TCONS_00022146 (transcript) - C. hemisphaerica

Overview
NameTCONS_00022146
Unique NameTCONS_00022146
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1886

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00022146 ID=TCONS_00022146|Name=TCONS_00022146|organism=Clytia hemisphaerica|type=transcript|length=1886bp
ATTTTCATTTCTCTCTTATCTCATCAGCTCTGTTAAAACTACAAGTACAA
CAATGTCATTTCAAGACGATATACTATCCACCCACAATGAGAAGCGAAAA
AAGCACGGTGCACCACCATTGAAATGGTCCGACACATTGGAAAGGAAAGC
TACAAAGTGGGCGCAACATTTGGCCAAAATTGATCAGTTGAAGCATGAAC
AAAATGTGGAGGAAGGAGAAAATATCGCCATGGCCGGAGGGAAAGATTTG
ACTGGTGAAGGCGCGACAACCATGTGGTATGACGAAATTAAAGATTACAA
TTTCAATAAGCAAGGTGGATTCAACTCAAAAACAGGTCACTTCACTCAGA
TTGTCTGGGTTGCAAGTAAACAAATCGGAGCTGGAATTGCAAAATCCAAA
TCTGGACGTACCTATGTCGTCGCTAAATATCTACCAGCAGGGAATATGAT
GGGTAACTTTCCTGCCAATGTGAAACCATTAGgaagtgcactttccaaag
atCAAAACGCCAATGGCTCACCAATGACAATTGCAGATCCAAAACCAACT
CAAAAGAAAAGAACTACAACAAGCACACCGAACCGGCAAACTACCACGCA
AGGACGCCCTGCCATCCCGTTGCTGGCTATCATGTCTTTCATCGCTGGTT
TAGCATCGTTCGCTCTTTACTTAGCAGCTCTCGTTGGTACGCACTGGGAA
AAGGGCGACGCATCAAACCATTTAGGTTTATGGAAATGGTGCGATATCAA
TGAATGTATCGCAATACAAGATGTACCACACGCATTACGAGCAACACAGA
GTTTAAGTATCCTAGCAGCGGTTGCTGTATTCTTAGCTCTTGTACTAACT
GTTGGGAAAATGGTTTCGCCGAAGATAAGATATTTAGTACCAGCTTCTGT
TTTCGTCATGGGAGGTTTATTTGGGATCGTATCAGCGGCTGTTTATACTG
CAGAAGTTTCAGACTCTAGCCTGGATTATGGATGGTCATATGCACTAGCC
TGGGTTGGAGTCAGTTTTGCAGTACTTGCAAGTATATTGATGATAGCTTC
TCGATAACGCTTGGTAATCAagggcctatttgtttcatcGCTATTTTTAC
TGCATTTACTACAACTGcactcatttcaatttttttctgtccAAAtttta
agcactttttgtaaataaatttgCAAACTCCCTATCagtaaaaatagtaa
aaacctCAACCTTCTGCAAGCAATTGCATCTGAAATCAGACTGGATGATG
TTTTCTGGATGTTTTCTTAGCCAGATTGCCAATTTTAAGCCAATAAAGTT
AGAGGTGAAGAGCTGAAACTGTAGCTTGCTCCACACACGGGTCTATATCT
GAAATCAAAATAGCAGttattttcataatggcggaatAGTGGTCACACAG
CCGTGAATAAACAATTGATTGAAAGTtactttttaagatttaaagcaCAA
CCAGGGATCATCAAGGCAGACAACAAAACTTACAATATTTgctatcattt
tcaaagttttcatggaATTTCAAGCACTTTTAGCAGATAGCATCTACAGC
ATTTGTAGTAAGTGAAACAAATAGGCCCCAAATAAGACACCTGATCTCCC
AAGAAGAAGAGCtcgaaaatatttcaatttcatgtTTCTCGGTCGTTAAC
TACAACTACTTCATTTATGCTGTatagatttatttatttgtaacaaaaaa
tatgaactcgaaaaaaaaatcaatttggtTTTTGTATCACAAATGGACGT
CTACATTCGTTGCCCCAaactcgtacccagagccacttgtaCCACTTTTT
AGTTTTACTGATGATGGACGTAATACAACCCTTTCGTGAGCGTAAATGCT
AGCTAGCCATGCCTGGGGGTACTAGCTTTGCGAGAT
Run BLAST on NCBI

transcript from alignment at sc0000406:21989..32563+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00022146 ID=TCONS_00022146|Name=TCONS_00022146|organism=Clytia hemisphaerica|type=transcript|length=10575bp|location=Sequence derived from alignment at sc0000406:21989..32563+ (Clytia hemisphaerica)
