TCONS_00024560 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024560
Unique NameTCONS_00024560
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1799

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024560 ID=TCONS_00024560|Name=TCONS_00024560|organism=Clytia hemisphaerica|type=transcript|length=1799bp
CGCTCAGAACACCACACACGTTCATTTCAATCTAGAAACTGATTCACCTT
CATCCTTAGACACTTTGGTCTATATATCCATCAACATAAATCTCTGCTAA
CATCATATAAAATGGTTGAAGAAAAACCAACAGCGTCAACTGCTAAAGTT
CCAAGTGAAAAAGATTTGGAGGAAGTTGCTGAGCTTATGTCTGTTGGGAA
GAGACACTTGATATGCAATGAACCTGAGAAAGCATTGGACTACTTTGTTG
AACTATGTGAAAGGCTTGCTGAATTTTATGGACAGACAGCAGATGAATGT
GCTGATGCTTACTTACACTACGGAAAAACTTTACTTGGATTGGCTAGAca
agagattggagtgttttgGAATGCAGTTAAAGAAGCCCCAGTATTACAAG
AAGAGGAAGAAACAGAGGAAGAGGGAGAAGATCAAGGTGAAGTTATGGAG
ACAGAAACAAAAAGTGGAGATAAAGACGATGAAAAGACAGAACAAAAACA
AGATACCGAAGATGAAGAATCGAAAGAGACAGCAGAGAAGAAGGAAGGTG
AAGAACAAGACGATGATGATTGTGGGGATCAAGATGTATCACACATGGAA
CTTGCATGGGAAATGTTGGAGTTAACTTGCAGTATTTGTAGCAGAATGGT
TACTGAAAAAAGGGACATAGAAAAAGCAGAAGAGATGCTAGCAGAAGCAA
AGTATGGGCTTGCACAAATCAGCATGGAACAAGAACAATACGAGAGAGCA
ATTGAAGATTTCAATTCCTGCCTAGAACATTACACAAAGACATTAGATGA
TAAATTGGATAGACGGATTGCTGAAATCCACTACAATGTCGGCCTTGCAT
TTTCATTTGACAAGAAGTTCGAAGAAGCAGTCACTTCTTTCAAAGAGGCT
AAATCACTGTTAGAATCAAGACTCGACGTGTTGAAAGGGAAGATTGAAAA
ACACGAACGGGAAAGTGGTAAAGGGAAAGCTCCTACAGAACTCTTGGATT
GGAACAAAGAAATGAAGGAGTTGGAGGACTTGGTCCTTCTTGACATGAAT
GCAAAgATCGAGGATGCAGAAGAATCGAAAAAGCAAGCAGATGCAGAGCT
CGTAGCTATGAAAGAGAAAACTAAAGACCTCTTTGGTGCCTTGTCATCTG
CCACAGGATTCGAAACAGGTTTCGGTTTTGACGAATCAACTCCGACAACG
GAAGTCAAAGTACACGATGCTACCACGAACGTTCGCAAAGGCTCGGTAAA
GCGACCATCAGACGATGAAGGCGTGAGCGACGCAAAGAAGGCCAAAACAG
TCGATCAAAACTCAAACAATGAAACGGCAACAGCCGGAGAGAAGACAAAC
GGTGTCGCCCACAACGACGAAAAACCAACTTCTGTAGGAGCTTAATTTAT
tgtctattttttttctttttacgtATTTTGTacccttttcatttcattac
cTTTTATAATTATCTTTCGTTAcggtttttatcttaaaatctaaaatgta
aaaaaaaacacaagaatTTGTAAATATTAAAGTTAAATGGAACAAGATGA
TGGCTTTTGATTTCCCTATATTTTGAAACGACCTATCTTTGAGGTTCTTC
AACTTTGCTTGTCCGGATGAGTTTTAATTCAGTGTAGTAAATAATTTCGA
ACAATCTACTGATATCGTAATtgccaatagaccttttcaaaaattacgtc
gcgaacatcgcttgcctcgtattcagacaattaccatggtgattatgttt
CTTGAgatattaaatgatttttttatgaataggaagtagttttaataaa
Run BLAST on NCBI

transcript from alignment at sc0000502:211475..223159-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024560 ID=TCONS_00024560|Name=TCONS_00024560|organism=Clytia hemisphaerica|type=transcript|length=11685bp|location=Sequence derived from alignment at sc0000502:211475..223159- (Clytia hemisphaerica)
