TCONS_00024056 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024056
Unique NameTCONS_00024056
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1013

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024056 ID=TCONS_00024056|Name=TCONS_00024056|organism=Clytia hemisphaerica|type=transcript|length=1013bp
CTCCtatctaaaatattttgttattgttcttttctttttccttcaaagcC
GTCTTTTATAGTTctgatttaatttaaaaaatcagtttttaaatatattt
gtCCTCTTGACTCATAGAAAGTTTCTTAGTTGACATCAGATTGCAAGAGG
GTAGCAACAACGAAGAGACCCAACTTAAAATGAAGTCCTtgattgtattt
ttatttttggttatCTCACTCGCAAAAGGTAATGTATTAAAAGGACCATG
CGGCAGTTTGGCAACCAAATGCTACAATGATCTTTTATTCCGGGGTAAAG
ATTTCATTGTCTGTGAAAATTTGTACGATGTGAATATCTGGAGGATGGCA
ATATACCACGAGAACAATGTGTCCAAAGGtgtGCAGATATAGCGATAGAT
TGTGAAAAACAATACCCCTCTTGGATGTGGTGGCTCAAATTTAAGCGAAC
TGCTTGTGGTACCAATGGTTATAAATGCTTGAATGGATGTAAACAGAAAC
ATGACAGCGCTGGACGAAAAAGAACGATGCTTAAAGATTTCGGTCAATTT
GAAGAACAAAAAAGAGATCTTTATGAAGATGCGAGAAGAGACAGAAGAAT
GGAAACCAGACGGCCACAACATGACGACTTCAATGAATTTTATGATTTCG
AATTTGacaaatattaaattatttgaCACCATGACAGTGAAATTTTATCA
TTATAACAACTATATTCTATGCTTGACTATTTTAAACACCTCTGTCTAAT
AGCCCCGGTGTTAGTTTTTCCATCActggggatgaaattttttatAGAAA
CCCCAATGGAGATAGAAGTTCTATTGTTCCCTGATCAAAAATTGTAgcgg
ggatggttttgaagcgcaattttttccattgaatttcaagttgggatgaa
ataaaaatcaatttccaaGTGGGAAGAAATTATAAGATATTTTTCCGGCG
AGGACAAAATGTGgggcaattttccagtggggctggggtccgaGCGGGTC
TGTGAAACAGGTG
Run BLAST on NCBI

transcript from alignment at sc0000471:164837..177339-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024056 ID=TCONS_00024056|Name=TCONS_00024056|organism=Clytia hemisphaerica|type=transcript|length=12503bp|location=Sequence derived from alignment at sc0000471:164837..177339- (Clytia hemisphaerica)
CTCCTATCTAAAATATTTTGTTATTGTTCTTTTCTTTTTCCTTCAAAGCC
GTCTTTTATAGTTCTGATTTAATTTAAAAAATCAGTTTTTAAATATATTT
GTCCTCTTGACTCATAGAAAGTTTCTTAGTTGACATCAGATTGCAAGAGG
GTAGCAACAACGAAGAGACCCAACTTAAAATGAAGTCCTTGATTGTATTT
TTATTTTTGGTTATCTCACTCGCAAAAGGTAAGGGTGTATTTTTTTTAGG
ATGGACCATTTATGTATTTTCTATTCCTAAATAAAAAATCATCCAGTTGA
GAGCATTTGGGATAATTTATTCCTGATCCTCTTTGAGTCTTTTTGAACTG
