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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025257 ID=TCONS_00025257|Name=TCONS_00025257|organism=Clytia hemisphaerica|type=transcript|length=2208bp
TAAACAACGTAGTTTTGAATACTCGTGAACGAAAGGAGCAAATTAAACCA
TGGGTTGGATAAAGAAAACCTTCATCTTTGCCCTTCCAATACTTTCTTAC
TACATTTACAAGATTGTAaaagcaaactttttgatcttTGTTATAATCAC
GAGTCAGATTTACCCAAGACTTCCAATCAAGAATTTCGCAAAGTTGAATC
CTGACATTGCAGATTTTGCGACAGGAGATGATCAAATAGTTGATGAATAT
GATTTTGTGATAATTGGTGCAGGATCTGCAGGAGCTGTTGTTGCTAACCG
TTTAAGTGAGAACAAATCATGGAAAGTTCTTCTGCTGGAAGCTGGTGGTG
GGGAAACCATGCTGAGTGAGATCCCAGCAACAACAGTTCTTAACTTCAAC
ACATCCATTGATTGGTCCTTTTTATCAGAGCCGGCCAATGATGGAAAGAC
TTCAACAATCTTTAAAAATGGACAACTGGTCATGCCAAGGGGAAAAGTTC
TTGGAGGGTCAAGCACCATCAATGTGATGGGTTACACACGTGGTAATAAA
CGAGATTATGATTTGTGGGAGGAGCAAGGAAACCCAGGATGGAGTTATGA
AGATGTGTtaccatatttcaaaaaatctgaagACCAAACCAATGAAAAGC
TTACCAAAGATACAAAGTACCATTCAACAGGCGGCTATCTTACCATTGAA
GATGTAGAAAAAGCTgatgtttttgtgaaattgatgGACGGCTTTAGTAA
GATTTTACCGGAGAATAAGGATTATAATGGTGCAAAACAATCTGGAACTG
TATTTTATCAAAACACGATCAGGAATGGCCAGAGATGCAGTACAGCCAAA
GCTTACCTCAAACCCAAGAGATCAAATCTCCACGTCAGTCCTTTTTCACA
TGTTCAAAAGATTTTGATAGATCCTGAAACGAAAACAGCCGAAGGTGTTG
TTTATAAGAAGAATGGAAAATCAATGACAGTCAAAGCAAAGAAAGAAGTT
ATCTTGTCTGCTGGTGCTTTTGGCTCTCCTCAGATCTTAATGTTATCAGG
AGTTGGTCCAAAGGAGGAATTGGAAAAACATGGAATTCCGATCATCAAAG
AACTTCAAGTTGGATACAATTTACAAGATCATGTCAGCGTCTTAACGCAC
TTGGTCTTCAATGAATCAATATCGTGGCCAGTTGAaagAATCATTAAATA
CGACACCTACAAGAAATATCATGATAGCCGTGAAGGTATTCTTGGTTCTG
GAGGTGTCTTCACATCCTTTCTTCCCACAACTGAAGAATCAAAGCGAACC
GATTACCCAGAGATGCAGATCTTTGGATTACCACACCTGGCATCAGCAAC
AGATTATAAGGATGTGTTCAATTTTGATGAGGAGTATTGGACCAATGTTT
ACCAGCCTGGGTTGGAAGGACAAGAGGGATATTCTTATTTCAATTGTCTC
TTAAGACCAAAGAGCAGAGGGCACATCAAATTAAGAAGCAATGACCCTGA
AGACCATCCACTCATCATACCCAACTATTTCGACAACGAAGAAGATCTTA
TACCTTTTGTCGAAGCTTtcaaatttggaaagaaatttgCTGCTGCACTT
GACAAGTACAATGCCACGGTTCCTGATTTGAAAGATCCAGTTTGTGAAAA
ATTTGCACAAGAAGATGATTACATGAAATGCATTGCAAAAAGAGGAGCCA
CCACCGGTTACCACCCAGTGGGTACATGCAAGATGGGACCCCATACTGAT
GATCAAGCAGTTGTAGATTCAAGATTGAAAGTTTATGGTATCAAAGGATT
ACGTGTTGTCGATGCATCAATCATGCCAACCATTGTCAGTGGAAATACTA
ATGCACCTACAATTATGATCGCTGAAAAAGCTGCTGATATCATTAAAGAG
GACTGGAAAAACTGATAGAAATGAACTTTGGAGAAGCTGACATCGATTTA
TGGAATCATTGACATACATAATTGTAGATGAGCGAGAGATCTTTAAATAT
