TCONS_00024730 (transcript) - C. hemisphaerica

Overview
NameTCONS_00024730
Unique NameTCONS_00024730
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2723

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00024730 ID=TCONS_00024730|Name=TCONS_00024730|organism=Clytia hemisphaerica|type=transcript|length=2723bp
GTATGTTGCAAGAAAGAAGATAGATCTGTTTTGTTTGTTCGAAAGTGTCC
gagaaaaaaatgttggatATCTTGCGTCCGGTCTCACATGCTCACGCTGC
TACGCCCGCCATCTTTAATAAAGTTGCCCAGttggaaagaaaaaagACCG
GAGACTTTTTAACGAAAAAGATACGCGCACGACCTAGTCGACAACAGTTA
ATACAAAGACACATCCTCTCTGCAGATTCGCGTGTCGATCCGTCCCTTCT
GGAAAAGGTTGGCAAACTCGAACGTCAACGCATCGCTGATCAACTTAACG
AGCGTCTTCTTCAACGTCCTGGTCCCATCGAGCTTATACAAGATCGAATC
CTTCCTGTCGAATCACCCATACAAAATGCTATCGACCAAGGCAGTGTAGA
CTATCAACAGACCGTTTCCCCCGCTTCCTCACACGCGGATTCGCCTTCCG
TCTCCGAATTAGAGACAGGAATTCACACTTTGAATTGTACTTCACCTTCA
CCGCCCCCTCCGCCACATTCAACGCCACAAGTTCCGCCCTTACCGAACAA
TTTCTCTGATGTATCCTTCAAAAATCAACTTAAAACCGTTTCCGAATCGG
GGAAAACTTCAAACCCGTTATTCGTTTCGGATTCGTTTAAATCTGCACAC
TCTATATCACTCTCACAACGTGAAAACGAACGTCTCGTCAAATCGGTCAA
TAAAAAAACACGTCAACAGAAAccgaaaGTGATGCAACAGAATGCTGTTA
TGAACGCTCTGCAGGGCAACCCAGAATCCATGGATCAAGTGAACGAAGAA
ATTGAACACATGatgcaaaaagaaaataataaaacgaACGATACCAATAT
TAAATCAATAGACGGTAAAAAATTGGACGATTTACGAGTTGTCGATTTAA
GAGCGCAACTCAAACATCGTGGACTCTTAGTATCGGGGGCAAAAGCCAAA
TTGATTGAAAGACTTCTAGCGTTTGAAGAAGGGAAGTCAACTCCCGCCGA
TTTCGCTTATTCGGGAAGTAATTTATCTCACGATGCCAGTATTGTGGCTA
GTAAGACCACGTCCACTATGGTCCCTTCAACCACAGTGATGCAAGTAGCA
ACTTACGCTACAAACAGTGGTCAAACATACCAAGTGGTACAAACCGTCCC
ACAATCCTCTCCCAGCATCATGCAATACCAGGTCGTCCCTGCTACCTCTT
CTTCCGACGAGCAACTCTCTAGACTGGATCAAGTCAACACGGTTCCTGTG
ATGGCCCTCACACAGCCTAGTGTAATGTCAGTTCAAGAGAGAGTAAGCGA
CAAGCCACTTCGCGCCCAAGCAACGCCCTCACCATCGCACATCCAATTCC
ATATCACTCCCCCGCCTCAACCACAAACGCCCACCATCGTTCTCCACTCG
GGGCCGCCTCTGCAACAAGCTTCCCTCTACCAACGACAGCGACAACAAAA
ggtcaaagttcaaaaattacCTGTCATCAGTCAAGGCCAGTGTTTCGATC
TTTCGGAAAGCAACTCGCAACCGCTCGGCCTCTCACAGTCCGTACCACCC
ATGCAACTGAACAATAATTACTTGATGGAAGCGAACCAATGTAATCTCAA
CTACAACACATCTCTCAGTAATTCTTCCCTTCACACAGACGTCAATGCAG
ACAACGACCTCTTTAACAACCCCTCAACGCAATTTCGTGGTCGTGCATCC
AGTGAACCGGCTTCTCAATTGAAGAAAATGCATCCACTGAAATCAGATAG
TACTAAATCAGTGTTTAGCCACCAACAACAAGACCTTTCACTTCAATTCC
CTAAAATGTCACCCTCTCCGTCACTGAGCCTCAAAGATCATCACCAACTA
CCCaattcCATCAAGTCTGAGAATATGGATGACATCATGGACATTATTGG