ATTTTCATTTCTCTCTTATCTCATCAGCTCTGTTAAAACTACAAGTACAA
GTAAGTGGTtggtatattttcaattaaatttcttcttttgatagCTTATG
TCTTGCTTTATTTTTTCTCTTGGTGCAATTAGTTCAAATTGACATCAACA
TATTTCAAATTTGGTAGTAGCATCTTCATTCCATTTCGCAAATAATATAT
GAATAAAAATTAGGAGATAAGAAGTTCTGAAACAAACAATTGTTttacgc
ccccccccccagcggtttgcgtgaatgcgtgaatgggcttttttacTTGC
NagagatgacgcgttctttagaaaaagcaataaaatcctttgtctcaagA
TTCAACAATCAACCGAATCAtcgaaaaccttgtaaaaactccagcttgac
ccgaATGGGTggatgggctttttcacttgcgtgaatgcgtgtaaataaaa
ataaaattgcgtgaatgcgtgaattggaaagccttgcgtgaacaaaaatt
gcgtgaattgcgaaaaaacattgcgtgaatgcgtgaatttgggaaaaaaa
tttgcgtgattgcgtcAATTGAAAGTCCGCCGGAGGGGGGCCTCTTTTAC
CAAAGGATTTGAGGTCTTTACACCAAATACATCAAGCAACTATTGCAGCA
TAATGGATTTGGTTGGTGATACCTAGGGCAATTAAGTTATATTTCTGAAG
CTATTGCGCTGGTCGATTgtattttgacgtcatttaacTCATGTAAACTT
GAGCACACTGACCTTTATGTACCCTGGacaaagtttctcaatcccggtca
agcaaaatctttgatcggagtttgttttttgaaagtgCACTTCTCAATAC
AGAAGAAACCGGCGcttttctcttgattatacccctgtctccttaaaaga
tgtgttctgaaactttctagggttacctagacaacaaacACACGTTTgat
cttgattatacccctatctcgtcagaacacatcattatttctagctaACT
AATTTACACAGAtcttatcagaacagatcaaaatttctagctacTGAAAC
ATACTCCTAGGACACATCGGTAAAAGGGTCGTCTCTCCGGCTGCTTTTGT
CAATAGCGTTGTAAATGTaccgagagcgctagatctactttccttGAATT
TATAGTTTTGAAGATGCAGCGCCGttaaactttaatttttaacactgcaa
tggcttctttgcgggtaccactgAAAATAACTCTGAGCAAAGATTGTGGA
TATGGTTTGGTCCAaaataaaggtcagtgcttgAATCTCATCCTCATGCA
TGTAGTGTTAGGATTAATTTCTGTATTCGTAGACATCATGTTATGGAAAT
TCACtttgctgttaaagcgattcaTTTTTGTACACCATTTTAGCTGTTGA
CTCTATAGCAATGTCATTTCAAGACGATATACTATCCACCCACAATGAGA
AGCGAAAAAAGCACGGTGCACCACCATTGAAATGGTCCGACACATTGGAA
AGGAAAGCTACAAAGTGGGCGCAACATTTGGCCAAAATTGATCAGTTGAA
GCATGAACAAAATGTGGAGGAAGGAGAAAATATCGCCATGGCCGGAGGTA
ATGCCTTTCAAAATCtcgtttttttttgcactttttcaTCATAAAGCAAA
TTGTAACTTGGAAGAatatttgagttttcaaaagtttttttcttctttta
gtgCTTTTGCATCAAGAAGTCagtattaaaatttttgataaccAAGGCTC
GTAAAATGGCTATTTTACACGAGTTTTAGCGGCCGTAGTGCAAAGATAAG
AGACCTTTAGCATCTAGAACGGCGACTTGAACTAGGACGTGAGgtaaatc
ttaaaatcaaatgGCGAATCTTTTATCTAGATTtaatcatggaggtataa
agaaagacaggagaagtatgctattgtaaccaagctcgccctacgattaa
aaaagttacgatgtatgcatgctcataatctcatataNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttatttcatcg
ggcgagcttagaatttcttttgatacattttataaaagaaatcaaaagac
caattaccgacacattcaactcctgttttctttatacctctatgatttAA
TATGACATGGACAAATTTGAAATGTAGTCAAGTTTTTGTGATAAATGACG
TTATAATTTTCGAGGGATTCATGTCATTTAAAACTATTGTACTCTTCCTT
TATCGTTATCGTCCAAAATACGaggtcaaaaaagaattttcaatttgCTT
TGAGATTTGAAAACGTCGACTAATTACCCTATTATAAGTCACTATTCTCA
TGAGAGATTGATGTGAAAAGAATAGAATCTATAGTTGCAATCCAGATATC