ATTATTCCACTAAATGTCATTGTATAcccgggggcactcgatttcgaaac
gacggtatgtaaatctgcttttcaaaatcgtacccttacagtgcagttca
atatggctgaaaaattaccctttcagtgcattttctcatgatttacccaa
cccttatagtgcactatatttttGAGCTGTAAATATCTGCGTGAaaaaag
aagcttgg Run BLAST on NCBI transcript from alignment at sc0000529:203338..211795+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025257 ID=TCONS_00025257|Name=TCONS_00025257|organism=Clytia hemisphaerica|type=transcript|length=8458bp|location=Sequence derived from alignment at sc0000529:203338..211795+ (Clytia hemisphaerica)
TAAACAACGTAGTTTTGAATACTCGTGAACGAAAGGAGCAAATTAAACCA
TGGGTTGGATAAAGAAAACCTTCATCTTTGCCCTTCCAATACTTTCTTAC
TACATTTACAAGATTGTAaaagcaaactttttgatcttTGTTATAATCAC
GAGTCAGATTTACCCAAGACTTCCAATCAAGAATTTCGCAAAGTTGAATC
CTGACATTGCAGATTTTGCGACAGGAGATGATCAAATAGTTGATGAATAT
GATTTTGTGATAATTGGTGCAGGATCTGCAGGAGCTGTTGTTGCTAACCG
TTTAAGTGAGAACAAATCATGGAAAGTTCTTCTGCTGGAAGCTGGTGGTG
GGGAAACCATGCTGAGTGAGATCCCAGCAACAACAGTTCTTAACTTCAAC
ACATCCATTGATTGGTCCTTTTTATCAGAGCCGGCCAATGATGGAAAGAC
TTCAACAATCTTTAAAAATGGACAACTGGTCATGCCAAGGGGAAAAGTTC
TTGGAGGGTCAAGCACCATCAATGTGATGGGTTACACACGTGGTAATAAA
CGAGATTATGATTTGTGGGAGGAGCAAGGAAACCCAGGATGGAGTTATGA
AGATGTGTtaccatatttcaaaaaatctgaagACCAAACCAATGAAAAGC
TTACCAAAGATACAAAGTACCATTCAACAGGCGGCTATCTTACCATTGAA
GATGTAGAAAAAGCTgatgtttttgtgaaattgatgGACGGCTTTAGTAA
GATTTTACCGGAGAATAAGGATTATAATGGTGCAAAACAATCTGGAACTG
TATTTTATCAAAACACGATCAGGAATGGCCAGAGATGCAGTACAGCCAAA
GCTTACCTCAAACCCAAGAGATCAAATCTCCACGTCAGTCCTTTTTCACA
TGTTCAAAAGATTTTGATAGATCCTGAAACGAAAACAGCCGAAGGTGTTG
TTTATAAGAAGAATGGAAAATCAATGACAGTCAAAGCAAAGAAAGAAGTT
ATCTTGTCTGCTGGTGCTTTTGGCTCTCCTCAGGTAATAATTGTGTTGTT
AAAAAGAATAGTATTTCCCTGTGTATCTTTAAGTGCCAAAACTCTCGAAA
CCCTAAGTTTGGACAATACTGCaaatcttgtttttattaaacCTCATCAA
AACGTCAAGCCTGGAATTACTAGGTAATTTAGTTTGATTTTCTCTCATTT
TAGATCTTAATGTTATCAGGAGTTGGTCCAAAGGAGGAATTGGagaaaca
tggaatttcgatcATCAAAGAACTTCAAGTTGGATACAATTTACAAGATC
ACGTGAACGTTTTTTCGCATATGATTTTCAATGAGTCTATTGAACTTCCA
TCCAAAGAGTAAGTTTGATAATGTCATAAAACTTAGGACACTGAATATTT
CTAGGACTGAATTATGGAATGCTCTGCTCCATTGCCCTGTCGTGGAAATT
ACCCTTCCAAAACTTGAGCTGTAGTCATTAACTTCCGTAGCTAGAGGTCA
AAAAAGGCATCTATAcatcatttttatcaatattagGGTTTCAATATCCT
GCTTTATGTATGGAATTCAtacatttcaaaattccattgaaaCATGACCA
AGACGGCATTGTTTACTTTCAGGGTTATTTCGTTCGACACATTCAAAGAA
TACTATGAACAAAGAACAGGCCATCTCAGGAGTAATGGCGCAGGTCTTGG