AGAACTCTCCTCGTCACCAGGCCTTATGAAAGAACCGCCACCTCCTTACA
ACTCGTGTTACTATGACAACAAGAAATTGCTGACAGAGCAAAAACCGTTC
AACACTTCGGACGCGCACGATTTGAACCTTTTATCAGGTTCGCCTTCACA
GAACTTTTTGAACAATTCTTTTTATAACACGGCTGGTTTTAACACCTCCT
CCTCCACCGGAAGCATCCCGCAACAAACCTCACCTACGCCTTTCCGTGGA
ACCTCTCCTTCGCATTTCATGAACACGGCGGCGCTTTCACCCACCAACGC
CACCACGGATGACCCAATGGAGTTGGACCGCTTTCCCTCACCAAACATGA
TGGCGTCCAACAATTCTTTAAACTGGCTCGACCTGAATATGGAACCAAAT
TCTCCTAATATGAATTTTCAGACAATAAAAGACAATAATACTGCGAATAC
CACAAATTCAATGAATATGGATCTTCAGAATGGGATGTTTAGCAACGAGC
TGAACAACCAACAACAAACTTTATATAATAATCAAAACAGACAATCGCAG
AATTCTCTGTTTTACGGTAGCAGTCCTCGACAGCAAGATGgttttatttc
actttttgatctCGAGGGAGGCGAATACTAACTTAACAATTTTTCTTCAc
acgcaaaaaatcaaaaaattctgtTCTTTCTTTCTCATGTAATGAAAATG
ttgtataaattttttttaatttaatatttttttctcaagaaataGTCTTT
TGTTTAATTTTCGTAATTTTCACTTCTTTACGGtaaaaaacttgttttaa
aagttattgaaaattaattaaTA
Run BLAST on NCBI

transcript from alignment at sc0000509:143562..153994+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00024730 ID=TCONS_00024730|Name=TCONS_00024730|organism=Clytia hemisphaerica|type=transcript|length=10433bp|location=Sequence derived from alignment at sc0000509:143562..153994+ (Clytia hemisphaerica)
GTATGTTGCAAGAAAGAAGATAGATCTGTTTTGTTTGTTCGAAAGTGTCC
gagaaaaaaatgttggatATCTTGCGTCCGGTCTGTAAGTAACTTTTATC
TCTTTGACTATATTTGGAAAGATTATATCTTTAACTCCATCCGCAAAGAC
ACACTATGGGATGTCATTTCCATATGGCTTGTGCATCCACCTTTACTTGC
GACACCTGCTGACAACACTATAATGTATGCAGAGGAGTTTGCAACTTTTG
GACAAGTAACATCTCTTTtgttactttaatcggattaatttttgcaacat
tttcggatcagtattttgaaaactttatcGTGGATTTCAATCTTGGCAAG
TTCTcgatgacgtaatcttttatacgggaACAACCAATAAACACCGGGCG
TTAGCCGCCATTCAAAACTGGCGGCAAACGCCCGATGCTTTTCAGGTCTT
TCTGTATTAAAGATTAcgttgtcaatataaaaaatcaGCCAGAAATTTGT
GAAGAGTTGCCCAGTAAACGCTAAAAATAGCATATTTACATTGTATTTTA
CGCTGGaaatctgattttgaaaatttaatacCCCGAGTCGATGGTAAAAA
TTCGTGATAATGCGAAATAAAATCTAGCCAAAATTTATTCAACTAAAATA
ATGCAAGTCCATTGGTATTTATCGCTTAAATGGtaactctctgtaattcg
atttCGAGCTAATtaaaaatactttaatgggataaactttcgcggggatt
aaattttgcggttgggcctatccgcgaaatttttgaatttcgcggggact
ttaTTTCGcaggtggcactattgggttacaatattttcacgattttgtga
cttttccTGTCAAATcttgcatgttggttgttgaaatacacattatttgc
gtctctttgatgcaagtaaccattcaaatagtatttatttgacatgtttt
gagttttgtttagaaatatttcgcggatgaggcccttccaaatttccatt
gggacttgtcgcgaaatctgtgaaatttcatccctgcgaaagtttatccc
ataaAAGTAGTCAATTATTCGAATTGCAGACTGATTTTGCGAGCTTTAGG
