATTTGATGTTTTG
AAAGCATAACCTAGTAGTAGAAAAAACACCTAGATAGAATGATAGAAACA
CAGAAAAAACGTTCGACAACGATTCTATGCTTTCCTTCGAAGTAAAGGAA
CGTTTTTCAACTGAAATTTCACTAACGTAATA Coding sequence (CDS) from alignment at sc0000385:7150..15831- >TCONS_00021350 ID=TCONS_00021350|Name=TCONS_00021350|organism=Clytia hemisphaerica|type=CDS|length=6804bp|location=Sequence derived from alignment at sc0000385:7150..15831- (Clytia hemisphaerica) CTTTTACGCCACTTTTAAGACTTTCACCACCTCCGGGAGACCAAGACTAT TATTTTAATCTGGACGATAGTGAGGGCGTTTGTGACTTATTTGATGTCCC ATTGAAAGTATAAAACTTGAAGATATCAATCTGGACAATTTTTGCAAAGA TACCGACGACCCAATGGCATCAGGTGGTCAAGATCCTTCTCTCGTTGAAT CTGAACAAATCACTGCAACAAGGTCAACGTCCCAAGTATCAAATGCACCT GAACAGTTCGAATGGCTCCATATGTGTACTACTTGTAAACCATGATACCA AATCTGATACACCCGTTGTTGTCCCCGTTCCACCCCCGGACCAAGACGAT TCGACTTCAAGAACAACATTACCTAGTTCGTCTTCCACAGCAACGGATAC AAAGAAAAACGTCAAATCAAGTACAGTCATCAAAGAAGAGACGATAGAGG AGCGCCTACAAAGGGTGCAGGACCAGGCTGCAATTCAAGCGAAGTGTCAG CAAAATTAAGAGACTTAAAAACTGAATTAGACAGGCTTGATAGTATTGAA CGTATACTTGATGAACAAAAACTATGGGTCCAGCAAAGTTTAAAAAATGT ATCTGAAGACCCAGATAATGAACGACATGCATATGTATCACATGATGATA TTTGTAACTGTTACCAAGGTGAAACATTGCTAGCTATCCAAGCACCCTCA GGCACTCAACTTGAAGTACCACCACCTGAAATTGCAGCTGATCAATTGGC TGTGCGTCAAAAAAGAAGAATTTATGATATAACAAATGTACTGGAAGGTA TTGGTTTGATAGAAAAGAAGTCCAAGAATAGCATACAGTGGAAATGGCGA CGGAATTCAATTCTCCGAGCACCCCAAGCGCAAGCCGTCATGAAAAATCT CTTGGTTTGTTAACAACGAAATTCGTAACTCTTCTACAGGAAGCTAAGGA TGGAGTACTTGATTTAAAAGTGCTTTTACGCCACTTTTAAGACTTTCACC ACCTCCGGGAGACCAAGACTATTATTTTAATCTGGACGATAGTGAGGGCG TTTGTGACTTATTTGATGTCCCATTGAAAGTATAAAACTTGAAGATATCA ATCTGGACAATTTTTGCAAAGATACCGACGACCCAATGGCATCAGGTGGT CAAGATCCTTCTCTCGTTGAATCTGAACAAATCACTGCAACAAGGTCAAC GTCCCAAGTATCAAATGCACCTGAACAGTTCGAATGGCTCCATATGTGTA CTACTTGTAAACCATGATACCAAATCTGATACACCCGTTGTTGTCCCCGT TCCACCCCCGGACCAAGACGATTCGACTTCAAGAACAACATTACCTAGTT CGTCTTCCACAGCAACGGATACAAAGAAAAACGTCAAATCAAGTACAGTC ATCAAAGAAGAGACGATAGAGGAGCGCCTACAAAGGGTGCAGGACCAGGC TGCAATTCAAGCGAAGTGTCAGCAAAATTAAGAGACTTAAAAACTGAATT AGACAGGCTTGATAGTATTGAACGTATACTTGATGAACAAAAACTATGGG TCCAGCAAAGTTTAAAAAATGTATCTGAAGACCCAGATAATGAACGACAT GCATATGTATCACATGATGATATTTGTAACTGTTACCAAGGTGAAACATT GCTAGCTATCCAAGCACCCTCAGGCACTCAACTTGAAGTACCACCACCTG AAATTGCAGCTGATCAATTGGCTGTGCGTCAAAAAAGAAGAATTTATGAT ATAACAAATGTACTGGAAGGTATTGGTTTGATAGAAAAGAAGTCCAAGAA TAGCATACAGTGGAAATGGCGACGGAATTCAATTCTCCGAGCACCCCAAG CGCAAGCCGTCATGAAAAATCTCTTGGTTTGTTAACAACGAAATTCGTAA CTCTTCTACAGGAAGCTAAGGATGGAGTACTTGATTTAAAAGTGCTTTTA CGCCACTTTTAAGACTTTCACCACCTCCGGGAGACCAAGACTATTATTTT AATCTGGACGATAGTGAGGGCGTTTGTGACTTATTTGATGTCCCATTGAA