AGGATTGTAGTATGTTAATTTGATGTTATAAAATTTTAATTTTTCACGGA
ATGTACTTTTGATGGCTAAGCGACAACAAAAACTGTCAAAATTGGTTCAA
TCACACAAAAATAGCAAAAATCTTTGAAATCAAGATATGGCCAAAATCTT
GATCACGCTATCACACCCCTGTGTCAGTGATCCGGTCAGTTCCACCCGGT
GGATAACCCGTTGAAGAGAATTGCCGAAAATTGCCCAATTTTAAGCCATA
GTTGGATATTGACTGAACCCGTAGTTTAGCGAGCTAAACGACTAATTCAG
ATATAGTAGAAATAAAGCAAAAAGTAATGGAGGGAACAAATTTTAGTTTA
TACAAACTAAATCCCGTCACAATAATCGAATTATCATATAACGCCTATTC
TAATGTATTACACGCAATATAAACGAATCCACTGAACCCGGTAAAAATTA
ATCAAACTTTTCCACCCCTGGGCAGAATCTGGAAGTTTATGGTCATACCC
GCCAGTCATTGTTAACATTAGGTAGGTCAACCCGGTAAAAGTTATTGGAA
TTTGTAGTCATATGCGCTTGTCATTAATTACATTATGTAGGCCAACCCGG
TCAAAAATTCCAGATTTAGCGGCGAGCAGCCTAGTAAAGTAAAAGTTTGC
CTTAATTTTTTATTCGCCTTCTCATCGACAAATGTCACTGTCTTTTCCCT
AGTGAAAAATTATCTTTCTTAAAATCAGACCCGTGAAGTTTTTTAATTTT
CATAGTCCCCTCGGTGGTTTTAAAATGCCACCCGGGGTTATCAAATATGG
TCATCCCGCAAACTGAAAATTTTGTTTAAAGTAACCAGCCCTAAAGATAT
ATATATTTTGTCATTTTTCTTTCAGGTAATGTATTAAAAGGACCAGTAAG
TACAATACATTGTTTTCTTCAAATAATTCTTGTTATCATTTACTTCACCA
ATAGAATCTATCGTTTTTTTATCATGTGATTTTTGCACTTGCAACATTAC
TCTTCTGTGCTTAAAATTACTTTATAATTACCCCCCCTATTTTATGACTT
TTTGCCTAAAAGTGTCAAAAACCTTCATTTTCTCAGGGAAATTCACCAAA
ACCACTCCAATATCACGTAATTATGACCCCCCATTTTATGATTTTTCTTC
CAAAATTTCATCTCCCCTGCTTATTCTCCCCCATACAATTAAGCACAGAA
GAGTACCGTACTCAACCTCAAAAAGAATTCAGTCGCAGTCGCACTAAATT
TAGGCAATATTTGAAGATATTATATAGCTATAGTGCCCTATAGTGAGCTG
GTCGTCACCCAGCTGACACACAACGTTGTTTCAACGTTCATCTAATATTA
TATGGACTTTGTGAATATTAGAAAACGTTGAAACGAAGTTGTGTGCCAGC
TGGGCAATCATTTTCTCTGATAGCACGAGGACAGCCAAGTTATACTGCCT
ATTTTGATTGATAAATTCAGTGCGGGGATCTCGATTCAGATTTGTCTTTT
CAGTGGTGAAAAAAAGGAGTTCTTTTGACAAAAGTTTTCATAGCCTCAGT
TTTCTGACAATTTTATAATCCTAGTGCTGTAAAGCATACGCACTTTTTCT
TTTATAAGAATATACTTTATACAAAATTAATAATACTTTATAAAAATATA
TATAAGAATATTTATGATGAAATTGACCCAAAAATTTAAAAAATGCCAGA
AAATCACCATCATGAAATTCGGCAAAAGAATGATCATTTTATAGCTTTAT
TACCTGTAAATTGCCAGTTACCCCCTTCCAATAAGGTTCAACACTTTCAC
AAAAATGCTATTTCACGCTTCAGGGTATGTATCACGCATGTTAAGTTCAG
GTTGGATGCAACTTTTCGACCGTAGCTGCCAATTACCGCACGGGCATTTT
TTTGTTCATTTTACCACCCTAAAACCGTCCCAGTCTTTTTTTCTCACCTA
GACAATAGAAAAAGGTGTTAAAAAAGGATTGGATCGAGTTTAGGGGGAAA