AGTTTCGCTTTATTGTGGGTTACGGTTTAGATGCTACAAGCAATACTCTC
AACTATTTTTTAAATGACCCAGTATCGCCTCTCTTTTCTCTACAATTGCT
GACCCCCAAAAAAAGAAGCTCTtgtttaactgaaacaattaTGACGTAAA
CTGATGACGTATGAATGAAGAGAGAGATTCATCTCTTCGTCATTTTACTC
GGAGGTCATATCATCGCGCATCTTGTATTTCAAATTTATGACTTTCAAAT
GAAAACATCACAAAAAAAGGTCAATTATGACAAAAGAAGTCTTGTGGCCT
ACACGATTTTTTGGATGCACTTTTCTCTTACACAAAACTTGATCCATCCC
TCAGTCATGTTTTTGCACTCTGTTTACATTCAATAACCTAAGGCAGTTCA
TTTAATCCTTCTACCGGATTGAATTTAAGTCAACAATAATGGCTTGTATG
TCAATCTAATGCACCAACAATTCTACATATCTTATTTATCTTATTATTCG
CAAATATATCTGATATTCTCCAACCACGCTGAAACATGATACGGAAAAGT
CTCCGTGGAGGAGTCCTCCTTGCCCCTAACACACTACTGAATGACGCTCC
AAAGTCTCTCCTTCACAGTGTTTGACTTTCACTTCGAGCTTTCAGTGTTG
ATTTAACAAGCTATAGCTtactttttaaagatattttcttcCCGTTTCTT
ACCTGCCGTCAACATTATTAACTTTTCTAAAGTATACCATTCTTTATAAT
GCAAAATGACTTTCGTTGTTTTTCCAGCACATGCTCACGCTGCTACGCCC
GCCATCTTTAATAAAGTTGCCCAGttggaaagaaaaaaggtaCGTGTAAT
TTTGACTTGTTTATGCTTTCTTGGAGCCTCACTTACGTACAGAGCAGAAA
GTCTAGAACAGAAAATCTCAAATTATAAAAGGTATTTTATGAAGGTTTTA
GttagctgaaaaattaaaacaatccCTTCTCACGGACTCGGATTGGATTG
ATCGCCAGTTAAATAACCACACAAGTTTTGATTACAGAAACTCAATTGCT
AGGCTTTCTTCATTCTTTTAGACCGGAGACTTTTTAACGAAAAAGATACG
CGCACGACCTAGTCGACAACAGTTAATACAAAGACACATCCTCTCTGCAG
GTAAGCACCCCATTTTTTTTCGCTCAAATTATTTCAGTGTCTTGCTAATT
GTGAGTGATTCTATAAGACGTTTTCTTACTTAGGTGTCCATGTTGTTCTC
AAGTTGAACCCAACAAACATATCTCATCTCATATCTAGTCGACACATCGA
AATTAAAAAGActtattatattttcaattttctcatgAGGGAAGGTTCAG
GGTGACTTATCGGAACTAAAGGTAGCATTCTTTCTGGAGCTGGTAAAGAA
TGTTATCTAAGAGTGGTTTTATTCAAAATACGGACCAGATTTCACTGGTA
TACCTTGGGTACCGATAAGTGCTGTTGATCATCTTCTTTACTTATGTATG
ATattgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctgtctg
tctgtctgtctattGATCTGTAGGTTATTGTTTTTTCTGGTCAAGTGGTG
CGGGTTGAACAGCCTAACCTGAAGAAATAGTTGGCAGTTAAAAGTACGGA
GTGGAAGTTTCAAATTAAGATTATGAGTTCGAACGCTATTTGAGTGTGTT
CAGAAAGTGGTGTATATGAAATTAATTGACATTATAACAACCAGTTAAAA
GAAGTAAATGGATTGACGTCACATAGGAAAAAGGgttttaaacaatattt
tgaatcGTTTTCTTTGACCACAAGATTTGtattggaaaaaactttttggt
tgCACAGCGTTTCGTCACAGGAAGAGACTGCTTTTTCGATGTTTgtgaaa
tttcaagaaaatgtgCGGAAATTGTCTGCCCTCCTCTTTTTATAACTTAC
AAGAGATGATTGGTGATTTCCGCTTATTGAGGTGACCGCAAATGAATTGA
CCGGTTTCCTTCGTATccttctgatgacgtcatttcgaTTTTGAAGGGGC
TCACTTGTTTATATTATCTTAACGTTCCTTTACAAAAactttgaaatgtc
atttttgacaattttgttttgattttggagtGACGCTTTATCCATACCTG
TTTATAGATTACTTAACCTCTGATCACATCTCTTAAGTCTGAATCGACAT
CAAAACACGTGCCTTGTTTCCATGGTAACATATAGATTAAGTCAATTGGT