GATGTTTGTTCCTTTGTCTGAAGAAGCCAAATCTAAAGATTGGCCAGAGA
TTCAATCACATTTTTTACTTCAACTAATGACGGATGTCGCTGATACTCAA
TGGATTTTCAAATACAATGAAGAATTTTGGAATAATGTTTTGCTTCGGGA
GCTAGAAGGGAAACATGGTGTAACCTACTTTAATTGTCTCTTGCGACCAA
AAAGCAGgtagtttttttatatatttctaaaaaatacacccctgtatcac
aggcCCGATGAGACTCCACCCCACAAGAAAATTTTGTCGAGATTTCGTCC
CTGGTGggaaaaatgtataatttgacTGAAAAGTGTCCCAACAGAGttct
gagaaaggggtgtaaaaataTTGTAATAGAATAAATATATTGAAggtgag
accaatttgattagttgttttacgggcccgaccaaCCCTGACATTCCAAA
AATCAGAATAaagataaaattgattttggtagtacatttttatttttatt
gttttccagaatgccaaattttcaaaattttggtagtttttcaaggtttt
gagaatttaatgttcaatttttcattttatccataaaTTTGAGCTTTCTG
TGTCTTTTATTTTCTATTATGCATTTTTGTCTAGATgaagtagtttttgc
tgcctttttaggagattttagaGATGAAATTCTcctttaagttttatttt
ttctccgaccgaccgaccctcttttttgggtagcttcgcccgtaaaacaa
caaattaaattggcctcgcctgaGAAAAAGAGTTTAACTTGAACCTAGAC
AAAAACAAACTGATTGGAATCCTTggaaccaaaacaaaattaGGGCAAAT
TTTTCTATGCAAGTTATTTGACTCAGAAATTTGGGAATCGGAATAAAATA
GCCTTCGTTTtactcgaaaaaaaatttcacgttTCTTCGGTGAATAgttt
tttagaaatcaaaagttgaaagtTCATTGCGTTCTTTTCTGGCCCATCCG
GTATGACGGGTACAAATAATATCTTCAAATGATTGATCTCTGCTTTCCCC
CAAAGAGCTCCTTCAGTTTGCGTTAAAAACAAACGAAATACCACTCTACT
TTTAGAGGACGCGTCAAGTTAAGGAGCAACGACACTCAAGACCATCCACG
AATCATTCCGAACTATTTCACCCACCCTGACGACCTGAATACCTTCATTG
AATCTTTCAAATTCGGAAAGAAACTAGCAGCAACATTACCACAATANTCC
GAACTATTTCACCCACCCTGACGACCTGAATACCTTCATTGAATCTTTCA
AATTCGGAAAGAAACTTGCAGCAACATTACCACAATACAATGCATCGATT
GTCGACTTGAAGGATCCGGCATGCATTGAATATGCATCAGGTTTGTCATT
ATGTCATCGTCATTAATAATACAGTTTTATCAAGTGTGATTATTTTTGTT
GAATATACGATGGAAAGATAAAAGTTTGCGTAATTGACGGTGAATAGTTG
AAAATTCACGGTAATTTTCTGATTTGATTATGCAGAGTGGTCACAACGGA
AAATTTTCCTATTCTTCTTTTAGTACGCTTAGACCAAAATGAAATATTGC
TATAGTCTAACACCCTTAACTATGCCTGAAATGATATatcattgaaaaga
aattccTTTGGCAATTTTCCCTGTTTTTGTNACTATGCCTGAAATGATAT
atcattgaaaagaaattccTTTGGGAATTTCCCCTGTTTTTTCTTCAGGT
TCAGATGACTATTACCGATGTACAGCGGTTCGAGGAGCATCAACACTCTA
CCATCCAGTGGGTACGTGCAAGATGGGACCCCATACTGATGATCAAGCAG
TTGTAGATTCAAGATTGAAAGTTTATGGTATCAAAGGATTACGTGTTGTC
GATGCATCAATCATGCCAACCATTGTCAGTGGAAATACTAATGCACCTAC
AATAATGATCGCTGAAAAAGCTGCTGATATGATCAAAGAGGACTGGAAAG
ACAAATAATGAAAAGCTATCACATCAAATGGAGGACAGTGCTGTATTTTT
TGGAGTAATTCTATGATTTCCTAATGATTCTTGATACTTAGTTTTAGCAT
TTTGTATATTTATGAGCTGGTCAGGGAAAGTTATGACGAGAGGGGGGAAG
GTCCTATTCCGAAGAGTATACAATTTTCCCCAGAAAGCCTCTTCTACCAT