AGTATAAAACTTGAAGATATCAATCTGGACAATTTTTGCAAAGATACCGA CGACCCAATGGCATCAGGTGGTCAAGATCCTTCTCTCGTTGAATCTGAAC AAATCACTGCAACAAGGTCAACGTCCCAAGTATCAAATGCACCTGAACAG TTCGAATGGCTCCATATGTGTACTACTTGTAAACCATGATACCAAATCTG ATACACCCGTTGTTGTCCCCGTTCCACCCCCGGACCAAGACGATTCGACT TCAAGAACAACATTACCTAGTTCGTCTTCCACAGCAACGGATACAAAGAA AAACGTCAAATCAAGTACAGTCATCAAAGAAGAGACGATAGAGGAGCGCC TACAAAGGGTGCAGGACCAGGCTGCAATTCAAGCGAAGTGTCAGCAAAAT TAAGAGACTTAAAAACTGAATTAGACAGGCTTGATAGTATTGAACGTATA CTTGATGAACAAAAACTATGGGTCCAGCAAAGTTTAAAAAATGTATCTGA AGACCCAGATAATGAACGACATGCATATGTATCACATGATGATATTTGTA ACTGTTACCAAGGTGAAACATTGCTAGCTATCCAAGCACCCTCAGGCACT CAACTTGAAGTACCACCACCTGAAATTGCAGCTGATCAATTGGCTGTGCG TCAAAAAAGAAGAATTTATGATATAACAAATGTACTGGAAGGTATTGGTT TGATAGAAAAGAAGTCCAAGAATAGCATACAGTGGAAATGGCGACGGAAT TCAATTCTCCGAGCACCCCAAGCGCAAGCCGTCATGAAAAATCTCTTGGT TTGTTAACAACGAAATTCGTAACTCTTCTACAGGAAGCTAAGGATGGAGT ACTTGATTTAAAAGTGCTTTTACGCCACTTTTAAGACTTTCACCACCTCC GGGAGACCAAGACTATTATTTTAATCTGGACGATAGTGAGGGCGTTTGTG ACTTATTTGATGTCCCATTGAAAGTATAAAACTTGAAGATATCAATCTGG ACAATTTTTGCAAAGATACCGACGACCCAATGGCATCAGGTGGTCAAGAT CCTTCTCTCGTTGAATCTGAACAAATCACTGCAACAAGGTCAACGTCCCA AGTATCAAATGCACCTGAACAGTTCGAATGGCTCCATATGTGTACTACTT GTAAACCATGATACCAAATCTGATACACCCGTTGTTGTCCCCGTTCCACC CCCGGACCAAGACGATTCGACTTCAAGAACAACATTACCTAGTTCGTCTT CCACAGCAACGGATACAAAGAAAAACGTCAAATCAAGTACAGTCATCAAA GAAGAGACGATAGAGGAGCGCCTACAAAGGGTGCAGGACCAGGCTGCAAT TCAAGCGAAGTGTCAGCAAAATTAAGAGACTTAAAAACTGAATTAGACAG GCTTGATAGTATTGAACGTATACTTGATGAACAAAAACTATGGGTCCAGC AAAGTTTAAAAAATGTATCTGAAGACCCAGATAATGAACGACATGCATAT GTATCACATGATGATATTTGTAACTGTTACCAAGGTGAAACATTGCTAGC TATCCAAGCACCCTCAGGCACTCAACTTGAAGTACCACCACCTGAAATTG CAGCTGATCAATTGGCTGTGCGTCAAAAAAGAAGAATTTATGATATAACA AATGTACTGGAAGGTATTGGTTTGATAGAAAAGAAGTCCAAGAATAGCAT ACAGTGGAAATGGCGACGGAATTCAATTCTCCGAGCACCCCAAGCGCAAG CCGTCATGAAAAATCTCTTGGTTTGTTAACAACGAAATTCGTAACTCTTC TACAGGAAGCTAAGGATGGAGTACTTGATTTAAAAGTGCTTTTACGCCAC TTTTAAGACTTTCACCACCTCCGGGAGACCAAGACTATTATTTTAATCTG GACGATAGTGAGGGCGTTTGTGACTTATTTGATGTCCCATTGAAAGTATA AAACTTGAAGATATCAATCTGGACAATTTTTGCAAAGATACCGACGACCC AATGGCATCAGGTGGTCAAGATCCTTCTCTCGTTGAATCTGAACAAATCA CTGCAACAAGGTCAACGTCCCAAGTATCAAATGCACCTGAACAGTTCGAA TGGCTCCATATGTGTACTACTTGTAAACCATGATACCAAATCTGATACAC CCGTTGTTGTCCCCGTTCCACCCCCGGACCAAGACGATTCGACTTCAAGA ACAACATTACCTAGTTCGTCTTCCACAGCAACGGATACAAAGAAAAACGT CAAATCAAGTACAGTCATCAAAGAAGAGACGATAGAGGAGCGCCTACAAA GGGTGCAGGACCAGGCTGCAATTCAAGCGAAGTGTCAGCAAAATTAAGAG ACTTAAAAACTGAATTAGACAGGCTTGATAGTATTGAACGTATACTTGAT GAACAAAAACTATGGGTCCAGCAAAGTTTAAAAAATGTATCTGAAGACCC