AATTAATGTTAGCTATAGCCATTTTGTTTAATGACTGTCCACAAAAAAGC
TATTAATATCAACCCTAACCGATAATCAGAGAGTTCTTAGTCTCCTCACC
TTCTTTTGCTTTTGAAAGTTCCATTGAAAGTTCCATTGAAAGTTCcattg
aaaattccattgaaagtTCCATTGAAAGTTCCATTGAAAGTTCCTCAAGA
GTAGCAAGAGAGATACCACACCTGATCTCAGACTTCGGTTTTCAGCTTAT
CGCTTCCTTTTGTGTTTTGTGCATTCCTTTTGTCATTTATTCTCTGTTCT
GTTAAATGCACATCGGGGTTTTTTTGAAGTACAGATGGTCATGGTTAGTC
TatttgtattttcttcagtCCATATAACttaattacacgcttttttataa
gaatacactttataagaatgtccatgatgaaaatggccaaaaacatTAAG
AATAATGTTAAAATATCACCATGGTTAGTGTatttgtattttcttcagtC
CATATAACttcattacacgctttttttataagaatacactttataagaat
gtccatgatgggAATGGCCAAAAACATTAAGAATAATGTTAAAATATCAC
CATGCTTAGTGTatttgtattttcttcagtCCATATAACTTCATTACGTT
CTACTAACCACAGAAACGCATCTCTGCCTGATTCAAATGTGATCTCTAGT
CGCGAAAGGGAATTCCTTTTCctccaaatgaaaaaaaattgcgcgAGTAT
TTCAAACATATCTAGAGCAGTTTTGTACATTTCGCCAGAGATAGGCATGG
GACGACTCGATACAAGGtagtaaataaataataaataattgtGAGAAGTT
CGGTACAAGGTGTATTTGCTGACACACATCTCTTGCCTTTccagaaaagt
tttaaaaagtccTCTTTTTTCTGGAATACGGGGAAACTCAAAAATACATT
GGCAAATATCTAATAGGTAATTCAGGCtttcaatatttattcaatagATT
AAGTAATTAATAAATTTTGGTCTAATTTTTCCCGTAATTATCAAATTCAA
TATTGATAATGAGACGGAGTTACTTCGCAAATTTGAATcgattgaaaaat
gattaaaaaactCGCTCCGCATATTGACGTTTTTCCTGAAATCTCCAATT
TCATAGTGTTTCCTGATGGATAGATACTGTGGTGGAGCAATCCCTCTCAT
CAAACAAAAGGGGAAAATATAATCGGATGTTATTAATCATAGCCTTGATT
AGCACGTACAATGATGGCATTTTGTGTTCtcttattttgttttattttgt
tcaagTGTTATGATACGTACACACATACAAACATATATGCTAGGAGAAAG
TCACTTCGAGGAGTGAGAGAGAACTtttgtttgaaagaaatttcattgAT
GTCTTTAATGGAAGCTTTCTATTGCTAAGCATCGTCATGACTGTCAGAAT
ATTgcgaaaaaactcaaaaaactctCTGTGTAGGTTCTTATTGGTGATAT
TATAACTATTTCTGTTGCTAAAAAGAATTGTTGGTTAATTCATTCATTTC
TTGTGTTCATAATTTTATTTAGTAGAATACCAAAGAATACACATTGTCAA
AATGTTCATTTATGCAAGTTTTTTTTCGATCGTTTTATTTCTTCGTGCTT
CTTTTTCAGATTCGCGTGTCGATCCGTCCCTTCTGGAAAAGGTTGGCAAA
CTCGAACGTCAACGCATCGCTGATCAACTTAACGAGCGTCTTCTTCAACG
TCCTGGTCCCATCGAGCTTATACAAGATCGAATCCTTCCTGTCGAATCAC
CCATACAAAATGCTATCGACCAAGGCAGTGTAGACTATCAACAGACCGTT
TCCCCCGCTTCCTCACACGCGGATTCGCCTTCCGTCTCCGAATTAGAGAC
AGGAATTCACACTTTGAATTGTACTTCACCTTCACCGCCCCCTCCGCCAC
ATTCAACGCCACAAGTTCCGCCCTTACCGAACAATTTCTCTGATGTATCC
TTCAAAAATCAACTTAAAACCGTTTCCGAATCGGGGAAAACTTCAAACCC
GTTATTCGTTTCGGATTCGTTTAAATCTGCACACTCTATATCACTCTCAC
AACGTGAAAACGAACGTCTCGTCAAATCGGTCAATAAAAAAACACGTCAA
CAGAAAccgaaagtaaaaaaattgaaattccacGAATGTCTACCGGGGTC
CGGTACCGTGAAAAAAGTGGAGGCGGAAAGTGAGGTCGTAGATGAGCGAT