TTACAAATCATCTAaataatgacgtaatgtttcgagctccaaccctgacc
ctaactgataagatcgaaataatcaaaaatcgaaaacaTCGAAAAGgtta
aaaaggaaaaatcgaaaaagtcacttttggccatccacaaccccgaccga
aaagtGACTGAACCACCCCTTACGCATGCATGTTAATGCAGAAGTCTGAT
TTTTTAACTCTTCGGAATGGGACCTTTCTCTGACTGTAACCATCCTTTAA
TATCCCTAGACTAGATGCCTAactcccctgtctcagtaaaTAACTCATGA
AATTCTCCCTTAAAAAGTAAAACAACAACACCGAGATGGTGAAACGTCGA
GTTTCCAGCATTTATCAGAAAACACGGAAGGGATCTTTAGGTTTTCTTAA
GGTTGAAATATTGTAGAGATTTTTCTATATCATAGTCAGTTGTTAACTAT
aagaatatataaaattttgacCTCTAAAAAGTTAATATTTCCTagaataa
aatttataaaataaatcTTGTAATCTCACACCTTTTAGgtgtaataaaat
atttgaacatttttagatatgattttaagaaagaaaaatggtgttcttat
aaaacaaataaaaggaCAGACTACTTTTAATTCTTTAACTCTGTGAAGAA
GGAAAGGGATGGTTCCATACAATTAGTTTGGTATGAACCTACTCCATTAT
GTAGAATAATTAGGTTCTAATTAAGTTTTGGTGTACCAATCATCGTCATA
AAGAGATCTTGAAGGAATGATAACGATTTAGGGATAATCAAGGAACATTA
ATTTGTTCCCTCTCAATCAACTTGATATTTACCATTCATTCTATGTGATA
TCAACTGAACAGTTTGAAGCATGGGTTGGAAAACGAAAACATTGATTTTC
CTGCTACCAATAATATCGTATTATGTTTACAAATTTGttaaagaaaactt
tttgatcTTTGTTATAATCACGAGTCAGATTTACCCAAGACTTCCAATCG
AGAATTTCGCAAATTTGAATCCTGACATTGCAGATTTTGCGACAGGAGAT
GATCAAATAGTTGATGAATATGATTTTGTGGTTATCGGTGCAGGATCTGC
AGGAGCTGTTGTTGCCAATCGTTTAAGTGAAAACAAATCATGGAAAATTC
TTCTGCTCGAAGCTGGTGGTGGGGAAACAATGTTGACAGAAATGCCAGGC
GGCTTTATACACAATGTCAACTCGCCATTAGATTGGGGTTACAAGGCAGA
GCCTTCCAAGGATAAGTTAGTTTCATCTGCAATGAAAGATGGTCAGGTTT
TGTATCCCAGAGGAAAGTTACTTGGAGGATCCAGTTCTATAAACGCACTT
GTTTATGTGAGGGGTAACAAGAAAGACTACGATGATTGGGCAAAACAAGG
AAATCCAGGATGGAGTTATGACGAGGTATTACCATATTTCTTAAAATCGG
AAGATCAAACCGATGAGAGGTTGGCAATATCAAAGTATCATGCCACAGGA
GGTCCATTGAAGATTGAAACAGCAGAAGCACTCGAATTCTGGCAAAAGAT
GATGGAAGGATGCACCAAAATCTTGCCCTTCAACCCTGACCATAATGGAG
AACGACAGACTGGATGCTCTTATTTTCAGAACACAAAAGGGAATGGTCTT
CGATACAGTACATCAAAAGCTTACCTCAAACCCAAGAGATCAAATCTTCA
CGTCAGTCCATTTTCACATGTTCAGAAGCTTTTGATTGACCCTGAAACGA
AAACAGCCAAAGGTGTTCTTTATAAGAAGAATGGAAAATCCATGATAGTC
AGAGCCAAAAAGGAAGTTATCTTGTCTGCTGGAGCTGTCGCATCTCCCCA
GGTATGTTTATAACAAACGATGTCAAATATCAGAATTATAATAACATTTA
ATTCAATTAATAAATCTTGTTCCCAGATCCCACTTTGTTATTACTAATGG
ACGTGATTGCTATCAGAATCGTTGATAAGAAAACTAAGGCACTAGGTGGA
GTTTGACAAGAAATTGGATCAGTTTTCTCTCATTCCAGATCTTAATGTNT
GCTATCAGAATCATTGATAAGAAAACTAAGGCACTAGGTGGAGTTTGACA
AGAAATTAAATTTGCTTTTCTCTCATTCCAGATCTTAATGTTATCAGGAG
TTGGTCCAAAGGAGGAATTGGAAAAACATGGAATTCCGATCATCAAAGAA
