TCONS_00022626 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00022626
Unique Name	TCONS_00022626
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1489

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at sc0000429:174366..178970+
coding sequence from alignment at sc0000429:174366..178970+

transcript sequence

>TCONS_00022626 ID=TCONS_00022626|Name=TCONS_00022626|organism=Clytia hemisphaerica|type=transcript|length=1489bp
TTCTCTCTTTCTCtagtcaaaaaatatatataaataaaaGGAAAACAGAA
ATGGCAGCGCAACAAACAGCAGACGAAGGGATCACAAAGAAACTTGAAGA
AATCAATTTGGAAGATAAAGAACCATGTGTTTTAGTATTGGGGATGGCTG
GTTCTGGTAAAAGTTCTTTTGTTCAGagGTTGACTTCTCACTTGCACACT
AAAAAGCAACCACCATACGTAATCAACCTTGATCCTGCGATCAACGAGGT
CATATATCCTTGCAATATTGACATCCGAGACACAGTCGACTACAAAGAGG
TCATGAAACAATACAACCTCGGTCCAAACGGTGGCATTATGACGTCACTG
AATCTGTTTTCGACGAAATTCGATCAAGTTTTGAATTACTTGGAACAAAA
GAAAGATAAATCGAGTTTAGTGCTCATCGATACACCAGGACAAATTGAAG
CTTTCACCTGGTCTGCGTCGGGTTCGATCATAACAGAATCGTTAGCGACC
ACCTTCCCGTCTGTTATCGTGTACGTCATGGATACGGTACGCTCCGTCAG
TCCCGTCACGTTCATGTCGAATATGTTATACGCTTGTAGCATCATGTACA
AAACCAAACTTCCTTTCATCGTCGTACTAAGCAAGATCGATGTTATAGAC
CACAGTTTCATTAAAGAATGGATGGAGGATTTTGAGGTGTTCCAAGAAGC
CTTGGACGCTGACACTTCCTATACTTCCAACCTTGCACGATCCATGAGCC
TCGTTTTGGATGAGTTTTACTCACATCTAAACTGTGTTGGTGTTTCATCG
CTGACAGGGGATGGTATGGATGACTTCATGAAAGCTTTGGAGAATGCTGT
TCAAGAGTTTCATACAGAATACAAACAAAATCGTTCAGCAAAGAAAACGC
CTGTAGACGAAAAAGATTCAACAAAAAATGCGGAACCAAATTTAATCTTT
TCCTCGTCAGACGTGCATAAATTACAGGCTAGAGATGAAATCACCATATC
AAAACAATCTTCTGACATGAcgtaatgatgacgtcatattatCTCCCCAT
TTACAAAAATGCTTCAGTAATGGGATGAAAAGTATCATTCAAACTATCGA
TATATCGACCTGATGAAACGATATTGCTAAAAATCGACATTGCTGTTAAT
ACAGTATTAATGGGAAAACATTTTCTGTAGAATAGAACATTTTGTTGAGC
TGGAAAGCTCCGAACATTTAAGAAAACTTGAAGACATGCGAGCGAACCAG
ACTACTTTTCATGGACAATTTTATGGAAATTAGCtttgttaaaatttaaa
attatttaaagctCAGTACAGTATGGACATTATCTACTTGGTGTGGCTGA
TTGATGGGTCTTTGTCTTGAAAGTTAATTTTACCGAAGTCAATCATTAGC
TTCGTGGGTAATTTCTTTTCTAGGTTGCCACTGATagtaaaaatattgat
atttttgttgaaaaacgaTATTTTATAGATAAAATACAA

