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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00009201-protein ID=TCONS_00009201-protein|Name=TCONS_00009201-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1251bp
MSISPIQSPPQTHQQKHSEEMLLLVRRSIEKGLVESENILDTIHSLDFWK
SIKERDPFGVRIDLSTLILVVEECVKFDENMKKVLESITFYYEVAIFLED
QTKRVISVLIDRWKVIQATKKVWSANQFNGQLQTTFQCLQDNARKNLTQL
LDCTNASSKGEYHKYLEMIGVDVTQKNSVYDYDIPKPTADQRNNQLVKDC
ENEAKKAQNTQTHGKIAGQMAVTQFATDGLIDKNFQNQQNYSQDSDILPE
ALREKHSGSKKREESIEKSHEEETIKSGLFIAPIKKLSFHKSGGSRPGKK
FVTFTQKPEGMRFKYMPSYRYISRKDLKNLSRHLTDNWIEELNETDDRAN
AVSEFRATEDLRDVEVQKLQYTYLAKLSRQFQTACIRIMTEIERKNKDGE
VTDTRRPHHEKQINKFVFLVDNSRSMTDEKLTLALKILIVLLESLKRMEY
QTAVVRFGGEDSQEPLKLFTDRMDQKRGQYILESFDCTEKTLLLDAIEFA
TTKDELFGSKMRPNEHRFLVLITDGICSQTNKTEYLRFVDRRRKDHPDFL
VLTTLPNKNERYYESNLQRSKNLLDIIAPNNWHHLNPEADFMDTIKXYES
YLQRSKNLLDIIAPNNWHHLNPEADFMDTIKDVAALIDNILRKNAKASIG
AITAQHYSSLKIPSLETDDTLKFVNKFEGNKELKIEWGKSILVSDINKPL
DIDPADEKIIEAFENFYQANKTSFESNRETPFEKESLVKKASAVTAEEND
VLVNALTDVLDTIALPNNRPTRLLQDYRGSSFSVRGYIKFVCSDGQYKKI
YENLIGSPRKDYRVTLIVDVSQSMAGMAEIGATSLLISMAAALQNVEVLF
SIMTSGSMTKLVKDFSEDWDNKTKAKLYDALTFDQDESNLSDSIFYGTQL
INEGASPKVGKTIIVLTDGYPSAPKKLQTSLQYADSMGVQTIAIGVGYFT
EGIFKYFPNFILADDPLLLPGAMQSFYLGEPQLEGITNVAGRIVAEKVLY
NDKQLESMDDAWKMDIERVYAEEVDKTKKELRLVIYNAIQSSIQLKIKLC
FVLDTTGSMTPYIEMAKDKIKQITENIKAHIADNCGKNTDLQVGFVAYKV
RGTNGHLEKIPFTSDLQALQDFVNLQHADGGRGDEDKEDGILTALDFDWD
GEAKFLVLIGDVPDYGTVGTMDQTIRRIAQQNIYILYVTIKPHRTNKECA
RLRGVYRSTVDSKINTKGFMEISMSAIGNDTNQLSEKIVDTVNTVINNEF
M Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0019031 | viral envelope |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005198 | structural molecule activity |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0019031 |
viral envelope |
| molecular_function |
GO:0005198 |
structural molecule activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | COILS | Coil | Coil | coord: 1063..1083 |
| None | No IPR available | CDD | cd00198 | vWFA | coord: 417..564
e-value: 8.31378E-10
score: 57.1906 |
| None | No IPR available | CDD | cd00198 | vWFA | coord: 812..947
e-value: 8.79059E-11
score: 60.2722 |
| None | No IPR available | CDD | cd00198 | vWFA | coord: 1049..1202
e-value: 6.24409E-7
score: 48.331 |
| IPR002035 | von Willebrand factor, type A | SMART | SM00327 | VWA_4 | coord: 412..597
e-value: 6.5E-5
score: 32.3
coord: 1046..1227
e-value: 1.1
score: 3.6
coord: 811..978
e-value: 8.6E-4
score: 28.6 |
| IPR002035 | von Willebrand factor, type A | GENE3D | 3.40.50.410 | | coord: 1044..1249
e-value: 9.0E-17
score: 61.1 |
| IPR002035 | von Willebrand factor, type A | GENE3D | 3.40.50.410 | | coord: 405..764
e-value: 7.5E-11
score: 41.8 |
| IPR002035 | von Willebrand factor, type A | PFAM | PF00092 | VWA | coord: 814..947
e-value: 1.6E-8
score: 34.9
coord: 417..543
e-value: 1.9E-8
score: 34.7 |
| IPR002035 | von Willebrand factor, type A | GENE3D | 3.40.50.410 | | coord: 805..1028
e-value: 1.0E-14
score: 54.3 |
| IPR002035 | von Willebrand factor, type A | PROSITE | PS50234 | VWFA | coord: 415..612
score: 11.591 |
| IPR002035 | von Willebrand factor, type A | PROSITE | PS50234 | VWFA | coord: 813..993
score: 9.883 |
| IPR002035 | von Willebrand factor, type A | SUPERFAMILY | 53300 | vWA-like | coord: 812..950 |
| IPR002035 | von Willebrand factor, type A | SUPERFAMILY | 53300 | vWA-like | coord: 416..544 |
| IPR002035 | von Willebrand factor, type A | SUPERFAMILY | 53300 | vWA-like | coord: 1047..1194 |
| IPR009397 | Vesiculovirus matrix | GENE3D | 3.10.460.10 | | coord: 109..180
e-value: 3.3E-4
score: 19.4 |
Blast
The following BLAST results are available for this feature:
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