CTTCAAGTTGGATACAATTTACAAGATCATGTCAGCGTCTTAACGCACTT
GGTCTTCAATGAATCAATATCGTGGCCAGTTGAaaggtaaaattttttca
atggcagcatggaggtataaagaaacaggagatcTATGCTTGCtatttca
ttgtttctgacatcagtgttagaaaatatttggactaaaaaaggcctgta
aacttggcaatctttcatcaaatgacaagatttttcgatcaatgttttct
ttcaggtaaactctattgcttgatactttcctccaaaattctccagtgac
tttatgtctacaaattgagtctgaaattatatgtgcttataaagaacttt
tcattttctggtttgagaaaatatcttttcaaaacaaaatttaacggata
acgaaattgaacataaacttgtttcacggacgaagttttatttcattttc
ttatatactgataattagaatgttcagagcaaactcgAGTTCTACTAAat
agtcttatttcatcgggcgagcttagaatttcttctaagaaatcaaaaga
tattaacgaccaattaccgacacattaaactcctgtttttctttatatac
CTCCATGATGACAGATAACTAGACAGAAAAGAAACAGTACCTGGAGATCT
TGTCTATCTTTGATAAACAAGAAAACTATTTTACTTCTAGAATCATTAAA
TACGACACCTACAAGAAATATCATGATAGCCGTGAAGGTATTCTTGGTTC
TGGAGGTGTCTTCACATCCTTTCTTCCCACAACTGAAGAATCAAAGCGAA
CCGATTACCCAGAGATGCAGATCTTTGGATTACCACACCTGGCATCAGCA
ACAGATTATAAGGATGTGTTCAATTTTGATGAGGAGTATTGGACCAATGT
TTACCAGCCTGGGTTGGAAGGACAAGAGGGATATTCTTATTTCAATTGTC
TCTTAAGACCAAAGAGCAGGTATAACACTAATCCAAGATATTACGATTTC
ATGAGAGGTTGTAATGACGGCATGTCCTCCTCCGTGGTGCTAGATGACAG
TTTTTGTCAACTCAGGTTCGATGAAAGAAATGACGCATTGTCTACTTTTT
TGAATCGCTGGTTCTTCACGCCCTTGGGGCTTCTTGTTGTATTCTTTATA
TCATTTTACATTTTGCCGAAAGATATTGCGTTATGAGCCTCAGAAGCATA
AAGATAAACTAGGCCTTTAATCATGAAATATGCCAATCATACGTTTCCtg
tgcattatcagctttttgatgcttactgatagcgctctggcgtcaatcag
taacgtaaataaagcctgggatacacggggacaaGGTTGGAAATATCCAT
CCACCTATTGGAGATGTTTGATCTCTTTTATCTCTAGAGGGCACATCAAA
TTAAGAAGCAATGACCCTGAAGACCATCCACTCATCATACCCAACTATTT
CGACAACGAAGAAGATCTTATACCTTTTGTCGAAGCTTtcaaatttggaa
agaaatttgCTGCTGCACTTGACAAGTACAATGCCACGGTTCCTGATTTG
AAAGATCCAGTTTGTGAAAAATTTGCACAAGGTAAgtgcgatgcattgtg
ggattgtttcgggagtattacaatagaattccctcgaggaattccttaga
gatttttattataatactcccgaaacaatcccacaatgcatcgcattttt
agaaaaatcaagaactccgataagatctataacGCATCACGCTTtttgaa
atcataaatcacGATATTACGCCAAATTATAAACTCCTCTCTTTTGTTAA
TTCAGACTCAGAAGATGATTACATGAAATGCATTGCAAAAAGAGGAGCCA
CCACCGGTTACCACCCAGTGGGTACATGCAAGATGGGACCCCATACTGAT
GATCAAGCAGTTGTAGATTCAAGATTGAAAGTTTATGGTATCAAAGGATT
ACGTGTTGTCGATGCATCAATCATGCCAACCATTGTCAGTGGAAATACTA
ATGCACCTACAATTATGATCGCTGAAAAAGCTGCTGATATCATTAAAGAG
GACTGGAAAAACTGATAGAAATGAACTTTGGAGAAGCTGACATCGATTTA
TGGAATCATTGACATACATAATTGTAGATGAGCGAGAGATCTTTAAATAT
ATTATTCCACTAAATGTCATTGTATAcccgggggcactcgatttcgaaac