Run BLAST on NCBI

protein sequence of TCONS_00022626-protein

>TCONS_00022626-protein ID=TCONS_00022626-protein|Name=TCONS_00022626-protein|organism=Clytia hemisphaerica|type=polypeptide|length=340bp
LSFSSQKIYINKRKTEMAAQQTADEGITKKLEEINLEDKEPCVLVLGMAG
SGKSSFVQRLTSHLHTKKQPPYVINLDPAINEVIYPCNIDIRDTVDYKEV
MKQYNLGPNGGIMTSLNLFSTKFDQVLNYLEQKKDKSSLVLIDTPGQIEA
FTWSASGSIITESLATTFPSVIVYVMDTVRSVSPVTFMSNMLYACSIMYK
TKLPFIVVLSKIDVIDHSFIKEWMEDFEVFQEALDADTSYTSNLARSMSL
VLDEFYSHLNCVGVSSLTGDGMDDFMKALENAVQEFHTEYKQNRSAKKTP
VDEKDSTKNAEPNLIFSSSDVHKLQARDEITISKQSSDMT

Run BLAST on NCBI

transcript from alignment at sc0000429:174366..178970+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00022626 ID=TCONS_00022626|Name=TCONS_00022626|organism=Clytia hemisphaerica|type=transcript|length=4605bp|location=Sequence derived from alignment at sc0000429:174366..178970+ (Clytia hemisphaerica)
TTCTCTCTTTCTCtagtcaaaaaatatatataaataaaaGGAAAACAGAA
ATGGCAGCGCAACAAACAGCAGACGAAGGGATCACAAAGAAACTTGAAGA
AATCAATTTGGAAGATAAAGAACCATGTGTTTTAGTATTGGGGATGGCTG
GTTCTGGTAAAAGTTCTTTTGTTCAGGTACAAAACATTTCTGACATTACA
TACTTGAAATGTCAACCTTCTTTGGGTTTTTTTAAGGAATAGTTCAATTC
TAACAGTTTTTTCTAAAGAGCAAGAAGAAGTTAGCTGGTTCATAGTTTGT
TAGAtagctttaatttttttctttgggCGCCCCTGGCGCCACCCCATTAG
AGGTGCAGATGGTAGCCGCTATTTGCCCTACTACTAGAATTGATAGgata
tttgaaagtttgatgcTTTTCCCTAACCTGTCCCTAATCCTCCCAACGAA
GTTACCTTAAGCCAGTGTTGAAAGTTCTTCCTTCTCAACGAAGAGGTTTT
Tcagtctcaaaattctgcagaaatttatcaatatttcaagaatatgtgct
aaATTGATGTGTAAAATCCATGTTCTGTTGCTGTCGATcaaccttgcttt
gaccactgataaattaatgttttctttttagagGTTGACTTCTCACTTGC
ACACTAAAAAGCAACCACCATACGTAATCAACCTTGATCCTGCGATCAAC
GAGGTCATATATCCTTGCAATATTGACATCCGAGACACAGTCGACTACAA
AGAGGTCATGAAACAATACAACCTCGGTCCAAACGGTGGCATTATGACGT
CACTGAATCTGTTTTCGACGAAATTCGATCAAGTTTTGAATTACTTGGAA
CAAAAGAAAGATAAATCGAGGTATTTTTGTTTTacatatgtttttttata
agcataacatttataagcatacgaaggCTCTGGCTTTGTAACCTAGACAA