CGCTCAGAACACCACACACGTTCATTTCAATCTAGAAACTGATTCACCTT
CATCCTTAGACACTTTGGTCTATATATCCATCAACATAAATCTCTGCTAA
CATCATATAAAATGGTTGAAGAAAAACCAACAGCGTCAACTGCTAAAGTT
CCAAGGTAAGTTCATCCAATCCAAGTAAGTAGATTCGATCTTTGTTTTTA
CCTCTACATTCTCCCACTGTCCCACCCCACACCTTTCTTCACTTCCTTCC
CTTCCAAGAGCAGGTGGGGGTCAATACTTAAAATCTAGGACATCTTGGTG
ATATGGTGGTATACCCAAAAAATGTAAAATTCCTTCAAGTACCATTGGGT
ACTAAAATACGATGCTAGTCAAAAATAGTGTGACATTTTTATTTCTCCAA
AATAACACCAAATTTAGAATTTTGTCAATAACTGTCTCAAATCTTGATAT
CCTGAAATAAGATTTCAGGAGGTGATAGAGCTAATGAAGACAAAGCCATG
GATATAGGTATCACGTGCGTTTGGTTTGGGAACGCGAAACACGAACGCAA
ACTACCCATGTCTAAACTTTTCAATATATCTCCAGAACTAACAGATTTTT
TGAAATTCTGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNTACAATATGTTTTAAGTAAGGCAAAAAAGCTAAGCAAAGATAGATT
TTTAAACAAAACCCATTAAAATGAGCTGTTTTTGAGGTTGACAAGCCGCA
AAAGCCTGTATTGAGTCAAAAGTGGGGAGAAAAGGCTTTTTGGGCTGTCA
ACCTCAAAAAACGCTTCAATAATCATATAAATCCAATTCCATAGTCTTTC
TGTCTTAAAAACAAATATAATTGAGGTTTACAAATGATTTTAAAAGAGCT
TCTGGCTGTTTCCATCATAAGGCACTTTACCTTGCATTGAAATAAACGTT
GTTGTCAACCTCAAAACTTGCTCAAATAACAGATATTTCCTTGGAAAAAG
ATTTTTAGACGGTCAATAATGATATTTTATAAGCCAAAGTCATCATATTG
ATCTACATTTGTCAAAATTATGCACAAAACTAATGTTAACCTCATTTTTG
GAGCCATTTAATAAAATGTCAACCTCAAATAACACCCTTCATATCAATTT
TCAACCCTTTGAGATAATTTCAGAGCTACTTACTTGGAATACTTGGAAGT
GCTTTCGATGGTCTTCCATCTAGGTGAACAATCCAATGTCCGCCTGCCGA
TTATTGATTTGATGTTTGATTGAGTTGGATGCANNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNTTTAGGGAGGGAGTTGAACAAGATTGGCC
CACGGGTTGATAAGAAATTATGTCGGATTGACTGTAGGGCAACTGATGTT
CCTGTGATTCGGGCTTTAACAAAGCACAATCTTCCAAGTCTGGGTGGGAA
AACAGGTCGTAACCCGTCTGACTGGTTGATATTAGGCACAAGGTTTTCAA
GAATCTTCCACGTGTAGATCATGTATCTTTCACGTCTTCTTTCTAGCGAA
TAAAGCTTGAATGCCTTCAATCTTGACCAGTATGATTTTTCGGGGTGAAT
GATTTTTCGAATGAAGCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNAGGTACAATGAGAGATTTCTTTAGAGTTT
CAGGGGTCTTTCCAGTATCGAGGCATTTTCTCCAAAGGATGAGAAGAGGT
CTTGATAGTGATTTTTTGCAGCGTTTTAGAGCTATAACATATCCAAAATG
TAATTCAAAAGTCAACTTACAGGGTGTCAAAGAACCCTAACAGTGTCAAC
CTCAGGTCATGTTAACCTCAACTTTGGCTCCCACTTCAAAAAAACGTATC
TCGAGTTAGGGTAAACCTCATAAGAAGATACTTATATGCCTAGAAAGCAA
AATTATTCAGCCTAACCATACTAAAGTTTCAGTTGTCAACCTCAAACTTA
GCAAATTTTATGGGGCTAAATGTAAACCTCAACAAAAATGTCACAAATAC
CCCCTCTATTTTTGACCAGCATCATACCCAAAAAAGATGGTACCCGCCAT
ATACTCAAATTTGAGAATTCTTAAGTAAATTGGTACTAAAATTATAGTAA
TTTCGTTGTCATTGATATTGTGGCACGTTCTAGGCGTGTTTGGGATGGGA
AATAAGGGGCTTCACTTTTTTTTGCCTGGGGAACAACTTTCTTATTGGGA
AAGGTCAGAAATTCTACTCTAGCCCTTTGGACTTTAAAACTCAATGCCAA
TGGTATACCAGTTCTGTTCAAGGCAAAATTTGGAATGCAAATCAGGATAT
