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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00021407 ID=TCONS_00021407|Name=TCONS_00021407|organism=Clytia hemisphaerica|type=transcript|length=1379bp
CATCATAACTTTCTTCGTCAGCAAGGCCAAAAACTTCACGGGTTGAGACG
AGTAGTTCTGTAATTTTCACCACACTGTTGTTAAAGGGCATATATACATA
CAACCATATGAAAAGGGCTGGCCGATTGGTCTAAAGGTGATACGGGTTTC
GGTTtctttaaagtaacttttggtATCGGGGCTTTACCCTTTTTTGTAGA
CTTTGATTTTAGAGATTTTGATTTggatttggaaaattattaGACTAACG
AAGGAacactttcaaaaaagtgaGGAAAGAAAAGGTTGTTATGGATTTGA
ACAATCACCTTCTTTTGAATTCACCAATCTCTCATTAAAACTGTGTAGCT
CCTCTGCCACCATGGCTGAATTGAAAGCTTTCCTTTTGCACTCTTTGTGC
CATCGATTTTTCCTAACTTTCATATGATTTTCCCATAAGCAATCTTCGCA
GCACTCCACTTCGGAGTCCATCAAGCGCCATGatgttttttcacatttct
caGAATCAAAAACCCGATcttcgaaaagaaaacttttggcCCAAAGTGCC
TATTAGATGTTCATTACGATGGAGCAATTTTCTCCATCAACAAATTCATT
TGCAAATGCATTGGTTTCTGCATGTTTAATTTCGGGTAACAGAATTCGCC
GTACTTATTCAATAGCATGACTCAAAAAATCACTGTAAAATCACAAACTG
CTGTTTGGAGGTGATAAAAGTTACCCCTCATTTATGACGGTAGCACAAGT
GTAAAAAGCATGAAGAGTTTTTAAAGGCACAGCAACAGCTATCACCAGCT
TGAGGATTTTTCTTTGTGGTGGCGGGTTTTCAATATATCAAACTTCATTT
GCAACTTGTTCTTTTTACATTTCTGCAGAAAAAACCCTACCTCTatacat
tttctgaaaatcttcATCAAACAAATCGATTTTCAAGTGCACACAGTTAA
TGTGTTCTTGTTTTCCATTTGAGTTTGTCCGTCCTGTTAACATTTTCTTG
CATGTACAACCCAAATTTTGGCCAGTGATGATTTTTTCAAGTCTTTCTCT
atcctttttgaaaatcttcatcaaaCAAATCGATTTTCAAGTGCACACAG
TTAATGTGTTCTGGTTTTCCATTTGAGTTTGTCCGTCCTGTCAACATTTT
CTTCCCTGTACAACCCAAATTTTGGCCAGTGATGATTTTCCCAAGTCTTT
TCACCTCAGAGTCTGTCAACTTTTGTGTGAAAGTCTAGCAACGTTCGTTA
GACTGATTACAAGGCAACTTGTTTTGCAAACTATATTGGCCGAGTGTCTG
CAATCTTTTAAGTAGTTGGCGCACTAAATTGTACAAGGGTCTAGCTTCAA
AATTGACGGATTTCTAAAAAACTATGCCT Run BLAST on NCBI transcript from alignment at sc0000385:158577..159955 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00021407 ID=TCONS_00021407|Name=TCONS_00021407|organism=Clytia hemisphaerica|type=transcript|length=1379bp|location=Sequence derived from alignment at sc0000385:158577..159955 (Clytia hemisphaerica)
AGGCATAGTTTTTTAGAAATCCGTCAATTTTGAAGCTAGACCCTTGTACA
ATTTAGTGCGCCAACTACTTAAAAGATTGCAGACACTCGGCCAATATAGT
TTGCAAAACAAGTTGCCTTGTAATCAGTCTAACGAACGTTGCTAGACTTT
CACACAAAAGTTGACAGACTCTGAGGTGAAAAGACTTGGGAAAATCATCA
CTGGCCAAAATTTGGGTTGTACAGGGAAGAAAATGTTGACAGGACGGACA
AACTCAAATGGAAAACCAGAACACATTAACTGTGTGCACTTGAAAATCGA
TTTGtttgatgaagattttcaaaaaggatAGAGAAAGACTTGAAAAAATC
ATCACTGGCCAAAATTTGGGTTGTACATGCAAGAAAATGTTAACAGGACG
GACAAACTCAAATGGAAAACAAGAACACATTAACTGTGTGCACTTGAAAA
TCGATTTGTTTGATgaagattttcagaaaatgtatAGAGGTAGGGTTTTT
TCTGCAGAAATGTAAAAAGAACAAGTTGCAAATGAAGTTTGATATATTGA
AAACCCGCCACCACAAAGAAAAATCCTCAAGCTGGTGATAGCTGTTGCTG
TGCCTTTAAAAACTCTTCATGCTTTTTACACTTGTGCTACCGTCATAAAT
GAGGGGTAACTTTTATCACCTCCAAACAGCAGTTTGTGATTTTACAGTGA
TTTTTTGAGTCATGCTATTGAATAAGTACGGCGAATTCTGTTACCCGAAA
TTAAACATGCAGAAACCAATGCATTTGCAAATGAATTTGTTGATGGAGAA
AATTGCTCCATCGTAATGAACATCTAATAGGCACTTTGGgccaaaagttt
tcttttcgaagATCGGGTTTTTGATTCtgagaaatgtgaaaaaacatCAT
GGCGCTTGATGGACTCCGAAGTGGAGTGCTGCGAAGATTGCTTATGGGAA
AATCATATGAAAGTTAGGAAAAATCGATGGCACAAAGAGTGCAAAAGGAA
AGCTTTCAATTCAGCCATGGTGGCAGAGGAGCTACACAGTTTTAATGAGA
GATTGGTGAATTCAAAAGAAGGTGATTGTTCAAATCCATAACAACCTTTT
CTTTCCtcacttttttgaaagtgtTCCTTCGTTAGTCtaataattttcca
aatccAAATCAAAATCTCTAAAATCAAAGTCTACAAAAAAGGGTAAAGCC
CCGATaccaaaagttactttaaagaAACCGAAACCCGTATCACCTTTAGA
CCAATCGGCCAGCCCTTTTCATATGGTTGTATGTATATATGCCCTTTAAC
AACAGTGTGGTGAAAATTACAGAACTACTCGTCTCAACCCGTGAAGTTTT
TGGCCTTGCTGACGAAGAAAGTTATGATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00021407-exon-sc0000385-1491911889:158577..159955 | TCONS_00021407-exon-sc0000385-1491911889:158577..159955 | Clytia hemisphaerica | exon |
| TCONS_00021407-exon-sc0000385-1510915933:158577..159955 | TCONS_00021407-exon-sc0000385-1510915933:158577..159955 | Clytia hemisphaerica | exon |
| TCONS_00021407-exon-sc0000385-1575043694:158577..159955 | TCONS_00021407-exon-sc0000385-1575043694:158577..159955 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000385 | supercontig | sc0000385:158577..159955 . |
Blast
The following BLAST results are available for this feature:
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