AGATAATGAACGACATGCATATGTATCACATGATGATATTTGTAACTGTT ACCAAGGTGAAACATTGCTAGCTATCCAAGCACCCTCAGGCACTCAACTT GAAGTACCACCACCTGAAATTGCAGCTGATCAATTGGCTGTGCGTCAAAA AAGAAGAATTTATGATATAACAAATGTACTGGAAGGTATTGGTTTGATAG AAAAGAAGTCCAAGAATAGCATACAGTGGAAATGGCGACGGAATTCAATT CTCCGAGCACCCCAAGCGCAAGCCGTCATGAAAAATCTCTTGGTTTGTTA ACAACGAAATTCGTAACTCTTCTACAGGAAGCTAAGGATGGAGTACTTGA TTTAAAAGTGCTTTTACGCCACTTTTAAGACTTTCACCACCTCCGGGAGA CCAAGACTATTATTTTAATCTGGACGATAGTGAGGGCGTTTGTGACTTAT TTGATGTCCCATTGAAAGTATAAAACTTGAAGATATCAATCTGGACAATT TTTGCAAAGATACCGACGACCCAATGGCATCAGGTGGTCAAGATCCTTCT CTCGTTGAATCTGAACAAATCACTGCAACAAGGTCAACGTCCCAAGTATC AAATGCACCTGAACAGTTCGAATGGCTCCATATGTGTACTACTTGTAAAC CATGATACCAAATCTGATACACCCGTTGTTGTCCCCGTTCCACCCCCGGA CCAAGACGATTCGACTTCAAGAACAACATTACCTAGTTCGTCTTCCACAG CAACGGATACAAAGAAAAACGTCAAATCAAGTACAGTCATCAAAGAAGAG ACGATAGAGGAGCGCCTACAAAGGGTGCAGGACCAGGCTGCAATTCAAGC GAAGTGTCAGCAAAATTAAGAGACTTAAAAACTGAATTAGACAGGCTTGA TAGTATTGAACGTATACTTGATGAACAAAAACTATGGGTCCAGCAAAGTT TAAAAAATGTATCTGAAGACCCAGATAATGAACGACATGCATATGTATCA CATGATGATATTTGTAACTGTTACCAAGGTGAAACATTGCTAGCTATCCA AGCACCCTCAGGCACTCAACTTGAAGTACCACCACCTGAAATTGCAGCTG ATCAATTGGCTGTGCGTCAAAAAAGAAGAATTTATGATATAACAAATGTA CTGGAAGGTATTGGTTTGATAGAAAAGAAGTCCAAGAATAGCATACAGTG GAAATGGCGACGGAATTCAATTCTCCGAGCACCCCAAGCGCAAGCCGTCA TGAAAAATCTCTTGGTTTGTTAACAACGAAATTCGTAACTCTTCTACAGG AAGCTAAGGATGGAGTACTTGATTTAAAAGTGCTTTTACGCCACTTTTAA GACTTTCACCACCTCCGGGAGACCAAGACTATTATTTTAATCTGGACGAT AGTGAGGGCGTTTGTGACTTATTTGATGTCCCATTGAAAGTATAAAACTT GAAGATATCAATCTGGACAATTTTTGCAAAGATACCGACGACCCAATGGC ATCAGGTGGTCAAGATCCTTCTCTCGTTGAATCTGAACAAATCACTGCAA CAAGGTCAACGTCCCAAGTATCAAATGCACCTGAACAGTTCGAATGGCTC CATATGTGTACTACTTGTAAACCATGATACCAAATCTGATACACCCGTTG TTGTCCCCGTTCCACCCCCGGACCAAGACGATTCGACTTCAAGAACAACA TTACCTAGTTCGTCTTCCACAGCAACGGATACAAAGAAAAACGTCAAATC AAGTACAGTCATCAAAGAAGAGACGATAGAGGAGCGCCTACAAAGGGTGC AGGACCAGGCTGCAATTCAAGCGAAGTGTCAGCAAAATTAAGAGACTTAA AAACTGAATTAGACAGGCTTGATAGTATTGAACGTATACTTGATGAACAA AAACTATGGGTCCAGCAAAGTTTAAAAAATGTATCTGAAGACCCAGATAA TGAACGACATGCATATGTATCACATGATGATATTTGTAACTGTTACCAAG GTGAAACATTGCTAGCTATCCAAGCACCCTCAGGCACTCAACTTGAAGTA CCACCACCTGAAATTGCAGCTGATCAATTGGCTGTGCGTCAAAAAAGAAG AATTTATGATATAACAAATGTACTGGAAGGTATTGGTTTGATAGAAAAGA AGTCCAAGAATAGCATACAGTGGAAATGGCGACGGAATTCAATTCTCCGA GCACCCCAAGCGCAAGCCGTCATGAAAAATCTCTTGGTTTGTTAACAACG AAATTCGTAACTCTTCTACAGGAAGCTAAGGATGGAGTACTTGATTTAAA AGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
Feature Name | Unique Name | Species | Type |
TCONS_00021350-exon-sc0000385-1575043694:15539..15831 | TCONS_00021350-exon-sc0000385-1575043694:15539..15831 | Clytia hemisphaerica | exon |