TACTTTCAAATACTTTAATCGTAGAAATTTTAGCGAGACTAATTTTAGCG
TTTTAGCGAGTTTTCCCTATTTTCGCCAAAATAAATCTCGCCAAAACACG
CCGATTCGACAGATCGCTATAATTTATCCACGCGAAAATTTTTGAAATCG
TGATTCGCTGAAATAAATCCAAAAAATCAAGATTTTCCTGACTCGCTAAT
ATACGCTATATATAAAATTAGTCTCGCTAAAATTTCTATGATTAAAGTAA
GGATTACACTTTCATCCTGTATGCTTTCAACGTCAGATGTGGTTTTGTTG
GGTCGTATTATTCGGCAACGCGGCCATGTGGAAAAATTTTAACAGAGGGG
CTACTGACTTTATTCTGGATGAACAAATATATATAGTTTTCGAAATGGCA
ATCGCATGCCGAGAGATATGTTGCAAGTGAGGATATGGGGATTTAGGGTC
ATTGAACTAATTTGAAACTTTTACAGTCAGGGAAATCCCTCAATTGCGGT
AGTAATTTTTTACTGCAATTGCAGTATAAACGTCACTTTTACATTTTTCA
TATACCCTAATTGCAGTATATTCAAGAAACAGAATTCAAGATTCAAGTAG
AAAACAGGCAATCTTTGTACATAATTCATCATATCTTTTTAACGAATACA
GAAAATACTTTTTCCATAGATCAGATTCTTTAAATAAAGAGAAGCTTACT
TACTCGAACCAGTCGAACCAAATCGAACACAATCGACCGATTGAAATTCG
ATTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATATTCGATTGGTTCGATT
GTTGTTCGACTGGTTCGATCGTCGATTCCGTTCGATTGAGATCGTTTGGC
TTTATTCTTGCAGCTTCCCAACATCCAACCTCACAAGCATCACAAGCTGA
ATGAAATTACTTTCGATTTCCCGTAGAAATTATGCAATGAACAATCCGGG
GGTCAATGAATCGACAATCGAACGCAATCGAACGCAGTCCAACATCAATC
AAACGCAATCAAATATCAATCGAATCTGAAAATTGCGGTAATATTTGATT
GAGATTCGATTGCGTTCGACAATCAAATTTCAATCGGTCGATTGTGTTCG
ATTTGGTTCGACTGGTTCGATCGTCGATTCCGTTCGATTGAGATCGTCTG
GATATAGCGGTTATAAGCCTTTGTAGGCTAGCCACCAATGAAAACTGCCG
CAATTGCAGTATACTGCAATTGAGGGATTTCCCTGACTGTTTTTACTAAC
CAAACATCGAACTCCTATTGCTGCAAAAATTGTGAATGTTCAAGCAGGTT
CAATTATTTTACTCTGAGAACTTTAATCATTCTACAGAGTTAGGTTAGTT
CCATTGTTCGATTGATTTGACAAGTTCGATTAATCAGGTCTGGTTTTATG
AATCTTTTTTAGAGTATTTCATGATTTTTTTTGCAAATTTTCAAAATTTT
TAAGTTTTCTTATTTAAAAAAATAATTCCCAAGTTCCATTATTTTTGCAA
TCAGTCAAATGTATGTCTTTAATGTTTGATCAATTCATAAAGCTGCATAA
AGCAGCAATGTTTAAAAGTATCAATTTTGAGAAAATGAATATGATGTTGG
AAAAATCAGCAGTCTTGAGAAAAATGGTCTGGAGAAGATAACATTTGTCC
AGAAAAGAAAAAAATGGGGTGTCTAAATGTCCCTAAAAATTTTAGTACAT
GGGTATTAAACAACTTCTCAAAATTGGGGTGTTGGTATGAAAGAAATTCT
CGAAAACCTTTTTATTACTCGTATGTCCGAGATTTACGTGCAGACGACCC
CCTGTTTGATGGGTTAATCTAAAGAATCCTACATTTACTAAAAATGGACA
AAAAGAACGACAAATTTCATAAGAAACAATATGTTTGGCCCTCCGCAATG
CTGACCCGGCACAGAGCATTTTTTGCTTGTAAAGTCTTTTGAAAGAGAAC
AAAAAGAGAATTGTTGTTCGTTTGTTATATGCATCAAGAAAAAGTTTCTT
AATAAACATGGAGTTTCATGTATGAAATAAAGGTCCAAACAAAACTATTT
GAATTCAAAATTTTCTTTAACAGGGGGGGGGGGGTTAATGAAAAAGTATG
TAATTTCCTGGAGTATAGTCATTTGTGTAAGCTTCCGTACAGGGGATGGG
TAAAATGTCATGACAACTTCCATGGCTTTCTTAGGTATTTAAACCTAAAC
CTAATCCTGATACCATGATATTTCTTTTAGTGAAAAAGATTTGGAGGAAG
TTGCTGAGCTTATGTCTGTTGGGAAGAGACACTTGATATGCAATGAACCT
GAGAAAGCATTGGACTACTTTGTTGAACTATGTGAAAGGCTGTAAGTCAA
ATGTTTTTTGGTCATTTGAACAGTTAACTTGTAAACTTAAAAGAAATCAA