AATGCCTGCGCGGCATGATTTTCCCAAAAAGTTAAGAATATCCATCATGA
AATGGAAAAACACCATCCTAATAATTAAAAGCATGTACCTAATAGCCGTT
CCCCCCCGCTAATTAATTTCCACCCAGGACATTCTTATTCCAACNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCCCCCCCCCCCCCCCGCTTGTTAGGTTTTGAGATTTT
TTCCAACCCCCCACTTATTCCAATCCCCCCGGCTATTAGGTACCCGAGAG
TAGTGCATTTTTTACCCATAGTGCATTTCACCTATACAATGCATTTTTTA
CTCATAGTGCGGCAGTTTGGCAACCAAATGCTACAATGATCTTTTATTCC
GGGGTAAAGATTTCATTGTCTGTGAAAATTTGTACGATGTGAATATCTGG
AGGATGGCAATATACCACGAGAACAATGTGTCCAAAGGGTAATTATCCGA
TCCCAGCTGACACACAACGTTATTTCAACGTTCATCAACGTTATGTGGAC
GTTGTGAACGTTAGATAAACGTTGAAACAACGTTGTGTGCCAGCTGGGGT
ATTTTAGATTGGGGATTCAATAGATTGCTTAAAAAGAATGAAAGTCGGCC
TGAGATATGCTTCATCCCTTCAATACTCTTGTCTCCCGAATAGACGCCCC
CCTGCTAATTGTTAAGAGAAACAAAGCCATCCCCCGCTCTTATTAAGACC
CCCCTAATTAAATTCGACTAATTCAATATTTTATTACAGTGTAGATAGAC
CTTAAACTTGTTAAAGTTTTCATTTTTGTTAGTATTGGTTCTTATTTTAC
GTGTTCATTTCTTTTTTGTTGTTGAAATTGATATCAGTTAAAAAAAATGC
TGTCTTCAAATTCCCCCCCCCCCGCTTATATTCCATCCCCACGCTAATTA
GAATTTAGAAAACTGCGTTCGCAGACTTACTTATCGCTACTTGGGTTTAA
CTTATCGGTATCGGTAACTTTTTATTTTCAGTGTGCAGATATAGCGATAG
ATTGTGAAAAACAATACCCCTCTTGGATGTGGTGGCTCAAATTTAAGCGA
ACTGCTTGTGGTACCAATGGTTATAAATGCTTGAATGGATGTAAACAGGT
GGGTAGCATATTTTTAATTCATTCTTTATATTTTAGCTGTCGAAGCCTCT
TGTTCTTGTACACGTTTTTCATAAGAACTACATAAGAACAGGCTTTGAGG
ACAAAATACCATTAAGAACAAGATGTTAAGAACATTTAAGGCTTTGCAGA
CCCTAAAACACCTAATTTCTTGGAAAAATGAACAAAAAAACTCACAAAAT
GGTGAAAATAAGAACATGTTGAGAACATTTAATCCTGTTCGTACTAGGGG
GGGGGGTGTTTCTGTTTGGTAGTGAAACTATTGTTAAAAGCTCCTGAAAT
AATACAGCTTTTGGCATGAAATTTTCTGTAAATTCATAACTTTTATTTAG
CTTCAAAATAAAAACAAATTTGACACCTAAAAATTTTCACACCTTGAGCA
TGATGACATTTCTGACAGTAAGGTGTTACAAAATTGACACATTTCCTTAC
CAGTTTACCTTTTATGTCAAATATATCGTTTAACCCGTAATTTCTTGAAT
ATTTAGGATAAAATAGCCATTTTAGACGCAGGGAACATTTTCTAAAGCCT
TTGTTTGAATACAACAGCTAGTTATAAGAACAAAGGAAATTTTCGGTTTT
TGCTCACTTTGGGCATGATGAGTGACGTCATCAACAATATTTTGTCAAAA
CTTACCTTATATAAGAAGAATCTTGTGTTTCAAATTTCATCCAAAAGAAC
AAATAGATCATATAAGTAATGGTGTGGTGCAGGAACACCCCCTAGTTTTG
AACCGCCCCTTAAAGCCTAGTATGAATAAGTTTAAAACTCCAAAAGCTAA
GAACATCCGAAAGCTTCAAAATTTTGGATATTCTTATAAAAAATGTGTTT
TTTTATCTGTCGAAGCCTCTTGTGTTCTTACATAGTTTCTTATTATAAAA