TCONS_00021350-exon-sc0000385-1575043694:11692..11801 | TCONS_00021350-exon-sc0000385-1575043694:11692..11801 | Clytia hemisphaerica | exon |
TCONS_00021350-exon-sc0000385-1575043694:10267..10537 | TCONS_00021350-exon-sc0000385-1575043694:10267..10537 | Clytia hemisphaerica | exon |
TCONS_00021350-exon-sc0000385-1575043694:9319..9565 | TCONS_00021350-exon-sc0000385-1575043694:9319..9565 | Clytia hemisphaerica | exon |
TCONS_00021350-exon-sc0000385-1575043694:9095..9151 | TCONS_00021350-exon-sc0000385-1575043694:9095..9151 | Clytia hemisphaerica | exon |
TCONS_00021350-exon-sc0000385-1575043694:8876..8920 | TCONS_00021350-exon-sc0000385-1575043694:8876..8920 | Clytia hemisphaerica | exon |
TCONS_00021350-exon-sc0000385-1575043694:7150..8591 | TCONS_00021350-exon-sc0000385-1575043694:7150..8591 | Clytia hemisphaerica | exon |
TCONS_00021350-exon-sc0000385-1510915933:15539..15831 | TCONS_00021350-exon-sc0000385-1510915933:15539..15831 | Clytia hemisphaerica | exon |
TCONS_00021350-exon-sc0000385-1510915933:11692..11801 | TCONS_00021350-exon-sc0000385-1510915933:11692..11801 | Clytia hemisphaerica | exon |
TCONS_00021350-exon-sc0000385-1510915933:10267..10537 | TCONS_00021350-exon-sc0000385-1510915933:10267..10537 | Clytia hemisphaerica | exon |
TCONS_00021350-exon-sc0000385-1510915933:9319..9565 | TCONS_00021350-exon-sc0000385-1510915933:9319..9565 | Clytia hemisphaerica | exon |
TCONS_00021350-exon-sc0000385-1510915933:9095..9151 | TCONS_00021350-exon-sc0000385-1510915933:9095..9151 | Clytia hemisphaerica | exon |
TCONS_00021350-exon-sc0000385-1510915933:8876..8920 | TCONS_00021350-exon-sc0000385-1510915933:8876..8920 | Clytia hemisphaerica | exon |
TCONS_00021350-exon-sc0000385-1510915933:7150..8591 | TCONS_00021350-exon-sc0000385-1510915933:7150..8591 | Clytia hemisphaerica | exon |
TCONS_00021350-exon-sc0000385-1491911889:15539..15831 | TCONS_00021350-exon-sc0000385-1491911889:15539..15831 | Clytia hemisphaerica | exon |
TCONS_00021350-exon-sc0000385-1491911889:11692..11801 | TCONS_00021350-exon-sc0000385-1491911889:11692..11801 | Clytia hemisphaerica | exon |
TCONS_00021350-exon-sc0000385-1491911889:10267..10537 | TCONS_00021350-exon-sc0000385-1491911889:10267..10537 | Clytia hemisphaerica | exon |
TCONS_00021350-exon-sc0000385-1491911889:9319..9565 | TCONS_00021350-exon-sc0000385-1491911889:9319..9565 | Clytia hemisphaerica | exon |
TCONS_00021350-exon-sc0000385-1491911889:9095..9151 | TCONS_00021350-exon-sc0000385-1491911889:9095..9151 | Clytia hemisphaerica | exon |