AATCCATAAGGGCTTTCTATTTTGTTCAATTCTGCCTTACATTTTCAAAG
TTGCCGTCCTAGATGCTAAAGGTTCTTATAGAGCATTCGGCTACGGTGCA
CAATGTCGTGGCTTCTATCCCTGGCCAAGTCATAACAAAGATTCTAAGAT
AGCCTCCAAAATGCCTCACTGCTTcaatgctcagcaattaagagaatgaT
CGATAGTTAGTGAAGCAATCTGAGGAAAAAGATTGGCGTCCGCCCCCACC
CTCTGGTAGATGGTAGATAGCTCTCGAAAGGGGAGCCTTCGGCTGCGGTG
GCAAACTTTAGTACTCGATCTTATGGTTAACAAGCATCCTTTTACGTGTC
ATTTACAGGGAAAGATTTGACTGGTGAAGGCGCGACAACCATGTGGTATG
ACGAAATTAAAGATTACAATTTCAATAAGCAAGGTGGATTCAACTCAAAA
ACAGGTCACTTCACTCAGGTTTGAATACTACTATCGTTAAATCTTCATTA
TTACTGCATACAATCTTGTTATCAAAACTCTCTCATTAAAAACTCTCCTA
TCATTTACAATATGCCccgaaaaaaagtgtacaaatttTTCTATGGAGTA
ATCATCAATTctttcaatcaatagatattcaattcccaagatgattAAAA
AGGTTTTTGAGAATGAAATATTAAGTATAAGAGTCATAAAAGTTGGCATA
GattatgaggattttacttgATATAAACATCTGTCCGCTTTTTTGGAACA
CACTGTACATACACAGTTTTAAACAAAGgaaaaacaactttttaaaaatt
tatttgtttaatTATTCCGGAAAAATCTTCTTTAGATTGTCTGGGTTGCA
AGTAAACAAATCGGAGCTGGAATTGCAAAATCCAAATCTGGACGTACCTA
TGTCGTCGCTAAATATCTACCAGCAGGTAATATCATAACTCCTCTGTTTA
AGTGACGTAATGCTTAAATTCCTTATGCTGAAATCTTTCAAGAAAATTCA
CATCTTTAGTCGAATAACTGAAATTTTGTAGCTATTTACTTACTCTCCAG
GTACACGCCACACGCCACATGCCATATGCTAGTTAAGATATTCAGAGTGT
TACTGTTGTTATTGTTGTACTCTCTTATTCATTAAACCTGCTTAATACAG
TAGCATGTATTGAAGTTGTCTGTACAAAGACAACTCGGTATCTACGACTA
ATTTCCAAATTAAATATCGTAGAGGGtatgttgtcattgtcttttctggt
tTGAGATTTCTCAAACCGACCGCAGcaatggagtgttggtgagagaggag
AGACGATGGCagaagtaagtaagtaagtaatagtttatttcatgttgacg
aaaaggtagcaacaaaggctaataaaagtcaacgctactttacaattaaa
aaaaactaatgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNAACTAATGTTTTGTTGGCAGCTCATCGTCGCTGC
TACTGAGGctagatattgacagcttttggttggcaaagtttttgtttgtt
tttatcaagcgAAGGTTATCTGTCTGGGACTTCCTCTCACACGCCAAATG
AAATCACCATTACATTCGGAGTTCCATTTCTTAGCTTTTTCGCAcatctc
tttgatttttcttctttcattgatgGTGAAATCATCAGTGATGCTTAGAT
GATTTCCAAGCCACTTCAacttttttaaggctttaaggttgctcatgatt
ctttctttttcttcttcactttgcaAGGTCACCTTTATCGGACGATTTTT
CCTCGGCCCATTTTCATGTTCGAACCCAATACGATGTTGATGCGTTGGTT
TGATGTCGCGGATGTCGCGGATGCCGATATCTTTGAGCAGATcctcaatt
tcctttttgttCTTGATCTTCTTCTTTCGTTTCTTCAACTTGTTTAGGGA
GTCCatgaattatgtttttttttcttgatttgatgTCTCGTTTTCTCTCC
TCtcctcttctttttgttccgcgacaacagatttaagattttccttGTGT
GCTTTGGCTATATCAGCGTAGGTTTTACGGGATGACtctttcataaaatc
ttttgtctgttgtatctcttcttttatcattttccttgttttggcTTCTA
AGTCGGTCATCTTTAGTGTTAGGATTGTTTCgatatggcgcgccaaagcg
gaaataaatactatctctcaTTTCGCGAcaatatctttcatttcgcgaca
ctatctttcatttcgcgacactatcttttatttcgcgacactatctttca
tttcgcgacactatctttattAAAACGANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccgcgaaatgaaagat
agtgccgcgaaatgaaagatagtgccgcgaaatgaaagatagtgtcgcga