TGAatctatacaccttttcgactgtagctgccaattgccgcgtgggcatt
ttttatccgctttatcccactaaagcCGTCTCAGTcctttttcgcaccta
tagacaatagaaaaatatgtcaaaaaaggattggatcgagtttaggggga
taattcacgcgcctgaccgcgcgattacggtcgaaaaggtatattgttta
agaacaattgaatgctaagcataatgtgaGTCTGATGTAGGTGTGACACT
GAAAATGTATGTACATGTATgctttcttttccaaaaaatcaaaacagtgA
AGTTTCCTTTGTAAATTCTTTTATCTGGTGTGTGCAACCACTGATATTTA
AAATTTGCTTTCTAATGATAGAAAGAGAAAACTCGGTAGACCTCATAGTA
GTTTGCCAATTTAGATAGTTTTTTAGATAGTTTAGATAATTTAGATAGTT
TGcctattttgaaattcttacattcttgttgaaaatactaaatagtgtgc
actctttttgaCTACAATGTGAAAACCATGTCAATATAATTAAACCAATT
TCCTTGAAGCTTGTTTTCACATGGTAGCAAAAAAGAGATGCCCTTATCAT
CGACAGACAGAAGGTTATCtaatattccgatggcgtattggcggccgtcc
acgctaaagctctaaaggagtgaGCCAATTTCCCATTGGagatagactag
agtctacttctgtcTGAtcttgctttttgatgattttgatgaaaaaatcc
ATCAAAGTATATGaatctataaaaaaacatgaaaatacccCCAAAGTTTG
AAAAGAACTGGTCTATTGGAcatggttttctgtttgttttttttctccaa
aaagggtAAAGCCAAGATATGAAGCctgtctatcaaaaagctataagtgg
ccCCCGGGCtacatcggagaggaatgatagtcggcctttgatgtgccgca
tccccagtcgggttcaactacccttgcCCGTAAAGGTAAAAACATtttgg
ttggacccgccaatccccgaaaacgagggctgggttacctaCCAGACCTC
CCACtacaaaatccttgacgcggtcctgcaaaattccgtaatctaaacct
tccagatgttgaaaattttcccgaccttgtACCAGATAAGACAGAAGGTT
GAGCGGGGCTTCAAAACGCaacaaaattcaaagtttttacttcccttttt
tcttcttctgtcTCAGTTTAGTGCTCATCGATACACCAGGACAAATTGAA
GCTTTCACCTGGTCTGCGTCGGGTTCGATCATAACAGAATCGTTAGCGAC
CACCTTCCCGTCTGTTATCGTGTACGTCATGGATACGGTACGCTCCGTCA
GTCCCGTCACGTTCATGTCGAATATGTTATACGCTTGTAGCATCATGTAC
AAAACCAAACTTCCTTTCATCGTCGTACTAAGCAAGGTAAAGACAACTTG
ATTTCAAATAGAATCGACTACCGTAGGTAATTTTTCTCTATCCCGTGGAA
ACAATCTCGGCGTGTGTTTAAAATAATGTGAATTTTTACTTAAACTGTTT
TTAGCGGTTAAGTTTTAAGCTTAGAAGTAAGAGtgaatttccaaaacttt
ttaatttccAAAAACATGTAAAAAGTCGAGGAGTTGGTTAGACTCTTTAA
CTCGAGCCTCTAtgactcgaatgtctccttaactcgaacaacaNtctctt
taactcgaacctctatgactcgaatgtctccttaagtCGAACAACAAGTT
TTCTGTTCCCTTCagttaactcgaacaagttttatcaGTTAACAATGCGT
CATTGTACTGTAACTCGTAATTTCCTTAACTTAGACAAATTTTGTGCCCC