TCONS_00021350-exon-sc0000385-1491911889:8876..8920 | TCONS_00021350-exon-sc0000385-1491911889:8876..8920 | Clytia hemisphaerica | exon |
TCONS_00021350-exon-sc0000385-1491911889:7150..8591 | TCONS_00021350-exon-sc0000385-1491911889:7150..8591 | Clytia hemisphaerica | exon |
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
sc0000385 | supercontig | sc0000385:7150..15831 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
Term | Definition |
GO:0003700 | transcription factor activity, sequence-specific DNA binding |
GO:0046983 | protein dimerization activity |
Vocabulary: Biological Process
Term | Definition |
GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Cellular Component
Term | Definition |
GO:0005667 | transcription factor complex |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category |
Term Accession |
Term Name |
biological_process |
GO:0006355 |
regulation of transcription, DNA-templated |
cellular_component |
GO:0005667 |
transcription factor complex |
molecular_function |
GO:0046983 |
protein dimerization activity |
molecular_function |
GO:0003700 |
transcription factor activity, sequence-specific DNA binding |
Blast
BLAST of TCONS_00021350 vs. Swiss-Prot (Human)
Match: E2F5 (Transcription factor E2F5 OS=Homo sapiens GN=E2F5 PE=1 SV=1) HSP 1 Score: 307.76 bits (787), Expect = 3.092e-96 Identity = 183/312 (58.65%), Postives = 220/312 (70.51%), Query Frame = 3
Query: 201 ASRHEKSLGLLTTKFVTLLQEAKDGVLDLKVAADQLAVRQKRRIYDITNVLEGIGLIEKKSKNSIQWKGAGPGCNSSEVSAKLRDLKTELDRLDSIERILDEQKLWVQQSLKNVSEDPDNERHAYVSHDDICNCYQGETLLAIQAPSGTQLEVPPPEIQQGQRPKYQMHLNSSNGSICVLLVNHDTKSDTXXXXXXXXXDQXXXXXXXXXXXXXXXXXXXKKNVKSSTVIKEETIEER---LQNPMASGGQDPSLVESEQITELEDINLDNFCKDTDAFTPLLRLSPPPGDQDYYFNLDDSEGVCDLFDVPL 1127
+SRHEKSLGLLTTKFV+LLQEAKDGVLDLK AAD LAVRQKRRIYDITNVLEGI LIEKKSKNSIQWKG G GCN+ EV +LR LK E++ L+ ER LD+QKLW+QQS+KNV +D N R +YV+H+DICNC+ G+TLLAIQAPSGTQLEVP PE+ Q + KYQ++L S +G I VLL+N ++ S PVV PVPPPD T S S T +K+ ++ + E+ + ER LQ A+ + + I EL +D F PLLRLSP P D DY FNLDD+EGVCDLFDV +
Sbjct: 48 SSRHEKSLGLLTTKFVSLLQEAKDGVLDLKAAADTLAVRQKRRIYDITNVLEGIDLIEKKSKNSIQWKGVGAGCNTKEVIDRLRYLKAEIEDLELKERELDQQKLWLQQSIKNVMDDSINNRFSYVTHEDICNCFNGDTLLAIQAPSGTQLEVPIPEMGQNGQKKYQINLKSHSGPIHVLLINKESSSSKPVVFPVPPPDD-----LTQPSSQSLTPVTPQKSSMATQNLPEQHVSERSQALQQTSATDISSAGSISGDIIDEL---------MSSDVF-PLLRLSPTPAD-DYNFNLDDNEGVCDLFDVQI 343
The following BLAST results are available for this feature:
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