aatggaAGATAGTGTCGcaaaatgaaagatagtatttatttccgctttgg
cgcgccatagttTCGATGTCGTTGTTGATGACTTTGCGGTTTTTGGTCAg
ttcttttttgagttttttgatttcGTTGTCTTTCTTAGCAATCTGTTCTT
GCATCATATGGTACTTGTTTTCTCCGATTTTACTTCTTAAGGATCTCGTT
ATTCGCACACAATTGTGACATACGTATTGATTATTATAAGTGTTAGCGAA
GATTTACAGTTGGTAAAGTGGCAATTGTGTGCACTCGTAATTTACCATAC
GTTGACAGCTACGGCATTTGAGTCGATTTTGATCTTCATCATCATCTCGT
AGCCAGAGTCACTGGCAtaatctttttgattttactgatggactcAAAAA
TATCGAGATTTGTAAAATGAACTTTGGCTGGATACCAACAGAGTGATCAA
AAAATCGCGTGCTGGGATGGAGATAGGCTACATCAATACACGTAACAAGG
GTGCATGTTGCAGTTGTGTTTGCTGCTTCAATCGGTGGGTCTTGGGTGTT
TTTGTCGCGATTTTTATCATATTTAGCGaatttcgatgattttttgagtt
tccaccatttttttgaaagcgATGCAGAACACGTCTTAActaagtgacgt
caaaaagaagTGCTGCTAtctataaatcatacttcatggCAGAGGTCTCC
ATACggcaaattttttatcaaacagacaattgCGTACAGAGTAGTATTCA
AGAGGCCTCTTTGCTAAAAATTCGGCCTTAAAATCATGGATGAGTTTATT
CTTCATTCAATATTCCAGTAAGCACTCACTTAACTAATATAGAGAACTTT
TCCCTAGGGAATATGATGGGTAACTTTCCTGCCAATGTGAAACCATTAGg
aagtgcactttccaaagatCAAAACGCCAATGGCTCACCAATGACAATTG
CAGATCCAAAACCAACTCAAAAGAAAAGAACTACAACAAGCACACCGAAC
CGGCAAACTACCACGCAAGGTACCGTTACatttttaccttattacacaaa
tataactaaagtcattttattaacacgaattgaaaaatttcaaccccccc
cctcttaattaaaaccagccggtgtttccttgaaaaagcagaaaaattcg
tgttaatttcagatATCGTCCAAATTTCAAGGCTGTTGAATACTTggcta
gtaatattcgtgtaataaggtataccGAGTTTTACCTTATAGAGAGATGA
GTGCTCCGAGCCACGTTAATGATAAAAGTTttattaatcgtggacatttt
GCCTGTGTTTTCAAATATCTTGATCTTAAACGTCACTTTtcgaaaacatt
cgaaaatctttttttgttcaaatttctcACTTCAATGCAGCGATgcagca
attttttttcggacacttcggtgtgtttttcggacaaatatgacggtctc
aggccaAAATCTtagggtcaaaatttaatgaaaattttagcttgacaAAA
Gagctgttgtatatttttggaaagctctcaaaaaattaagagtagagata
tattgcaagaaTAGGTGATTtttgtacctaactcgagatattttacttca
aaaagtgcaaaaagtggagcaaatagctgtttctggctgaaaaacactat
ttttaagGCTCAATATCTTGAATTACCCGAAAAATTCAAGGCTCTGTTAT
AAAAAACGAAGGATATCTCAGATTGTTTGCTGATTccgacaaaaataaac
aatgtccacttaagggaacttattgcGGCgagtttttacaaaattctCCA
AACTTTATCTTCGCATTACAAAATTGCTGCCTTGTTAAAATTAAAGATTG
ACGTTTACTTGCCAAAGAAAgttcttttcaaaatcaaattgtTTTACGAT
TTGTGCTCCTTGCATGAATTAGTTCTCACCAAAAAGGTTTGCGCAGCGCA
ATGGGCCTTTAAAACACAACTGGtcgaaaaaatttgacttttgcgCCTAT
GGGCGCAATTATCAATCAACGAttccaggctaaaatcgaactacctgact
ttctattgtgcgcatgtgtaagaaaaaaccacatataattaatacctctt
atggtcaaatctttctttcttcattagtagaaaaaagtttaaagtaaTTA
TAAACCTTTATTGCTCGCCCGACTCGAGTCAATACATTGAATTTGCTTTT
GTGGTATGGCGATTCTGCAGCGGAAAAATATGCTGACAGTGCCAACACTG
CTGTGCCTTTACGCGGAGGGTCGGATAACGCCGCTTCTGTCTTTGTATAA
CCTTGACTTgatcaaaaaaataacaattatcTTTCTTTCAGGACGCCCTG
CCATCCCGTTGCTGGCTATCATGTCTTTCATCGCTGGTTTAGCATCGTTC
GCTCTTTACTTAGCAGCTCTCGTTGGTACGCACTGGGAAAAGGGCGACGC
ATCAAACCATTTAGGTTTATGGAAATGGTGCGATATCAATGAATGTATCG