AAGTTGTTAAAGGCTGGCAAAGTTAACTCAATTTACAAACCTGAAGATGG
TCCAAAATTATAATAATTAACCACATTTAAAATCGGTTTGTTTGAAATTC
GCTAACCTCATTCACCTCTTGAACTTCTTTAAAATCAACTTAGAATTAGA
ATTGAATCATTTTTATGTTTAAGTGCTGAATTTTATGGACAGACAGCAGA
TGAATGTGCTGATGCTTACTTACACTACGGAAAAACTTTACTTGGATTGG
CTAGACAAGAGATTGGAGTGTTTTGGAATGCAGTTAAAGAAGGTACCTAA
TTCCATTAATTTTTCTGCGCATTTTATTTTCGTGCAGAATATGTGCATGA
AAACATAAGGAGCGCGAAATAGGCCTATTTTCGTGCACTTGGCCTTGCGA
AAATTAAAGGGTGCGTGAATAAATAACCGTTCTGAACATGTAGAAATCTC
ATCTTAGGGCTCTTTTAATAAAATGAGACCTAGATTCATGGTAAATATGT
CTAATGAAAATGTCCGACCCAAATCGATTCTAGTCAGACGNTTACTTTAA
AAGCCTTAGGACATGTCCGACCTAAATCAATTTTTGATCGGACAATGTGT
CCGACCACCTAAATATCGTTATTTCGAGCCCTGGAAATACACACTGAATA
GCAACTTTAAATCGTCAAAAACACTCAGAAAATATTCCAAAAATTGCATG
ATGTGCGAAAATTAAAGGATGCACAAATATTCTATTTTACGAGTTGCATG
AAAATTAGTGGCACGAAAATAAAAAGCGTGCAAAAATTAGACGCGCAAAA
ATGAAAGGCACGTGAAAATTAATGGATTAAAGTAACGCCTACTTCAAATG
AATGCCTTAGCTTATTATGAGAGATTATGTTTATTTTAAATTTTTTAAAG
CTTTAAAAAGAGTTTGAACAACCCTTTCGCTAAACTCAGGCTATTGATGC
AATATGCCAAGTTCAAAAGTCACACAGATTTCATATTAATTTTTAAGCCT
TTTTGCTAATTCCTGGTTTTACCAAAGTCCACAGCACATTAAACAGTGAG
ACTTTTTTTAGCCCCAGTATTACAAGAAGAGGAAGAAACAGAGGAAGAGG
GAGAAGATCAAGGTAAATTACTTTGTTATTGAAAAACATACTTAGCTCTG
TCCATAGTGCTCTGTGAGAGGGAATTAAAAAGATTAGTTTCACAGTTGTA
TGAAGAATTTTCTCAATAGAAATTTCATCTGTTTAGGTGAAGTTATGGAG
ACAGAAACAAAAAGTGGAGATAAAGACGATGAAAAGACAGAACAAAAACA
AGATACCGAAGATGAAGGTGAGACTTCTTTTTTGCATGATAATTCAGTAT
AATATCAGTTCTTTGACTAAATTGCTTATTTGCTTGTCCCTGATAATCAA
TTTATCAAAGAATGATCTTCCATACTGAATGTTCCTCTTTTCTTTCCTTT
CAAAGAGGAAGCACTAAAGCCTTCTGAAATAAAAGAGCAAGTATCACATG
CAATGAGAGAGGGCAATCTGTATAATGATGCAACCACGGAAGAAGAAACT
GAACCAGAAGAGGAAGAATCGAAAGAAAATGGAGAATCCACTACAGGTGA
AGATAACATTTCATGTTAATCTTTCATCTTTTTCCTGGAAGTCCAAGGTG
CTCAAAACATATAATTCTGCTTTGGATAGTTAAATTCCAAAATTTCTCCT
TTTGTAGAATCGAAAGAGACAGCAGAGAAGAAGGAAGGTGAAGAACAAGA
CGATGATGATTGTGGGGATCAAGATGTATCACACATGGAACTTGCATGGG
AAATGTTGGAGTTAACTTGCAGTATTTGTAGCAGGTATATTAAGGGAAAG
TGAAATGTATAGTTAATTTATAATTATGGAATTTGACGAACGACAAATGA
ACATCGAGACAGATTGAGAGTACTCTTGTTTAGAAGAAATTAATTTTTTT
ATTCACATAGACATTTTCAAAAAATCTTGTTTACAGAATGGTTACTGAAA
AAAGGGACATAGAAAAAGCAGAAGAGATGCTAGCAGAAGCAAAGTATGGG
CTTGCACAAATCAGCATGGAACAAGGTTAGTTTGTTTCACTACTGACCAT
TCTTTACAGCGTTGTCTGAGATACTAAAAGTATTGATTACTTAAAACACA
TGTGACTTCCTTCTTGCATTTTCCCAGATTAATCAACCCAACTTTAAATC
TGTCCATATCCTGAAATTCTACATCAATTTTGTTCGATCAAAACATGAAA
TCTTATAGATTCATAAAATTAATGTGGGTTATTTGACACAAATTCTGTTC
TCAATCTATCGACCTCTTTTCCTTTGATTCCCTCTAGAACAATACGAGAG
AGCAATTGAAGATTTCAATTCCTGCCTAGAACATTACACAAAGACATTAG