CCGtgtgttcgaattatggagactccactgtttATTATTTCTTTTCGTGC
AACAGATCGATGTTATAGACCACAGTTTCATTAAAGAATGGATGGAGGAT
TTTGAGGTGTTCCAAGAAGCCTTGGACGCTGACACTTCCTATACTTCCAA
CCTTGCACGATCCATGAGCCTCGTTTTGGATGAGTTTTACTCACATCTAA
ACTGTGTTGGTAAGCGACTACCATTCCTCttcgatgggaaattggcccgc
tcctttagaacTTTAGCGTAAGCGGCCGCCAATCCgtcatcggaatatca
gataacattTGGCTAATTTTGCTCGCCTCTCAGCTGTACAGTTGAATCAC
TTTCATGTTCATCATTCTTGATGTTTTTGGTACTAAGCATCTAGACTTAT
CAAACATTAACAGCGCGGCCAGCTTCCAAGGggactggtaatgaatttac
aaggatATGTCGTTGTTTTTGAGAAGGTTTAATACAACGGCTTCagacat
tttgacgtcattccttATTGATAAACTCGAACCCATACTCTTTAAAGGTT
GATAGTTGTATGATAATTACATCTCACAATTTCTCAATTCACCATTTTTT
AGCGTCAGAATTCAACAATAATCAAAATAcaaatataatattttattttg
caGGTGTTTCATCGCTGACAGGGGATGGTATGGATGACTTCATGAAAGCT
TTGGAGAATGCTGTTCAAGAGTTTCATACAGAATACAAACAAAGTGAGTT
GAAGATTTTCCTTGTCACTCTTTCTCGTTTCAGATACAGTTTatcctctc
taattcgacgttccaCTATTTGATAAGTTCCATTAATTGATAATACTGAA
AATCAaccatcaacaagaaactcgCATAAACAATGCTCTActtgatacgc
tcccttatttgataaaaaaaccaTTCCCCCTTGAAATTTGCATTAGAGAG
CccagagcgtcaactgtattttgaACTCTCACCGCTGCCGTTTTACTAGG
TGTATATAATAGGATTTTGTGTTTTAGTCTTTCAGACTCTTTGGAGAGTG
TATTTTGACTTGTGtgagcacttttaccgtcctcgattttgcaggtCAGA
ATTGCGGCttgttccaaatcgcttcagccaCATAAAAACTCGCTATTTTA
TCTAAGCAgcacaaaattcaaaataaaattcaattttctctaTAGATCGT
TCAGCAAAGAAAACGCCTGTAGACGAAAAAGATTCAACAAAAAATGCGGA
ACCAAATTTAATCTTTTCCTCGTCAGACGTGCATAAATTACAGGCTAGAG
ATGAAATCACCATATCAAAACAATCTTCTGACATGAcgtaatgatgacgt
catattatCTCCCCATTTACAAAAATGCTTCAGTAATGGGATGAAAAGTA
TCATTCAAACTATCGATATATCGACCTGATGAAACGATATTGCTAAAAAT
CGACATTGCTGTTAATACAGTATTAATGGGAAAACATTTTCTGTAGAATA
GAACATTTTGTTGAGCTGGAAAGCTCCGAACATTTAAGAAAACTTGAAGA
CATGCGAGCGAACCAGACTACTTTTCATGGACAATTTTATGGAAATTAGC
tttgttaaaatttaaaattatttaaagctCAGTACAGTATGGACATTATC
TACTTGGTGTGGCTGATTGATGGGTCTTTGTCTTGAAAGTTAATTTTACC
GAAGTCAATCATTAGCTTCGTGGGTAATTTCTTTTCTAGGTTGCCACTGA
TagtaaaaatattgatatttttgttgaaaaacgaTATTTTATAGATAAAA
TACAA