CAATACAAGATGTACCACACGCATTACGAGCAACACAGAGTTTAAGTATC
CTAGCAGCGGTTGCTGTATTCTTAGCTCTTGTACTAACTGTTGGGAAAAT
GGTTTCGCCGAAGATAAGATATTTAGTACCAGCTTCTGTTTTCGTCATGG
GAGGTTTATTTGGGATCGTATCAGCGGCTGTTTATACTGCAGAAGTTTCA
GACTCTAGCCTGGATTATGGATGGTCATATGCACTAGCCTGGGTTGGAGT
CAGTTTTGCAGTACTTGCAAGTATATTGATGATAGCTTCTCGATAACGCT
TGGTAATCAagggcctatttgtttcatcGCTATTTTTACTGCATTTACTA
CAACTGcactcatttcaatttttttctgtccAAAttttaagcactttttg
taaataaatttgCAAACTCCCTATCagtaaaaatagtaaaaacctCAACC
TTCTGCAAGCAATTGCATCTGAAATCAGACTGGATGATGTTTTCTGGATG
TTTTCTTAGCCAGATTGCCAATTTTAAGCCAATAAAGTTAGAGGTGAAGA
GCTGAAACTGTAGCTTGCTCCACACACGGGTCTATATCTGAAATCAAAAT
AGCAGttattttcataatggcggaatAGTGGTCACACAGCCGTGAATAAA
CAATTGATTGAAAGTtactttttaagatttaaagcaCAACCAGGGATCAT
CAAGGCAGACAACAAAACTTACAATATTTgctatcattttcaaagttttc
atggaATTTCAAGCACTTTTAGCAGATAGCATCTACAGCATTTGTAGTAA
GTGAAACAAATAGGCCCCAAATAAGACACCTGATCTCCCAAGAAGAAGAG
CtcgaaaatatttcaatttcatgtTTCTCGGTCGTTAACTACAACTACTT
CATTTATGCTGTatagatttatttatttgtaacaaaaaatatgaactcga
aaaaaaaatcaatttggtTTTTGTATCACAAATGGACGTCTACATTCGTT
GCCCCAaactcgtacccagagccacttgtaCCACTTTTTAGTTTTACTGA
TGATGGACGTAATACAACCCTTTCGTGAGCGTAAATGCTAGCTAGCCATG
CCTGGGGGTACTAGCTTTGCGAGAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_012421XLOC_012421Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00022146-exon-sc0000406-1491911889:21989..22038TCONS_00022146-exon-sc0000406-1491911889:21989..22038Clytia hemisphaericaexon
TCONS_00022146-exon-sc0000406-1510915933:21989..22038TCONS_00022146-exon-sc0000406-1510915933:21989..22038Clytia hemisphaericaexon
TCONS_00022146-exon-sc0000406-1575043694:21989..22038TCONS_00022146-exon-sc0000406-1575043694:21989..22038Clytia hemisphaericaexon
TCONS_00022146-exon-sc0000406-1491911889:23397..23585TCONS_00022146-exon-sc0000406-1491911889:23397..23585Clytia hemisphaericaexon
TCONS_00022146-exon-sc0000406-1510915933:23397..23585TCONS_00022146-exon-sc0000406-1510915933:23397..23585Clytia hemisphaericaexon
TCONS_00022146-exon-sc0000406-1575043694:23397..23585TCONS_00022146-exon-sc0000406-1575043694:23397..23585Clytia hemisphaericaexon
TCONS_00022146-exon-sc0000406-1491911889:25747..25856TCONS_00022146-exon-sc0000406-1491911889:25747..25856Clytia hemisphaericaexon
TCONS_00022146-exon-sc0000406-1510915933:25747..25856TCONS_00022146-exon-sc0000406-1510915933:25747..25856Clytia hemisphaericaexon
TCONS_00022146-exon-sc0000406-1575043694:25747..25856TCONS_00022146-exon-sc0000406-1575043694:25747..25856Clytia hemisphaericaexon