ACCAGAGACTTTTGGAGCAACAGACTTTATATTTACGCTTACAGGTGATG
CAACAGAATGCTGTTATGAACGCTCTGCAGGGCAACCCAGAATCCATGGA
TCAAGTGAACGAAGAAATTGAACACATGatgcaaaaagaaaataataaaa
cgaACGATACCAATATTAAATCAATAGACGGTAAAAAATTGGACGATTTA
CGAGTTGTCGATTTAAGAGCGCAACTCAAACATCGTGGACTCTTAGTATC
GGGGGCAAAAGCCAAATTGATTGAAAGACTTCTAGCGTTTGAAGAAGGGA
AGTCAACTCCCGCCGATTTCGCTTATTCGGGAAGTAATTTATCTCACGAT
GCCAGTATTGTGGCTAGTAAGACCACGTCCACTATGGTCCCTTCAACCAC
AGTGATGCAAGTAGCAACTTACGCTACAAACAGTGGTCAAACATACCAAG
TGGTACAAACCGTCCCACAATCCTCTCCCAGCATCATGCAATACCAGGTC
GTCCCTGCTACCTCTTCTTCCGACGAGCAACTCTCTAGACTGGATCAAGT
CAACACGGTTCCTGTGATGGCCCTCACACAGCCTAGTGTAATGTCAGTTC
AAGAGAGAGTAAGCGACAAGCCACTTCGCGCCCAAGCAACGCCCTCACCA
TCGCACATCCAATTCCATATCACTCCCCCGCCTCAACCACAAACGCCCAC
CATCGTTCTCCACTCGGGGCCGCCTCTGCAACAAGCTTCCCTCTACCAAC
GACAGCGACAACAAAAggtcaaagttcaaaaattacCTGTCATCAGTCAA
GGCCAGTGTTTCGATCTTTCGGAAAGCAACTCGCAACCGCTCGGCCTCTC
ACAGTCCGTACCACCCATGCAACTGAACAATAATTACTTGATGGAAGCGA
ACCAATGTAATCTCAACTACAACACATCTCTCAGTAATTCTTCCCTTCAC
ACAGACGTCAATGCAGACAACGACCTCTTTAACAACCCCTCAACGCAATT
TCGTGGTCGTGCATCCAGTGAACCGGCTTCTCAATTGAAGAAAATGCATC
CACTGAAATCAGATAGTACTAAATCAGTGTTTAGCCACCAACAACAAGAC
CTTTCACTTCAATTCCCTAAAATGTCACCCTCTCCGTCACTGAGCCTCAA
AGATCATCACCAACTACCCGTAAGTTCAACATTCCCGCATCTacaatata
ttgagaatttcagttttttaacgtttttcaagatttaaagtcccggcgag
aaagtcgattttgggctatctctttaatctaattgaatatttcaatttgg
gaggggtcgtcagacttccaggctatattctgagccttattggactatct
ttgaacttttggatcttcAGATCCTAAAGTCGTAAAtgttaagtctagcg
ttaaaactcagagttaaaactctacccttcgaacctactttagagcactt
tcaaatcgattgtggttcacttcccggtgaatttcccttttttctcaaat
attatgaccttgattgtatttCTGTGTTTTCATCGTCGTTAAATATTGAT
GACTCTGCTACAATGTTCAACGAGAAGTTGGGTGGGTTTGTTCAACGAGT
GAAATCGTTTATCTGTCTGGTCTGAAGTGAATTTACGACTAACAGTTAGA
GTGTAGCttttaaaatatgtaaaaagatgACTGTACCACATCTTGCAGAT
GTTGTATAACTCTGCTGATAACAGAAGACCATTATCTCAAATATTGCCAT
TCTCTCCATCATAACTTATCTCCACAATATTTTGCTTTTTAGAATTCCAT
CAAGTCTGAGAATATGGATGACATTATGGACATTATTGGAGGTcagcttt
tttttttcatcgctCTATTTTCTCCTGTTGTGTCAAATTTGTACACGTGA
ACACCAAACTTAGTCTTCTGAGCCCAAACCACCTTTTTCCCCATTCCACA
AAATCTACATGAGTGAAGAATCAGTATGGTGATGACATTGAGTGATTTCA
ATTTAAATGCTTTTGAAAATCGTCCAATCACAAGACTAGAAAGACCTTTC
AATCAccaatttgaatgtttttgaaaatcgtcCAATCACAAGACTAGAAA
GACCTGTCAATCGCCCGATTCGTTAGTCGACAGGTTACCATCAATTCTAG
CGCCGCCAGGGGATTGGGTTCAAGTTTTTTAGCGTCTGTTGTCTTCAAGC