Coding sequence (CDS) from alignment at sc0000429:174366..178970+

>TCONS_00022626 ID=TCONS_00022626|Name=TCONS_00022626|organism=Clytia hemisphaerica|type=CDS|length=6138bp|location=Sequence derived from alignment at sc0000429:174366..178970+ (Clytia hemisphaerica)
CTCTCTTTCTCtagtcaaaaaatatatataaataaaaGGAAAACAGAAAT
GGCAGCGCAACAAACAGCAGACGAAGGGATCACAAAGAAACTTGAAGAAA
TCAATTTGGAAGATAAAGAACCATGTGTTTTAGTATTGGGGATGGCTGGT
TCTGGTAAAAGTTCTTTTGTTCAGagGTTGACTTCTCACTTGCACACTAA
AAAGCAACCACCATACGTAATCAACCTTGATCCTGCGATCAACGAGGTCA
TATATCCTTGCAATATTGACATCCGAGACACAGTCGACTACAAAGAGGTC
ATGAAACAATACAACCTCGGTCCAAACGGTGGCATTATGACGTCACTGAA
TCTGTTTTCGACGAAATTCGATCAAGTTTTGAATTACTTGGAACAAAAGA
AAGATAAATCGAGTTTAGTGCTCATCGATACACCAGGACAAATTGAAGCT
TTCACCTGGTCTGCGTCGGGTTCGATCATAACAGAATCGTTAGCGACCAC
CTTCCCGTCTGTTATCGTGTACGTCATGGATACGGTACGCTCCGTCAGTC
CCGTCACGTTCATGTCGAATATGTTATACGCTTGTAGCATCATGTACAAA
ACCAAACTTCCTTTCATCGTCGTACTAAGCAAGATCGATGTTATAGACCA
CAGTTTCATTAAAGAATGGATGGAGGATTTTGAGGTGTTCCAAGAAGCCT
TGGACGCTGACACTTCCTATACTTCCAACCTTGCACGATCCATGAGCCTC
GTTTTGGATGAGTTTTACTCACATCTAAACTGTGTTGGTGTTTCATCGCT
GACAGGGGATGGTATGGATGACTTCATGAAAGCTTTGGAGAATGCTGTTC
AAGAGTTTCATACAGAATACAAACAAAATCGTTCAGCAAAGAAAACGCCT
GTAGACGAAAAAGATTCAACAAAAAATGCGGAACCAAATTTAATCTTTTC
CTCGTCAGACGTGCATAAATTACAGGCTAGAGATGAAATCACCATATCAA
AACAATCTTCTGACATGAcgtaaCTCTCTTTCTCtagtcaaaaaatatat
ataaataaaaGGAAAACAGAAATGGCAGCGCAACAAACAGCAGACGAAGG
GATCACAAAGAAACTTGAAGAAATCAATTTGGAAGATAAAGAACCATGTG
TTTTAGTATTGGGGATGGCTGGTTCTGGTAAAAGTTCTTTTGTTCAGagG
TTGACTTCTCACTTGCACACTAAAAAGCAACCACCATACGTAATCAACCT
TGATCCTGCGATCAACGAGGTCATATATCCTTGCAATATTGACATCCGAG
ACACAGTCGACTACAAAGAGGTCATGAAACAATACAACCTCGGTCCAAAC
GGTGGCATTATGACGTCACTGAATCTGTTTTCGACGAAATTCGATCAAGT
TTTGAATTACTTGGAACAAAAGAAAGATAAATCGAGTTTAGTGCTCATCG
ATACACCAGGACAAATTGAAGCTTTCACCTGGTCTGCGTCGGGTTCGATC
ATAACAGAATCGTTAGCGACCACCTTCCCGTCTGTTATCGTGTACGTCAT
GGATACGGTACGCTCCGTCAGTCCCGTCACGTTCATGTCGAATATGTTAT
ACGCTTGTAGCATCATGTACAAAACCAAACTTCCTTTCATCGTCGTACTA
AGCAAGATCGATGTTATAGACCACAGTTTCATTAAAGAATGGATGGAGGA
TTTTGAGGTGTTCCAAGAAGCCTTGGACGCTGACACTTCCTATACTTCCA
ACCTTGCACGATCCATGAGCCTCGTTTTGGATGAGTTTTACTCACATCTA
AACTGTGTTGGTGTTTCATCGCTGACAGGGGATGGTATGGATGACTTCAT