AAATGGACCCTGCGTGGGAATCGCTTTTTCAAAAATTTTGCCGACATTTG
CGATAAAAATGTCCTTGAATGGGACTAAAATTCCCAAATTTTCTCAGATT
TTCTACTTTTCCCAAAAATTTTCCAAAATAGACACCCTACGAGGGACTGA
TTTTNTTCAAAAATTTGCGAAAAAAATGTCCTTGAATGGAACTAAAATTC
CCAAATTTTCTCAGATTTTCTACTTTTCCCCAAAATTTTCCAAAATAGGC
ACCATACGAGGGCCTGATTTTTCTATTTTGGTGTTTTTGCGACCCTACCT
GGAACTAGTAAAGGTTAAAAAGGTACCCTGACCAGCGGTGCATCCCCGTA
ACACATTTTACCCTATCCCCCCCCGGTGAAAAACACATTATTTGGAAGTG
AAGATTGAAATAAGCACTGGTGGGTGTTTTCGAATGATGATCGTTTCCCT
TTGAAATTACATCTTCAAAGCAATTCATTTTGTCAATTCTTTAGAAACAT
GACAGCGCTGGACGAAAAAGAACGATGCTTAAAGATTTCGGTCAATTTGA
AGAACAAAAAAGAGGTCTTTATGAAGATGCGAGAAGAGACAGAAGAATGG
AAAACAAACGGCCACAACATGACGACTTCAATGAATTTTATGATTTCGCA
TTTGACAAATATTAAATTATTGTCGAAAATTTGTTGTACATTGTTTCCTT
TTGTTATCGAGCACTATTTTCTTCATCGTTCTCCATGATTTGATTTGATT
TTTTTGTGCACGAAAGTTTTTATTTATATCGGGTACTATATTGAAGACGG
TGAGTTTTGCACAATCTAAGATCAGATTGGGTTCAAAAATCTGGTAATGT
CCCGCACCATGTCAATTATTTGTTCTATCTCGAACCCAAATTAAGAATTC
ATTGTCTCTTGTCACATTGTCACACCACACACCTATGTATCAAACCCCAA
CTTTTAAAAATTATTTCACTGACATCAATTTCCATTTTCCTCGCGGAAAA
CTTGTATGCTTAAAAAACGTTCCATTCTCCCGCCAAAACTGATTCTAAAC
GTTTCCAAAATGGTGGCTGTGAACAAGAGCATCTTATTGAAGAAGAGGCC
GGTAGTAAGCATGTTATTAAAGAAGATTTTTCAATTTGAGACATTTTGAG
AGCGGAAAAGGAAAAAAGTTGGATTGGCCACTTTATAATCATTTAATTGA
CTATCATTTTAATGGTGTTTACTTTATCTTATGTAAAATCTTTTGTAATT
TTTTTCTTGAGACCTTTTCCAGGATAATACATACTTTTTTTTATAAGAAT
GATGTAAATCCATTTCATCATGGATATTCTTAACTTAACCTAAAATATTA
TTTATAGCATCCTTAGGTTAAGATCTAAATCTTAATTTTTTGGCCATTTT
CATCATGGACATTCTTATAAGGTGTATTCTTATATAAAAAACGTTGAATG
TCCGTTTAAGGTCTCTTTTAGCTATTAACCACTTCAGTTGTAAAGAAGCT
CGCATGCACTGCGGCGGTAAGTTTTAAGTGGAAAAATTTCTCAGAAAAAG
GCCAAAAGTTTTCATTTTTGATTCTTAATCTCAATAGATTTAAAAAAATT
CATGAGTATTGAAAAAAGGGATAAACCTCCTTTATCTCGTCATATATCCG
CAGCATATTAAATTATTGAGCAGTCGAGATGGTTTTGTGCTCAAAAAAAT
AAGAGGATACCTTGGTGAAACTTTCAAGTCGAACCAAAAAAATAGGATAC
CTGGAGGGAGCATTACTAAAAAATCATGGTTTTTTCGTGGTTTTGGTCAA
ATCTTTCCCTAAAAAAATAGCTTTTATGGTAGATTTTTTCGGGTATCTTT
AATTTCAGCCTTTCATTTTTTCATCTAAAAAAGTTATATAGACAATTATT
AAAAAAAAGTTATCAGCGATTGAAAAAATAGTGAAAATTCCGTAAAAGAG
CAAAACTCACTTAGTTTAAACAAACTGAGTTGCTAGCTCACCCTTTTTAA