ATGATAAATTGGATAGACGGATTGCTGAAATCCACTACAATGTCGGCCTT
GCATTTTCATTTGACAAGAAGTTCGAAGAAGCAGTCACTTCTTTCAAAGA
GGCTAAATCACTGTTAGAATCAAGACTCGACGTGTTGAAAGGGAAGATTG
AAAAACACGAACGGGAAAGTGGTAAAGGGAAAGCTCCTACAGAACTCTTG
GATTGGAACAAAGAAATGAAGGAGTTGGAGGACTTGGTCCTTCTTGACAT
GAATGCAAAGGTATTTTCATCAATTCTCTTAAAACGTTTTGGCGAAAACA
TCCGGCTGAAAATTTCTAACCGAGATTTACAGGCGAGGAATACCAGTCTC
GTTGTTTCTTTCCGATCAGTTTTATATTTTAAAATGCTGAAACTGAGGTA
TTGAAGTTTGCGTTTAGGAAATAAGATGTTTACATCATACCGAAAACTCT
CTTTCAGATCGAGGATGCAGAAGAATCGAAAAAGCAAGCAGATGCAGAGC
TCGTAGCTATGAAAGAGAAAACTAAAGACCTCTTTGGTGCCTTGTCATCT
GCCACAGGATTCGAAACAGGTTTCGGTTTTGACGAATCAACTCCGACAAC
GGAAGTCAAAGTACACGATGCTACCACGAACGTTCGCAAAGGCTCGGTAA
AGGTAATTCCGTTATCTCCTTTATGATAGAATGAACGTAAAAACCGTGAA
TACTCTGTTATCGTCGAAAGACGTCGTCCAGTCTTCAGGTGTAAATAAGT
CGGAATGGGTGGGTGGCGTTGAAGCAAAATAAAACAGTCCCAGTGGACAG
CTCCAACCTTATTTGAACAAATTGACTCAGTTCCCCTATATTTGCGATTA
ACTTCACGATTAGCAGTCTGTTCTCTAGAGGGGTTTCACTTTATGCTATT
TAGTTGATGTTAAATTGACATTTGTTCTGTTCGACAGCGACCATCAGACG
ATGAAGGCGTGAGCGACGCAAAGAAGGCCAAAACAGTCGATCAAAACTCA
AACAATGAAACGGCAACAGCCGGAGAGAAGACAAACGGTGTCGCCCACAA
CGACGAAAAACCAACTTCTGTAGGAGCTTAATTTATTGTCTATTTTTTTT
CTTTTTACGTATTTTGTACCCTTTTCATTTCATTACCTTTTATAATTATC
TTTCGTTACGGTTTTTATCTTAAAATCTAAAATGTAAAAAAAAACACAAG
AATTTGTAAATATTAAAGTTAAATGGAACAAGATGATGGCTTTTGATTTC
CCTATATTTTGAAACGACCTATCTTTGAGGTTCTTCAACTTTGCTTGTCC
GGATGAGTTTTAATTCAGTGTAGTAAATAATTTCGAACAATCTACTGATA
TCGTAATTGCCAATAGACCTTTTCAAAAATTACGTCGCGAACATCGCTTG
CCTCGTATTCAGACAATTACCATGGTGATTATGTTTCTTGAGATATTAAA
TGATTTTTTTATGAATAGGAAGTAGTTTTAATAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013793XLOC_013793Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024560-exon-sc0000502-1575043694:223005..223159TCONS_00024560-exon-sc0000502-1575043694:223005..223159Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1575043694:215419..215529TCONS_00024560-exon-sc0000502-1575043694:215419..215529Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1575043694:215068..215186TCONS_00024560-exon-sc0000502-1575043694:215068..215186Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1575043694:214248..214298TCONS_00024560-exon-sc0000502-1575043694:214248..214298Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1575043694:214043..214123TCONS_00024560-exon-sc0000502-1575043694:214043..214123Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1575043694:213526..213652TCONS_00024560-exon-sc0000502-1575043694:213526..213652Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