GAAAGCTTTGGAGAATGCTGTTCAAGAGTTTCATACAGAATACAAACAAA
ATCGTTCAGCAAAGAAAACGCCTGTAGACGAAAAAGATTCAACAAAAAAT
GCGGAACCAAATTTAATCTTTTCCTCGTCAGACGTGCATAAATTACAGGC
TAGAGATGAAATCACCATATCAAAACAATCTTCTGACATGAcgtaaCTCT
CTTTCTCtagtcaaaaaatatatataaataaaaGGAAAACAGAAATGGCA
GCGCAACAAACAGCAGACGAAGGGATCACAAAGAAACTTGAAGAAATCAA
TTTGGAAGATAAAGAACCATGTGTTTTAGTATTGGGGATGGCTGGTTCTG
GTAAAAGTTCTTTTGTTCAGagGTTGACTTCTCACTTGCACACTAAAAAG
CAACCACCATACGTAATCAACCTTGATCCTGCGATCAACGAGGTCATATA
TCCTTGCAATATTGACATCCGAGACACAGTCGACTACAAAGAGGTCATGA
AACAATACAACCTCGGTCCAAACGGTGGCATTATGACGTCACTGAATCTG
TTTTCGACGAAATTCGATCAAGTTTTGAATTACTTGGAACAAAAGAAAGA
TAAATCGAGTTTAGTGCTCATCGATACACCAGGACAAATTGAAGCTTTCA
CCTGGTCTGCGTCGGGTTCGATCATAACAGAATCGTTAGCGACCACCTTC
CCGTCTGTTATCGTGTACGTCATGGATACGGTACGCTCCGTCAGTCCCGT
CACGTTCATGTCGAATATGTTATACGCTTGTAGCATCATGTACAAAACCA
AACTTCCTTTCATCGTCGTACTAAGCAAGATCGATGTTATAGACCACAGT
TTCATTAAAGAATGGATGGAGGATTTTGAGGTGTTCCAAGAAGCCTTGGA
CGCTGACACTTCCTATACTTCCAACCTTGCACGATCCATGAGCCTCGTTT
TGGATGAGTTTTACTCACATCTAAACTGTGTTGGTGTTTCATCGCTGACA
GGGGATGGTATGGATGACTTCATGAAAGCTTTGGAGAATGCTGTTCAAGA
GTTTCATACAGAATACAAACAAAATCGTTCAGCAAAGAAAACGCCTGTAG
ACGAAAAAGATTCAACAAAAAATGCGGAACCAAATTTAATCTTTTCCTCG
TCAGACGTGCATAAATTACAGGCTAGAGATGAAATCACCATATCAAAACA
ATCTTCTGACATGAcgtaaCTCTCTTTCTCtagtcaaaaaatatatataa
ataaaaGGAAAACAGAAATGGCAGCGCAACAAACAGCAGACGAAGGGATC
ACAAAGAAACTTGAAGAAATCAATTTGGAAGATAAAGAACCATGTGTTTT
AGTATTGGGGATGGCTGGTTCTGGTAAAAGTTCTTTTGTTCAGagGTTGA
CTTCTCACTTGCACACTAAAAAGCAACCACCATACGTAATCAACCTTGAT
CCTGCGATCAACGAGGTCATATATCCTTGCAATATTGACATCCGAGACAC
AGTCGACTACAAAGAGGTCATGAAACAATACAACCTCGGTCCAAACGGTG
GCATTATGACGTCACTGAATCTGTTTTCGACGAAATTCGATCAAGTTTTG
AATTACTTGGAACAAAAGAAAGATAAATCGAGTTTAGTGCTCATCGATAC
ACCAGGACAAATTGAAGCTTTCACCTGGTCTGCGTCGGGTTCGATCATAA
CAGAATCGTTAGCGACCACCTTCCCGTCTGTTATCGTGTACGTCATGGAT
ACGGTACGCTCCGTCAGTCCCGTCACGTTCATGTCGAATATGTTATACGC
TTGTAGCATCATGTACAAAACCAAACTTCCTTTCATCGTCGTACTAAGCA
AGATCGATGTTATAGACCACAGTTTCATTAAAGAATGGATGGAGGATTTT
GAGGTGTTCCAAGAAGCCTTGGACGCTGACACTTCCTATACTTCCAACCT
TGCACGATCCATGAGCCTCGTTTTGGATGAGTTTTACTCACATCTAAACT
GTGTTGGTGTTTCATCGCTGACAGGGGATGGTATGGATGACTTCATGAAA
GCTTTGGAGAATGCTGTTCAAGAGTTTCATACAGAATACAAACAAAATCG
TTCAGCAAAGAAAACGCCTGTAGACGAAAAAGATTCAACAAAAAATGCGG