gacggtatgtaaatctgcttttcaaaatcgtacccttacagtgcagttca
atatggctgaaaaattaccctttcagtgcattttctcatgatttacccaa
cccttatagtgcactatatttttGAGCTGTAAATATCTGCGTGAaaaaag
aagcttgg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025257-exon-sc0000529-1491911889:203338..204370 | TCONS_00025257-exon-sc0000529-1491911889:203338..204370 | Clytia hemisphaerica | exon |
| TCONS_00025257-exon-sc0000529-1510915933:203338..204370 | TCONS_00025257-exon-sc0000529-1510915933:203338..204370 | Clytia hemisphaerica | exon |
| TCONS_00025257-exon-sc0000529-1575043694:203338..204370 | TCONS_00025257-exon-sc0000529-1575043694:203338..204370 | Clytia hemisphaerica | exon |
| TCONS_00025257-exon-sc0000529-1491911889:209369..209523 | TCONS_00025257-exon-sc0000529-1491911889:209369..209523 | Clytia hemisphaerica | exon |
| TCONS_00025257-exon-sc0000529-1510915933:209369..209523 | TCONS_00025257-exon-sc0000529-1510915933:209369..209523 | Clytia hemisphaerica | exon |
| TCONS_00025257-exon-sc0000529-1575043694:209369..209523 | TCONS_00025257-exon-sc0000529-1575043694:209369..209523 | Clytia hemisphaerica | exon |
| TCONS_00025257-exon-sc0000529-1491911889:210128..210406 | TCONS_00025257-exon-sc0000529-1491911889:210128..210406 | Clytia hemisphaerica | exon |
| TCONS_00025257-exon-sc0000529-1510915933:210128..210406 | TCONS_00025257-exon-sc0000529-1510915933:210128..210406 | Clytia hemisphaerica | exon |
| TCONS_00025257-exon-sc0000529-1575043694:210128..210406 | TCONS_00025257-exon-sc0000529-1575043694:210128..210406 | Clytia hemisphaerica | exon |
| TCONS_00025257-exon-sc0000529-1491911889:210825..211018 | TCONS_00025257-exon-sc0000529-1491911889:210825..211018 | Clytia hemisphaerica | exon |
| TCONS_00025257-exon-sc0000529-1510915933:210825..211018 | TCONS_00025257-exon-sc0000529-1510915933:210825..211018 | Clytia hemisphaerica | exon |
| TCONS_00025257-exon-sc0000529-1575043694:210825..211018 | TCONS_00025257-exon-sc0000529-1575043694:210825..211018 | Clytia hemisphaerica | exon |
| TCONS_00025257-exon-sc0000529-1491911889:211249..211795 | TCONS_00025257-exon-sc0000529-1491911889:211249..211795 | Clytia hemisphaerica | exon |
| TCONS_00025257-exon-sc0000529-1510915933:211249..211795 | TCONS_00025257-exon-sc0000529-1510915933:211249..211795 | Clytia hemisphaerica | exon |