ACAAAAAATCGTCGTTATGCCTCTGCAGTCAAGACACGATTTCAAAGGGT
TTAATGTTTTAAGTCTTCTGAGACAGGTTTTTAGTATCACCATTGTTTAA
ACTAATTAATATCATTGCAATGATATATGGATTGTGTATTTAAATTTGAT
GAATTAATCGGTCTACTGTAAAGTCAGTAATCCACTTAAATTAGCTCTTG
TTTTTCCTTTTGTATAAGCAGGTTATAAAGGCACTTCGAGGGCATGTATG
AGAGAACAAAAGAGCAAGGATAAGCGGATCAGGAAACAAAAAAGGTCGCT
GTGAGAAAGGGATGTTAAGGTCGCCCCAGCTGGCACACAACGTCGTTTCA
ATTTTTTTTTGTTCTAATGCTCACAACGTCCATATAACGTAAGATGAACG
TTGAAACAACGCTGTGTGTCAGCTGGGTGGTTAGCTAATCCTTGATGGTA
AAACCATAGTAATATATAATGGACCATTGTTTTTGTTTCAGCGGGAGCAA
GAAGTCCTTCCACGTTATCTTATATCGTCACCAAATGGGAGATCAGTAAT
GGTAGAAAATTAATCCTTTTTTGCATAATTCTTGAGTCTAATTAGGTTAG
GACAAATAGAATTATTCAATTCTTATGTACTTAGATACTGCACCGAAAGC
CTACAAAACAAATAAATAAAAATATATTCAACAAAACATCCTGTATGTCT
CACAAAGATTTTTAGCTGACAAGAGAGCAACAGCTGGTAAGAGAAGTGAT
GGAATTAAAAATGAAGTCTTTGATTGTACTTTTAAGTTTGGTAATAACAT
ATGCAAAAGGTAAAGAGATATTTAGGTATACTTTTGTCAACAAACACTAG
GTTTTCCTTCCCAGCTGACACACAACGTTGTTTCAACGTTGATCTAACGT
TATATGGACGTTGTGAATATTAGAAAAACGTTGAAACGACGTTTTGTGTC
AGCTTGTGTGGAAAAATACCAATTTTTAGCGCTTTTGACTTTGAGCTTCT
TACAAAGTCTTCCTGGAAAGTAGACAAACTCCTTCAAATATTTTTTCTGC
ATTTGGTCTGTACTAAATTTGGTCTTATTTGTGTGGATATTCATTCGTAG
TCTAAACTCAACTAATCAACTCTTCAGATGACTCCAAAGCTGAAAATTGA
CGAAAAAAAAACAAATTCAAAAATTTTGGTTGCTAGGCAACCTAGGCTGG
TTGCTAGGAGCAAAATATCATTAGCTTTTGAATATGTATTCACAGACTCT
ACATTTTATATGCTTTCAGAAAATATATAGTTTTACAGGTGTATATAAAA
CCATCAAAAAGTCATTCTTCATCGCATTCGCCTAAAAGTCAAGGAACCCT
AAAATACTAAAATAATGTGCGGATGCAAAGGGTTAAAGTATAAACTGTTT
GAATGGCTTTTATCAAGCACCTTTGAAACTCCTTAACTAAAATATATCCA
AAAGATGAGGTAATATTGGCATGTTCCATAATGTGGATGCGTAATTTCTA
TGGACACTTGTCTTTACGCACACCCTGAAAAAGACGTCAAAACAACGTTT
TTCTAACATATTCATAACTGTCATTTAAGTCGAGACAGCGTTCTATGTTT
GCTGGGTACTTATTCAATTTTTAAATCATATCATCTCATTTTTCAGGTAT
TGCAGCTCAAGGACCTGTGAGTAAAATGCAATTATTTCATTAAACATTAA
AAAGTTTATTTTCAACCCCTTGCATTTTATTTTAAAGCTGAGAAATTAAA
ATTTCAAGTAATGGTAACAATTCTTCAGCCCCTACTCTCGGATACCTAAT
AGCCGCCCCCCCGCTAATTTGTAATTAATTTTTCAAAAATTTTCTACCCA
GGACATTTTCATTTTAACCCCTCCGCTTATTCTAACCATCCCGGCTATTA
GGTACGCGCTCGGGTGAAACAAGGCATGTCCCAAATATATTTTGCGTGAC
GCACACCGCTTCCCATTATACATTAACTTTCATATTTAGCTCATATCGTC