GAGTTTATTCTCCAGACATATGACGACATCCGACCATGTTAAATTTGGAC
TCAACCCCCTTGATGGCTTAGGGCTTGATGTGTGGATCGCATgacatcaa
ttttcaatttattgaagAGTTCTTTCTTGTCTGGTTAACAGGAGATGTGT
TCAAATTAGTCACGCTTGAACGACTCGCGTTTTTTGTGATCAAAACCTTT
TAGCCACTGACATGTTCGGTCAACACACCTGTAGGTGATCAAGCCCCCTA
AAATGGACCGACTTTCGCTATGAGCTCACTACTAACTTTCCATGTATTAA
TTTTTCAGAACTCTCCTCGTCACCAGGCCTTATGAAAGAACCGCCACCTC
CTTACAACTCGTGTTACTATGACAACAAGAAATTACTGACGGAGCAAAAA
CCGTTCAACACTCCGGACGCGCACGATTTGAACCTTTTATCAGGTTCGCC
TTCACAGAACTTTTTGAACAATTCTTTTTATAACACGGCTGGTTTTAACA
CCTCTTCCTCCACCGGAAGCATCCCGCAACAAACCTCACCTACGCCTTTC
CGTGGAACCTCTCCCTCACATTTCATGAACACGGCGGCGCTTTCACCCAC
CAACGCCACCACGGATGACCCAATGGAGTTGGACCGCTTTCCCTCACCAA
ACATGATGGCGTCCAACAATTCTTTAAACTGGCTCGACCTGAATATGGAA
CCAAATTCTCCTAATATGAATTTTCAGACAATAAAAGACAATAATACTGC
GAATACCACAAATTCAATGAATATGGATCTTCAGAATGGGATGTTTAGCA
ACGAGCTGAACAACCAACAACAAACTTTATATAATAATCAAAACAGACAA
TCGCAGAATTCTCTGTTTTACGGTAGCAGTCCTCGACAGCAAGATGgttt
tatttcactttttgatctCGAGGGAGGCGAATACTAACTTAACAATTTTT
CTTCAcacgcaaaaaatcaaaaaattctgtTCTTTCTTTCTCATGTAATG
AAAATGttgtataaattttttttaatttaatatttttttctcaagaaata
GTCTTTTGTTTAATTTTCGTAATNTCAGAGGACCATTACCTCAAAGATTA
CCATTCTCTCCATCATAACTTATCTCcacaatattttgtttttagaattc
CATCAAGTCTGAGAATATGGATGACATCATGGACATTATTGGAGGTCagc
tttttttcttcatcactTTATTTTCTCCTGTTGTGTCAAAATTGTACACG
TGAACCCTGCGTGAACACCAAACTTAACAGCCTTCTGAGCCGAAACCACC
TTTTTTTCCATTCCACAAAATTTACATGAGTGAAGAATCAGTATGGTGAT
GACATTGAGTGATTTCAATTtaaatgcttttgaaaattgTCCAATCACAA
GACTAGAAAGACCTGTCAATCACCCGATTCGTTAGTCGACAGGTTGCCAT
CAATTCTAGCACCGCAAAGGGGTAGGGTTCAAGTTTTTCAGCGTTGGTTG
TCTTCAAACGAGTTTATTCTCGTACATATGACGACATCCGACCATGTTAA
ATTTGGACTCAACCCCCTTGATCGCTTAGGGCTTGATGTGTGGATCGCAT
gacatcaattttcaatttgaagaGTTCTTTCTTGTCTGGTTAACAGGAGT
TGTGTTTGAATTAGTCAAGCTTAGATGACTCGCGTTTTTGTGATCAAAAC
CTTTTAGCCACTGACATGTTCGGTCAACACACCTGTAGGTGATCAAGCCC
CCTAAAATTGTACGACTTTCGCTATGAGCTCACTACTAACTTTCCATGTA
TTAATTTTTCAGAACTCTCCTCGTCACCAGGCCTTATGAAAGAACCGCCA
CCTCCTTACAACTCGTGTTACTATGACAACAAGAAATTGCTGACAGAGCA
AAAACCGTTCAACACTTCGGACGCGCACGATTTGAACCTTTTATCAGGTT
CGCCTTCACAGAACTTTTTGAACAATTCTTTTTATAACACGGCTGGTTTT
AACACCTCCTCCTCCACCGGAAGCATCCCGCAACAAACCTCACCTACGCC
TTTCCGTGGAACCTCTCCTTCGCATTTCATGAACACGGCGGCGCTTTCAC
CCACCAACGCCACCACGGATGACCCAATGGAGTTGGACCGCTTTCCCTCA
CCAAACATGATGGCGTCCAACAATTCTTTAAACTGGCTCGACCTGAATAT
GGAACCAAATTCTCCTAATATGAATTTTCAGACAATAAAAGACAATAATA