| TCONS_00025257-exon-sc0000529-1575043694:211249..211795 | TCONS_00025257-exon-sc0000529-1575043694:211249..211795 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000529 | supercontig | sc0000529:203338..211795 + |
Blast
BLAST of TCONS_00025257 vs. Swiss-Prot (Human)
Match: CHDH (Choline dehydrogenase, mitochondrial OS=Homo sapiens GN=CHDH PE=1 SV=2) HSP 1 Score: 277.33 bits (708), Expect = 1.191e-82 Identity = 214/585 (36.58%), Postives = 298/585 (50.94%), Query Frame = 2
Query: 215 FATGDDQIVDEYDFXXXXXXXXXXXXXNRLSENKSWKVLLLEAG-----GGETMLS---EIPATTVLNF-NTSIDWSFLSEPAN--DGKTSTIFKNGQLVMPRGKVLGGSSTINVMGYTRGNKRDYDLWEEQGNPGWSYEDVLPYFKKSEDQTNEKLTKDTKYHSTGGYLTIEDVE-KADVFVKLMDGFSKI-LPENKDYNGAKQSGTVFYQNTIRNGQRCSTAKAYLKP--KRSNLHVSPFSHVQKILIDPETKTAEGVVYKKNGKSMTVKAKKEVILSAGAFGSPQILMLSGVGPKEELEKHGIPIIKELQ-VGYNLQDHVSV-----LTHLVFNESISWPVERI-IKYDTYKKY-HDSREGILGSGGVFTSFLPTTEESKRTDYPEMQIFGLPHLASATDYKDVFNFDEEYWTNVYQPGLEGQEGYSYFNCLLRPKSRGHIKLRSNDPEDHPLIIPNYFDNEEDLIPFVEXXXXXXXXXXXLDKYNATVP-DLKDPVCEKFAQEDDYMKCIAKRGATTGYHPVGTCKMGPHTDDQAVVDSRLKVYGIKGLRVVDASIMPTIVSGNTNAPTIMIAEKAADIIK 1897
A+ + DEY +V++GAGSAG V+A RL+E+ + +VLLLEAG G LS +PA V N + +W + +E DG+ L PRG+V GGSS++N M Y RG+ DY+ W+ QG GW Y LPYF+K++ ++Y G L + + + ++ + P +D NG +Q G + TI G+R S A AYL P R+NL + V ++L E A GV Y KNG+S A KEVILS GA SPQ+LMLSG+G ++L+K GIP++ L VG NLQDH+ + T + S P+ ++ I + K+ + L +GG S +P++Q LP + D+ V E Y +V +R S G +KLRS +P+DHP+I PNY E D +E F+ K + A P K+ Q D + + A + YHP TCKMG +D AVVD + +V G++ LRVVDASIMP++VSGN NAPTIMIAEKAADIIK
Sbjct: 30 LASAGSESRDEYSYVVVGAGSAGCVLAGRLTEDPAERVLLLEAGPKDVLAGSKRLSWKIHMPAALVANLCDDRYNWCYHTEVQRGLDGRV--------LYWPRGRVWGGSSSLNAMVYVRGHAEDYERWQRQGARGWDYAHCLPYFRKAQGHE----LGASRYRGADGPLRVSRGKTNHPLHCAFLEATQQAGYPLTEDMNGFQQEGFGWMDMTIHEGKRWSAACAYLHPALSRTNLKAEAETLVSRVLF--EGTRAVGVEYVKNGQSHRAYASKEVILSGGAINSPQLLMLSGIGNADDLKKLGIPVVCHLPGVGQNLQDHLEIYIQQACTRPITLHSAQKPLRKVCIGLEWLWKFTGEGATAHLETGGFIRS-------QPGVPHPDIQFHFLP--SQVIDHGRVPTQQEAYQVHVGP---------------MRGTSVGWLKLRSANPQDHPVIQPNYLSTETD----IEDFRLCVKLTREIFAQEALAPFRGKELQPGSHIQSDKEIDAFVRAKADSAYHPSCTCKMGQPSDPTAVVDPQTRVLGVENLRVVDASIMPSMVSGNLNAPTIMIAEKAADIIK 572
The following BLAST results are available for this feature:
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