TCAACGAGAGGATTTCGAAAAGTGCTGGGTCAAAAATTTACATCAAGCCA
ATCTCAAGATATCGGTCAAAAACTGATTTTGACGTTATCAAATACATGGA
AAAAAACACGTCAAAAAGACAATTTAAATGACGTCATTATTGAAAAAAGG
CGATAATTCCGATTAACTTACTACAATCAAAGTAGAGTTTTGACTGGAGA
TGTAAATTAACGATTCTAAAATATTTCATGAAAAAAAATTGAAAATTCAT
GATGACCTCAGCATTTTTTGACGTATTTTTATTTTTCCCGACAACAAATG
ACGTCATTCAAATTTTCTGAAAATTTTTGAACAAATATTTCAGAATCATT
AATTTACAACTCCGGTCAAAATTTGGTGTTGATTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNTCATTGAACACAAACTTCCGTTATCTTAAAAAGACATATCATCG
AGGCTTACAGACACAAAATTTTGACTAATGTAGAAAGTTTAGAAGTATAA
TTTTTAATATTGTATTCGGCATTTATTTTAAGCCAAAACGATGTCAGGAA
TTAACCCACATTGTAGTATTNGATATGATTCTTTTGAGCTATATATGAAC
GTTAAGGAATAATTGGAAGCGGTGCGCGTCACGCAAAATATATTTGGGAC
ATGCCTTGTTTCACCCGAGCGAAAGTAAATATTGACGAATGTGCACGAAA
TCTATTATTCTGTCACTTAGGGAAATAATTGTGAATATTTCCCATAGTGT
GGTGGCTTGGGAAGCAAATGCAAGACAGATCTGTTTTCGGGTGCAGATTT
CAATGTTTGTGAAAAATTTGTGCGGTGCGAATATCTGGAGGATGGCAATA
AACCACGAGAACAATGTGTCCAAAGGGTGAGATGATAAATTTGTAGCCTA
TTTTGTTAACTACCAAGTTCATTGTCTATAGTCAGGGTTATCCCTTTGTA
AGCGCTGTTTTTTTTTTGAAAAAGTTAAAATTGTTTGTTTTTCCTCTAGT
ATTTGGATTGGAATTTTTTTGGTTTTACTAAATTTAATTATAAACTGTAC
TGAGAATTTTAAAACTGTAATGCACTTAAGAGGTGCCCTATACAAATCTT
TTTATAAGAACAAACAGTATAAGAACATAAGGCTTCGATGACCAAAATAC
TAAGAACATACTTAAAAACATTTTAAGGCTTCGTGGTCTCCAAAAGGCCC
TATTCCTTAGGAAAATACACAAAAATACTCAAAAAATGGCGAAAATAAGA
ACAAGTTAAGAACATTTTTAGGCTTAAAACTCAAAAAGTTAAGAACATTC
TAAGATCCAAAAATTCTTATAAAAATAAACTGTATATTAGAATCTAGTTT
ATACGTAAGAAATCTCAGCGCTTTTGAAATTTTAGAGAAGACGTATATAT
TCATCAACTAAATGTCTTTCTTGTTTTCCAGTGTTCGTATACGGCGATGG
GATGTGAGAAACAATATCCCGTTTCGATGTGGTGGTTTAGACCACTACGA
ATTGCTTGTGGACAGACCGCCTACGATTGCTTGAACAGGTGTAGACTGGT
GGGTGTTGTGGCGTCAAAAATTTGGCGCCCTTTAAAAGATATTCTGTTTT
TCTAGTGAGGATTGGAGTGGAGTGTTTTCTGCACCCCTCTCACCCCAATA
ACAGAGTTATGCAAGAAAAATTATTTATTCCCAATACAATGCAATGCAAA
AGAGACTTATGAAAGTCAGCCTTTTTTGTAATTAATAAGGACTTTTTTAC
GTTTTAATGATCGCTGCCTAAGCTGGGTTNCTTAGGAAAATACACAAAAA
TACTCAAAAAATGGCGAAAATAAGAACAAGTTAAGAACATTTTTAGGCTT
AAAACTCAAAAAGTTAAGAACATTCAAAGATCCAAAAATATATATTAAAA
TCTAGTTTATACGTAAGAAATCTCAGCGTTTTTGAGATTTTAGAGAAGAC