CTGCGAATACCACAAATTCAATGAATATGGATCTTCAGAATGGGATGTTT
AGCAACGAGCTGAACAACCAACAACAAACTTTATATAATAATCAAAACAG
ACAATCGCAGAATTCTCTGTTTTACGGTAGCAGTCCTCGACAGCAAGATG
gttttatttcactttttgatctCGAGGGAGGCGAATACTAACTTAACAAT
TTTTCTTCAcacgcaaaaaatcaaaaaattctgtTCTTTCTTTCTCATGT
AATGAAAATGttgtataaattttttttaatttaatatttttttctcaaga
aataGTCTTTTGTTTAATTTTCGTAATTTTCACTTCTTTACGGtaaaaaa
cttgttttaaaagttattgaaaattaattaaTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_013888XLOC_013888Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00024730-exon-sc0000509-1491911889:143562..143645TCONS_00024730-exon-sc0000509-1491911889:143562..143645Clytia hemisphaericaexon
TCONS_00024730-exon-sc0000509-1510915933:143562..143645TCONS_00024730-exon-sc0000509-1510915933:143562..143645Clytia hemisphaericaexon
TCONS_00024730-exon-sc0000509-1575043694:143562..143645TCONS_00024730-exon-sc0000509-1575043694:143562..143645Clytia hemisphaericaexon
TCONS_00024730-exon-sc0000509-1491911889:145439..145500TCONS_00024730-exon-sc0000509-1491911889:145439..145500Clytia hemisphaericaexon
TCONS_00024730-exon-sc0000509-1510915933:145439..145500TCONS_00024730-exon-sc0000509-1510915933:145439..145500Clytia hemisphaericaexon
TCONS_00024730-exon-sc0000509-1575043694:145439..145500TCONS_00024730-exon-sc0000509-1575043694:145439..145500Clytia hemisphaericaexon
TCONS_00024730-exon-sc0000509-1491911889:145733..145811TCONS_00024730-exon-sc0000509-1491911889:145733..145811Clytia hemisphaericaexon
TCONS_00024730-exon-sc0000509-1510915933:145733..145811TCONS_00024730-exon-sc0000509-1510915933:145733..145811Clytia hemisphaericaexon
TCONS_00024730-exon-sc0000509-1575043694:145733..145811TCONS_00024730-exon-sc0000509-1575043694:145733..145811Clytia hemisphaericaexon
TCONS_00024730-exon-sc0000509-1491911889:148571..149073TCONS_00024730-exon-sc0000509-1491911889:148571..149073Clytia hemisphaericaexon
TCONS_00024730-exon-sc0000509-1510915933:148571..149073TCONS_00024730-exon-sc0000509-1510915933:148571..149073Clytia hemisphaericaexon
TCONS_00024730-exon-sc0000509-1575043694:148571..149073TCONS_00024730-exon-sc0000509-1575043694:148571..149073Clytia hemisphaericaexon
TCONS_00024730-exon-sc0000509-1491911889:149206..150330TCONS_00024730-exon-sc0000509-1491911889:149206..150330Clytia hemisphaericaexon