1575043694:213285..213373TCONS_00024560-exon-sc0000502-1575043694:213285..213373Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1575043694:212700..213022TCONS_00024560-exon-sc0000502-1575043694:212700..213022Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1575043694:212308..212502TCONS_00024560-exon-sc0000502-1575043694:212308..212502Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1575043694:211475..212022TCONS_00024560-exon-sc0000502-1575043694:211475..212022Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1510915933:223005..223159TCONS_00024560-exon-sc0000502-1510915933:223005..223159Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1510915933:215419..215529TCONS_00024560-exon-sc0000502-1510915933:215419..215529Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1510915933:215068..215186TCONS_00024560-exon-sc0000502-1510915933:215068..215186Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1510915933:214248..214298TCONS_00024560-exon-sc0000502-1510915933:214248..214298Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1510915933:214043..214123TCONS_00024560-exon-sc0000502-1510915933:214043..214123Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1510915933:213526..213652TCONS_00024560-exon-sc0000502-1510915933:213526..213652Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1510915933:213285..213373TCONS_00024560-exon-sc0000502-1510915933:213285..213373Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1510915933:212700..213022TCONS_00024560-exon-sc0000502-1510915933:212700..213022Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1510915933:212308..212502TCONS_00024560-exon-sc0000502-1510915933:212308..212502Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1510915933:211475..212022TCONS_00024560-exon-sc0000502-1510915933:211475..212022Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1491911889:223005..223159TCONS_00024560-exon-sc0000502-1491911889:223005..223159Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1491911889:215419..215529TCONS_00024560-exon-sc0000502-1491911889:215419..215529Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1491911889:215068..215186TCONS_00024560-exon-sc0000502-1491911889:215068..215186Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1491911889:214248..214298TCONS_00024560-exon-sc0000502-1491911889:214248..214298Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1491911889:214043..214123TCONS_00024560-exon-sc0000502-1491