GTATATATCTTACTATACTAAACGAGTTTATGAAAAATGTCTGTAACGCT
AGCCCAGTAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTC
TACACTGCTATTTGTAAACGAAAAAAGTTCTGACGTCAATTTCATGAAAA
AGTACTGCGACGTCACAAAGTTTCAAATAAAAAGGTGTGGCATTTTTATT
GCACGATTTCGAATTATTTTATATCAAAACACGCAACAAAATCCAACATT
ATTGTTTGATGATTAAACTTCGTCTAACATTATTTAAAAAGGTTTCAATG
TTGGTTGCATTGCATATGCACCGGTCTTAAGCTGTCTGCATGTGAAGCCA
ACAAACGGGAAAACCTTCAGTGCTCAATCGCAAAGCGCGATCCTCTCCTT
CACAACTAAGACTTTTTCTTTCCTAGAAGCAANCAATATTGTGTGCCAGT
TGGGTATCCAGGAAAACATTCAACATTCTAGATTATTCTATTCTAGATTA
TTAAAAGAAATTTTGTATTTCATTTTATTTATTCAGGTTCATGACAGTGT
CGGACGAAAAAGAACCATGTTTAAAGATTTCGATAAATTTGAAGAACAAA
AAAGAGATCTTTATGAAGATGCGAGAAGAGACAGAAGAATGGAAACCAGA
CGGCCACAACATGACGACTTCAATGAATTTTATGATTTCGAATTTGACAA
ATATTAAATTATTTGACACCATGACAGTGAAATTTTATCATTATAACAAC
TATATTCTATGCTTGACTATTTTAAACACCTCTGTCTAATAGCCCCGGTG
TTAGTTTTTCCATCACTGGGGATGAAATTTTTTATAGAAACCCCAATGGA
GATAGAAGTTCTATTGTTCCCTGATCAAAAATTGTAGCGGGGATGGTTTT
GAAGCGCAATTTTTTCCATTGAATTTCAAGTTGGGATGAAATAAAAATCA
ATTTCCAAGTGGGAAGAAATTATAAGATATTTTTCCGGCGAGGACAAAAT
GTGGGGCAATTTTCCAGTGGGGCTGGGGTCCGAGCGGGTCTGTGAAACAG
GTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013510XLOC_013510Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024056-exon-sc0000471-1575043694:177112..177339TCONS_00024056-exon-sc0000471-1575043694:177112..177339Clytia hemisphaericaexon
TCONS_00024056-exon-sc0000471-1575043694:176095..176114TCONS_00024056-exon-sc0000471-1575043694:176095..176114Clytia hemisphaericaexon
TCONS_00024056-exon-sc0000471-1575043694:174202..174332TCONS_00024056-exon-sc0000471-1575043694:174202..174332Clytia hemisphaericaexon
TCONS_00024056-exon-sc0000471-1575043694:173542..173658TCONS_00024056-exon-sc0000471-1575043694:173542..173658Clytia hemisphaericaexon
TCONS_00024056-exon-sc0000471-1575043694:172076..172145TCONS_00024056-exon-sc0000471-1575043694:172076..172145Clytia hemisphaericaexon
TCONS_00024056-exon-sc0000471-1575043694:164837..165283TCONS_00024056-exon-sc0000471-1575043694:164837..165283Clytia hemisphaericaexon
