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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00024828 ID=TCONS_00024828|Name=TCONS_00024828|organism=Clytia hemisphaerica|type=transcript|length=774bp
CCGCTCTTGGACGTCGAGAGGATGGTCGGGTATTGCTGCGATGCTTGGAC
ATGATGCATGGAACGATTTCTTCTTCAATTGGTGTTGGAGAGAAAGTCTA
CGTTTATGGCTTGCTACACCAGTGAAATGAccattcaagaaaaccattat
GTGTGCCCACCAAAGGGTCTCCTTTCCTTAAAAAGTTCGGCTCCTTTCGG
CTCTTTGTTCTGTGGTAACTCTTTCAACGATTGGTTGgttgcaaattttg
aaaaactgaatCCGGACGGTTGGTAAGTTAGATACAAACGAATCTCGGTA
GAAATTCAGACTTTAGAACTTCGACCAGTATGAGCTTCTGATCGATAGTG
AAACTTCAAAGTTTTGACTGCTAGCTAACCGTTCCAAACCAGTTAATACA
ACTGCTCAAGATTAATTTTACAGTGCCTATCCGTTCATTTCAGTCTTCCG
TCTATTAGCTCTCTTAGTAGACTGTCTTTAGAATGCCTTTCATAGCCATG
AAGCGTTCACCGTGTCCTTGATGTTACAGAAGACTCTCCCTTATTCACTG
TTTTAAAATACTTCTACCattcaaatctctctgtaatttgaacaaataag
attccacGTTTGTTTTCGAATTATCGACAGTCAACTGTAACTCTAACACA
AAAACAGGTGAAACAACattatgaaaaaattgtaaaataagcAATACGCA
AGATATATACCAGGACTGACAATTCCTTATATTGACCACCAATGGACTAA
GCCGAGCTGCATTTGtgttatttt Run BLAST on NCBI transcript from alignment at sc0000511:46134..47166- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00024828 ID=TCONS_00024828|Name=TCONS_00024828|organism=Clytia hemisphaerica|type=transcript|length=1033bp|location=Sequence derived from alignment at sc0000511:46134..47166- (Clytia hemisphaerica)
CCGCTCTTGGACGTCGAGAGGATGGTCGGGTATTGCTGCGATGCTTGGAC
ATGATGCATGGAACGATTTCTTCTTCAATTGGTGTTGGAGAGAAAGTCTA
CGTTTATGGCTTGCTACACCAGTGAAATGACCATTCAAGAAAACCATTAT
GTGTGCCCACCAAAGGGTCTCCTTTCCTTAAAAAGTTCGGCTCCTTTCGG
CTCTTTGTTCTGTGGTAACTCTTTCAACGATTGGTTGGTTGCAAATTTTG
AAAAACTGAATCCGGACGGTTGGTAAGTTAGATACAAACGAATCTCGGTA
GAAATTCAGACTTTAGAACTTCGACCAGTATGAGCTTCTGATCGATAGTG
AAACTTCAAAGTTTTGACTGCTAGCTAACCGTTCCAAACCAGTTAATACA
ACTGCTCAAGATTAATTTTACAGTGCCTAATAAAGATATCAAAATAAATA
GTTAATTGAAAGAATTTACAAACAGTCAGATAAAATATTTCAATTAATTA
TAATCCCATAGTAAACTCTGTGAATCACTGTGATGTGTGATGTGTAGTGT
AGCAGGAATGCTCACAACGCTTCTCAAATTATCAAAAATTTATATGTCTG
GGTAAAAATAGTGTAGTGGGTAAAAAAACTGTAGTCGAAATTTTTAGCAA
AACTTTTTTTTCCGGCAGCCTCCTCTCAAGTTTTTCACTCCGTTCATTTC
AGTCTTCCGTCTATTAGCTCTCTTAGTAGACTGTCTTTAGAATGCCTTTC
ATAGCCATGAAGCGTTCACCGTGTCCTTGATGTTACAGAAGACTCTCCCT
TATTCACTGTTTTAAAATACTTCTACCATTCAAATCTCTCTGTAATTTGA
ACAAATAAGATTCCACGTTTGTTTTCGAATTATCGACAGTCAACTGTAAC
TCTAACACAAAAACAGGTGAAACAACATTATGAAAAAATTGTAAAATAAG
CAATACGCAAGATATATACCAGGACTGACAATTCCTTATATTGACCACCA
ATGGACTAAGCCGAGCTGCATTTGTGTTATTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00024828-exon-sc0000511-1575043694:46738..47166 | TCONS_00024828-exon-sc0000511-1575043694:46738..47166 | Clytia hemisphaerica | exon |
| TCONS_00024828-exon-sc0000511-1575043694:46134..46478 | TCONS_00024828-exon-sc0000511-1575043694:46134..46478 | Clytia hemisphaerica | exon |
| TCONS_00024828-exon-sc0000511-1510915933:46738..47166 | TCONS_00024828-exon-sc0000511-1510915933:46738..47166 | Clytia hemisphaerica | exon |
| TCONS_00024828-exon-sc0000511-1510915933:46134..46478 | TCONS_00024828-exon-sc0000511-1510915933:46134..46478 | Clytia hemisphaerica | exon |
| TCONS_00024828-exon-sc0000511-1491911889:46738..47166 | TCONS_00024828-exon-sc0000511-1491911889:46738..47166 | Clytia hemisphaerica | exon |
| TCONS_00024828-exon-sc0000511-1491911889:46134..46478 | TCONS_00024828-exon-sc0000511-1491911889:46134..46478 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000511 | supercontig | sc0000511:46134..47166 - |
Blast
The following BLAST results are available for this feature:
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