TCONS_00022146-exon-sc0000406-1491911889:26224..26314TCONS_00022146-exon-sc0000406-1491911889:26224..26314Clytia hemisphaericaexon
TCONS_00022146-exon-sc0000406-1510915933:26224..26314TCONS_00022146-exon-sc0000406-1510915933:26224..26314Clytia hemisphaericaexon
TCONS_00022146-exon-sc0000406-1575043694:26224..26314TCONS_00022146-exon-sc0000406-1575043694:26224..26314Clytia hemisphaericaexon
TCONS_00022146-exon-sc0000406-1491911889:29796..29957TCONS_00022146-exon-sc0000406-1491911889:29796..29957Clytia hemisphaericaexon
TCONS_00022146-exon-sc0000406-1510915933:29796..29957TCONS_00022146-exon-sc0000406-1510915933:29796..29957Clytia hemisphaericaexon
TCONS_00022146-exon-sc0000406-1575043694:29796..29957TCONS_00022146-exon-sc0000406-1575043694:29796..29957Clytia hemisphaericaexon
TCONS_00022146-exon-sc0000406-1491911889:31280..32563TCONS_00022146-exon-sc0000406-1491911889:31280..32563Clytia hemisphaericaexon
TCONS_00022146-exon-sc0000406-1510915933:31280..32563TCONS_00022146-exon-sc0000406-1510915933:31280..32563Clytia hemisphaericaexon
TCONS_00022146-exon-sc0000406-1575043694:31280..32563TCONS_00022146-exon-sc0000406-1575043694:31280..32563Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000406supercontigsc0000406:21989..32563 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.159154	0.0829321	0	0	0	0	0	0	0.220529	0	0	0	0.712783	0.242545	0	0	0	0	2.73063	3.14135	0.250133	0.675981	0	0.603319	0	0	5.75303	6.58475	0.152911	0
Blast
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BLAST of TCONS_00022146 vs. Swiss-Prot (Human)
Match: GAPR1 (Golgi-associated plant pathogenesis-related protein 1 OS=Homo sapiens GN=GLIPR2 PE=1 SV=3)

HSP 1 Score: 123.635 bits (309), Expect = 2.531e-32
Identity = 67/150 (44.67%), Postives = 91/150 (60.67%), Query Frame = 2 
Query:   44 STTMSFQDDILSTHNEKRKKHGAPPLKWSDTLERKATKWAQHLAKIDQLKHEQNVEEG---ENIAMAGGKDLTGEGATTMWYDEIKDYNFNKQGGFNSKTGHFTQIVWVASKQIGAGIAKSKSGRTYVVAKYLPAGNMM--GNFPANVKP 478
            S +  F +++L  HNE R+KHG PPLK    L R+A ++++ LA    LKH      G   EN+A A   D TG+     WY EIK+YNF +Q GF S TGHFT +VW  +K++G G A +  G ++VVA+Y PAGN++  G F  NV P
Sbjct:    4 SASKQFHNEVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRGQCGENLAWAS-YDQTGKEVADRWYSEIKNYNF-QQPGFTSGTGHFTAMVWKNTKKMGVGKASASDGSSFVVARYFPAGNVVNEGFFEENVLP 151
The following BLAST results are available for this feature:
BLAST of TCONS_00022146 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GAPR12.531e-3244.67Golgi-associated plant pathogenesis-related protei... [more]
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