TCONS_00024056-exon-sc0000471-1510915933:177112..177339TCONS_00024056-exon-sc0000471-1510915933:177112..177339Clytia hemisphaericaexon
TCONS_00024056-exon-sc0000471-1510915933:176095..176114TCONS_00024056-exon-sc0000471-1510915933:176095..176114Clytia hemisphaericaexon
TCONS_00024056-exon-sc0000471-1510915933:174202..174332TCONS_00024056-exon-sc0000471-1510915933:174202..174332Clytia hemisphaericaexon
TCONS_00024056-exon-sc0000471-1510915933:173542..173658TCONS_00024056-exon-sc0000471-1510915933:173542..173658Clytia hemisphaericaexon
TCONS_00024056-exon-sc0000471-1510915933:172076..172145TCONS_00024056-exon-sc0000471-1510915933:172076..172145Clytia hemisphaericaexon
TCONS_00024056-exon-sc0000471-1510915933:164837..165283TCONS_00024056-exon-sc0000471-1510915933:164837..165283Clytia hemisphaericaexon
TCONS_00024056-exon-sc0000471-1491911889:177112..177339TCONS_00024056-exon-sc0000471-1491911889:177112..177339Clytia hemisphaericaexon
TCONS_00024056-exon-sc0000471-1491911889:176095..176114TCONS_00024056-exon-sc0000471-1491911889:176095..176114Clytia hemisphaericaexon
TCONS_00024056-exon-sc0000471-1491911889:174202..174332TCONS_00024056-exon-sc0000471-1491911889:174202..174332Clytia hemisphaericaexon
TCONS_00024056-exon-sc0000471-1491911889:173542..173658TCONS_00024056-exon-sc0000471-1491911889:173542..173658Clytia hemisphaericaexon
TCONS_00024056-exon-sc0000471-1491911889:172076..172145TCONS_00024056-exon-sc0000471-1491911889:172076..172145Clytia hemisphaericaexon
TCONS_00024056-exon-sc0000471-1491911889:164837..165283TCONS_00024056-exon-sc0000471-1491911889:164837..165283Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000471supercontigsc0000471:164837..177339 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0338723	0.0371546	0.0549074	0	0	0.0373368	0	0	0.0218941	0	0	0	1.06524	0.922185	0	0	2.59522	5.49619	6.09171	5.23696	23.3636	22.2962	26.9114	35.6319	4.98876	3.53045	5.97501	0.338474	0.0878335	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00024056 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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