AACCAAATTTAATCTTTTCCTCGTCAGACGTGCATAAATTACAGGCTAGA
GATGAAATCACCATATCAAAACAATCTTCTGACATGAcgtaaCTCTCTTT
CTCtagtcaaaaaatatatataaataaaaGGAAAACAGAAATGGCAGCGC
AACAAACAGCAGACGAAGGGATCACAAAGAAACTTGAAGAAATCAATTTG
GAAGATAAAGAACCATGTGTTTTAGTATTGGGGATGGCTGGTTCTGGTAA
AAGTTCTTTTGTTCAGagGTTGACTTCTCACTTGCACACTAAAAAGCAAC
CACCATACGTAATCAACCTTGATCCTGCGATCAACGAGGTCATATATCCT
TGCAATATTGACATCCGAGACACAGTCGACTACAAAGAGGTCATGAAACA
ATACAACCTCGGTCCAAACGGTGGCATTATGACGTCACTGAATCTGTTTT
CGACGAAATTCGATCAAGTTTTGAATTACTTGGAACAAAAGAAAGATAAA
TCGAGTTTAGTGCTCATCGATACACCAGGACAAATTGAAGCTTTCACCTG
GTCTGCGTCGGGTTCGATCATAACAGAATCGTTAGCGACCACCTTCCCGT
CTGTTATCGTGTACGTCATGGATACGGTACGCTCCGTCAGTCCCGTCACG
TTCATGTCGAATATGTTATACGCTTGTAGCATCATGTACAAAACCAAACT
TCCTTTCATCGTCGTACTAAGCAAGATCGATGTTATAGACCACAGTTTCA
TTAAAGAATGGATGGAGGATTTTGAGGTGTTCCAAGAAGCCTTGGACGCT
GACACTTCCTATACTTCCAACCTTGCACGATCCATGAGCCTCGTTTTGGA
TGAGTTTTACTCACATCTAAACTGTGTTGGTGTTTCATCGCTGACAGGGG
ATGGTATGGATGACTTCATGAAAGCTTTGGAGAATGCTGTTCAAGAGTTT
CATACAGAATACAAACAAAATCGTTCAGCAAAGAAAACGCCTGTAGACGA
AAAAGATTCAACAAAAAATGCGGAACCAAATTTAATCTTTTCCTCGTCAG
ACGTGCATAAATTACAGGCTAGAGATGAAATCACCATATCAAAACAATCT
TCTGACATGAcgtaaCTCTCTTTCTCtagtcaaaaaatatatataaataa
aaGGAAAACAGAAATGGCAGCGCAACAAACAGCAGACGAAGGGATCACAA
AGAAACTTGAAGAAATCAATTTGGAAGATAAAGAACCATGTGTTTTAGTA
TTGGGGATGGCTGGTTCTGGTAAAAGTTCTTTTGTTCAGagGTTGACTTC
TCACTTGCACACTAAAAAGCAACCACCATACGTAATCAACCTTGATCCTG
CGATCAACGAGGTCATATATCCTTGCAATATTGACATCCGAGACACAGTC
GACTACAAAGAGGTCATGAAACAATACAACCTCGGTCCAAACGGTGGCAT
TATGACGTCACTGAATCTGTTTTCGACGAAATTCGATCAAGTTTTGAATT
ACTTGGAACAAAAGAAAGATAAATCGAGTTTAGTGCTCATCGATACACCA
GGACAAATTGAAGCTTTCACCTGGTCTGCGTCGGGTTCGATCATAACAGA
ATCGTTAGCGACCACCTTCCCGTCTGTTATCGTGTACGTCATGGATACGG
TACGCTCCGTCAGTCCCGTCACGTTCATGTCGAATATGTTATACGCTTGT
AGCATCATGTACAAAACCAAACTTCCTTTCATCGTCGTACTAAGCAAGAT
CGATGTTATAGACCACAGTTTCATTAAAGAATGGATGGAGGATTTTGAGG
TGTTCCAAGAAGCCTTGGACGCTGACACTTCCTATACTTCCAACCTTGCA
CGATCCATGAGCCTCGTTTTGGATGAGTTTTACTCACATCTAAACTGTGT
TGGTGTTTCATCGCTGACAGGGGATGGTATGGATGACTTCATGAAAGCTT
TGGAGAATGCTGTTCAAGAGTTTCATACAGAATACAAACAAAATCGTTCA
GCAAAGAAAACGCCTGTAGACGAAAAAGATTCAACAAAAAATGCGGAACC
AAATTTAATCTTTTCCTCGTCAGACGTGCATAAATTACAGGCTAGAGATG
AAATCACCATATCAAAACAATCTTCTGACATGAcgtaa