TCONS_00024730-exon-sc0000509-1510915933:149206..150330TCONS_00024730-exon-sc0000509-1510915933:149206..150330Clytia hemisphaericaexon
TCONS_00024730-exon-sc0000509-1575043694:149206..150330TCONS_00024730-exon-sc0000509-1575043694:149206..150330Clytia hemisphaericaexon
TCONS_00024730-exon-sc0000509-1491911889:152507..152555TCONS_00024730-exon-sc0000509-1491911889:152507..152555Clytia hemisphaericaexon
TCONS_00024730-exon-sc0000509-1510915933:152507..152555TCONS_00024730-exon-sc0000509-1510915933:152507..152555Clytia hemisphaericaexon
TCONS_00024730-exon-sc0000509-1575043694:152507..152555TCONS_00024730-exon-sc0000509-1575043694:152507..152555Clytia hemisphaericaexon
TCONS_00024730-exon-sc0000509-1491911889:153174..153994TCONS_00024730-exon-sc0000509-1491911889:153174..153994Clytia hemisphaericaexon
TCONS_00024730-exon-sc0000509-1510915933:153174..153994TCONS_00024730-exon-sc0000509-1510915933:153174..153994Clytia hemisphaericaexon
TCONS_00024730-exon-sc0000509-1575043694:153174..153994TCONS_00024730-exon-sc0000509-1575043694:153174..153994Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000509supercontigsc0000509:143562..153994 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.78021e-09	0	0	0	0	0	0.350455	0	1.06305	1.31051	0	0.293023	0.962319	0.332121	0.492644	1.46652	1.70316	0.487518	2.50496	0.673334	0.377664	0	0.552801	0	0	0	0	5.92577e-07	0	1.31554
Blast
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BLAST of TCONS_00024730 vs. Swiss-Prot (Human)
Match: MKL1 (MKL/myocardin-like protein 1 OS=Homo sapiens GN=MKL1 PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 2.154e-20
Identity = 50/102 (49.02%), Postives = 74/102 (72.55%), Query Frame = 3 
Query:  102 TPAIFNKVAQ-LERKKTGDFLTKKIRARPSRQQLIQRHILSADSRVDPSLLEKVGKLERQRIADQLNERLLQRPGPIELIQDRILPVESPIQNAIDQGSVDY 404
            +PA F++  + LER +T D+L +KIR+RP R +L++ HIL  ++  +PSL  K  KL+R R+AD LNE++ QRPGP+EL++  ILPVES ++ AI  G V+Y
Sbjct:    6 SPAAFHEQRRSLERARTEDYLKRKIRSRPERSELVRMHILE-ETSAEPSLQAKQLKLKRARLADDLNEKIAQRPGPMELVEKNILPVESSLKEAIIVGQVNY 106
The following BLAST results are available for this feature:
BLAST of TCONS_00024730 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MKL12.154e-2049.02MKL/myocardin-like protein 1 OS=Homo sapiens GN=MK... [more]
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