911889:214043..214123Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1491911889:213526..213652TCONS_00024560-exon-sc0000502-1491911889:213526..213652Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1491911889:213285..213373TCONS_00024560-exon-sc0000502-1491911889:213285..213373Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1491911889:212700..213022TCONS_00024560-exon-sc0000502-1491911889:212700..213022Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1491911889:212308..212502TCONS_00024560-exon-sc0000502-1491911889:212308..212502Clytia hemisphaericaexon
TCONS_00024560-exon-sc0000502-1491911889:211475..212022TCONS_00024560-exon-sc0000502-1491911889:211475..212022Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000502supercontigsc0000502:211475..223159 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
44.9654	49.9762	58.1756	65.4056	5.97014	6.88	11.2657	6.72612	15.1988	13.5263	9.51755	12.8496	7.72371	7.85002	8.79283	11.28	14.5063	9.05482	7.8205	8.26792	9.0116	11.0938	14.2274	15.1629	16.2244	20.4442	10.4363	6.9051	12.5592	11.5629
Blast
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BLAST of TCONS_00024560 vs. Swiss-Prot (Human)
Match: NASP (Nuclear autoantigenic sperm protein OS=Homo sapiens GN=NASP PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 5.680e-23
Identity = 75/250 (30.00%), Postives = 139/250 (55.60%), Query Frame = 1 
Query:  586 VSHMELAWEMLELTCSICSRMVTEKRDIEKAEEMLAEAKYGLAQISMEQEQYERAIEDFNSCLEHYTKTLDDKLDRRIAEIHYNVGLAFSFDKKFEEAVTSFKEAKSLLESRLDVLKGKIEKHERESGKGKAPTELLDWNKEMKELEDLVLLDMNAKIEDAEESKKQADAELVAMKEKTKDLFGALSSATGFETGFGFDEST------PTTEVKVHDATTNV-------RKGSVKRPSDDEGVSDAKKAK 1296
            + ++ELAW+ML+L     ++++ ++++ ++A+   A+A   L ++S+E E Y +A+E+F SCL    + L+   DR +AE HY +GLA+ ++ +++EAV  F ++  ++E+R+ VL  ++++ E  S          ++ KE++EL++L L ++  KIEDA+ES++  +   +A+K    +     SS +GF  G G    +      PT      +  T++       RK   + P  D    DAKKAK
Sbjct:  512 IGNLELAWDMLDL-----AKIIFKRQETKEAQLYAAQAHLKLGEVSVESENYVQAVEEFQSCLNLQEQYLEAH-DRLLAETHYQLGLAYGYNSQYDEAVAQFSKSIEVIENRMAVLNEQVKEAEGSSA---------EYKKEIEELKEL-LPEIREKIEDAKESQRSGNVAELALKATLVE-----SSTSGFTPGGGGSSVSMIASRKPTDGASSSNCVTDISHLVRKKRKPEEESPRKD----DAKKAK 736
The following BLAST results are available for this feature:
BLAST of TCONS_00024560 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NASP5.680e-2330.00Nuclear autoantigenic sperm protein OS=Homo sapien... [more]
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