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_012705	XLOC_012705	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00022626-protein	TCONS_00022626-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000429	supercontig	sc0000429:174366..178970 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
42.9059	42.1103	26.7066	25.8519	15.6987	12.4053	16.4275	18.6486	15.0883	14.4654	14.8829	10.9464	9.97263	9.74408	9.25431	12.8026	13.4413	16.9546	8.16146	7.24545	10.1298	10.7838	33.4959	29.4125	17.8551	19.3879	6.955	6.81416	18.489	20.8433

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR004130	Gpn
IPR027417	P-loop_NTPase

Blast

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BLAST of TCONS_00022626 vs. Swiss-Prot (Human)
Match: GPN1 (GPN-loop GTPase 1 OS=Homo sapiens GN=GPN1 PE=1 SV=1)

HSP 1 Score: 379.407 bits (973), Expect = 2.904e-127
Identity = 169/241 (70.12%), Postives = 208/241 (86.31%), Query Frame = 3

Query:  126 CVLVLGMAGSGKSSFVQRLTSHLHTKKQPPYVINLDPAINEVIYPCNIDIRDTVDYKEVMKQYNLGPNGGIMTSLNLFSTKFDQVLNYLEQKKDKSSLVLIDTPGQIEAFTWSASGSIITESLATTFPSVIVYVMDTVRSVSPVTFMSNMLYACSIMYKTKLPFIVVLSKIDVIDHSFIKEWMEDFEVFQEALDADTSYTSNLARSMSLVLDEFYSHLNCVGVSSLTGDGMDDFMKALENA 848
            C+LVLGMAGSGK++FVQRLT HLH +  PPYVINLDPA++EV +P NIDIRDTV YKEVMKQY LGPNGGI+TSLNLF+T+FDQV+ ++E+ ++ S  VLIDTPGQIE FTWSASG+IITE+LA++FP+V++YVMDT RS +PVTFMSNMLYACSI+YKTKLPFIVV++K D+IDHSF  EWM+DFE FQ+AL+ +T+Y SNL RSMSLVLDEFYS L  VGVS++ G G+D+    + +A
Sbjct:   21 CLLVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANIDIRDTVKYKEVMKQYGLGPNGGIVTSLNLFATRFDQVMKFIEKAQNMSKYVLIDTPGQIEVFTWSASGTIITEALASSFPTVVIYVMDTSRSTNPVTFMSNMLYACSILYKTKLPFIVVMNKTDIIDHSFAVEWMQDFEAFQDALNQETTYVSNLTRSMSLVLDEFYSSLRVVGVSAVLGTGLDELFVQVTSA 261

The following BLAST results are available for this feature:

BLAST of TCONS_00022626 vs. Swiss-Prot (Human)

BLAST of TCONS_00022626 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
GPN1	2.904e-127	70.12	GPN-loop GTPase 1 OS=Homo sapiens GN=GPN1 PE=1 SV=...	[more]

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TCONS_00022626 (transcript) - C. hemisphaerica