TCONS_00013774-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00013774-protein
Unique NameTCONS_00013774-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length605

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00013774-protein ID=TCONS_00013774-protein|Name=TCONS_00013774-protein|organism=Clytia hemisphaerica|type=polypeptide|length=605bp
MLRIIPEVVIRLSRPVFVSKTLLPLRALNRGFSLKSPILIHYLEKPSLKF
YSILAGADMAPIYTSDKNGNDETGDGSEAKPFKTVLRAMHHVGAEPFPQI
MVDTKDPEKAGFDIIAKAQLKKMTKLFGQEKRKMENQKKQEAEKAAQHEK
NLEEAKKITIEEDKSLPAAKKIKLRVAKDHRDQRIKVYGWVHRLRQQGKN
LMFIVLRDGTGFLQCVLADKLCQTYNAVRLTTESSVCLYGTLQAVPEGKS
APGGHELIVDYWEVVGFAPPGGADLVVNETSSVDTLLDQRHLALRGEFLS
KIMRVRSRVTQCFRDHYFARGYTEMCPPTMVQTQCEGGSTLFKFDYFGEP
AYLTQSSQLYLETACPAVGDVFCVAQSYRAETSRTRRHLAEYTHIEGECP
FIDFEELLNNIEDLVCDVVDRFLKSPEGELMKDLNPDFKAPKRPFKRMDY
AEAIEWLRKDGFKKDDGTFYEFGEDIPEMPERRMTDVIGEPILLTRFPAD
VKAFYMRKDQNNPKVVEAVDVLMPGVGEILGGSMRMDDEAELMEAFAKQK
LNPAPYYWYTDQRKYGTCPHGGYGLGLDRFVTWLTNRYHIRDVCFYPRFI
GRCTP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_007691XLOC_007691Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00013774TCONS_00013774Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002312Asp/Asn-tRNA-synth_IIb
IPR004522Asn-tRNA-ligase
IPR004364aa-tRNA-synt_II
IPR004365NA-bd_OB_tRNA
IPR006195aa-tRNA-synth_II
IPR012340NA-bd_OB-fold
Vocabulary: Biological Process
TermDefinition
GO:0006418tRNA aminoacylation for protein translation
GO:0006421asparaginyl-tRNA aminoacylation
Vocabulary: Molecular Function
TermDefinition
GO:0004812aminoacyl-tRNA ligase activity
GO:0000166nucleotide binding
GO:0005524ATP binding
GO:0004816asparagine-tRNA ligase activity
GO:0003676nucleic acid binding
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006421 asparaginyl-tRNA aminoacylation
biological_process GO:0006418 tRNA aminoacylation for protein translation
cellular_component GO:0005737 cytoplasm
molecular_function GO:0004812 aminoacyl-tRNA ligase activity
molecular_function GO:0004816 asparagine-tRNA ligase activity
molecular_function GO:0005524 ATP binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0000166 nucleotide binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 120..158
NoneNo IPR availableGENE3D3.30.930.10coord: 275..605
e-value: 4.2E-87
score: 292.0
NoneNo IPR availableGENE3D2.40.50.140coord: 128..270
e-value: 4.8E-25
score: 87.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 131..150
NoneNo IPR availableCDDcd04323AsnRS_cyto_like_Ncoord: 184..266
e-value: 7.76121E-40
score: 139.292
NoneNo IPR availableCDDcd00776AsxRS_corecoord: 282..601
e-value: 8.09847E-142
score: 416.582
NoneNo IPR availableSUPERFAMILY55681Class II aaRS and biotin synthetasescoord: 282..599
IPR002312Aspartyl/Asparaginyl-tRNA synthetase, class IIbPRINTSPR01042TRNASYNTHASPcoord: 353..365
score: 46.68
coord: 520..536
score: 42.78
coord: 560..574
score: 48.33
coord: 369..382
score: 32.47
IPR004522Asparagine-tRNA ligaseTIGRFAMTIGR00457TIGR00457coord: 174..604
e-value: 2.5E-119
score: 397.0
IPR004364Aminoacyl-tRNA synthetase, class II (D/K/N)PFAMPF00152tRNA-synt_2coord: 283..598
e-value: 1.6E-98
score: 329.6
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-typePFAMPF01336tRNA_anti-codoncoord: 186..264
e-value: 3.7E-10
score: 39.5
IPR006195Aminoacyl-tRNA synthetase, class IIPROSITEPS50862AA_TRNA_LIGASE_IIcoord: 303..597
score: 14.786
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 150..269

Blast
[Close]
BLAST of TCONS_00013774-protein vs. Swiss-Prot (Human)
Match: SYNC (Asparagine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=NARS PE=1 SV=1)

HSP 1 Score: 773.081 bits (1995), Expect = 0.000e+0
Identity = 349/547 (63.80%), Postives = 446/547 (81.54%), Query Frame = 0 
Query:   59 MAPIYTSDKNGNDETGDGSEAKPFKTVLRAMHHVGAEPFPQIMVDTKDPEKAGFDIIAKAQLKKMTKLFGQEKRKMENQKKQEAEKAAQHEKNLEEAKKITIEEDKSLPAAKKIKLRVAKDHRDQRIKVYGWVHRLRQQGKNLMFIVLRDGTGFLQCVLADKLCQTYNAVRLTTESSVCLYGTLQAVPEGKSAPGGHELIVDYWEVVGFAPPGGADLVVNETSSVDTLLDQRHLALRGEFLSKIMRVRSRVTQCFRDHYFARGYTEMCPPTMVQTQCEGGSTLFKFDYFGEPAYLTQSSQLYLETACPAVGDVFCVAQSYRAETSRTRRHLAEYTHIEGECPFIDFEELLNNIEDLVCDVVDRFLKSPEGELMKDLNPDFKAPKRPFKRMDYAEAIEWLRKDGFKKDDGTFYEFGEDIPEMPERRMTDVIGEPILLTRFPADVKAFYMRKDQNNPKVVEAVDVLMPGVGEILGGSMRMDDEAELMEAFAKQKLNPAPYYWYTDQRKYGTCPHGGYGLGLDRFVTWLTNRYHIRDVCFYPRFIGRCTP 605
            +A +Y SD+ G+D TGDG++ KPFKT L+A+  VG EPFP I VD++  E   +++I+K+QLK + K++ +E+ K E+++K+EAE + + EKNLEEAKKITI+ D SLP  K +K+   + +R QR+KV+GWVHRLR+QGKNLMF+VLRDGTG+LQCVLAD+LCQ YN V L+TESSV +YG L   P+GK APGGHEL  D+WE++G AP GGAD ++NE S VD  L+ RH+ +RGE +SKI++ RS VT+CFRDH+F RGY E+ PPT+VQTQ EGG+TLFK DYFGE A+LTQSSQLYLET  PA+GDVFC+AQSYRAE SRTRRHLAEYTH+E ECPF+ F++LLN +EDLVCDVVDR LKSP G ++ +LNP+F+ PKRPFKRM+Y++AI WL++   KK+DGTFYEFGEDIPE PER MTD I EPILL RFP ++K+FYM++   + ++ E+VDVLMP VGEI+GGSMR+ D  E++  + ++ ++P PYYWYTDQRKYGTCPHGGYGLGL+RF+TW+ NRYHIRDVC YPRF+ RCTP
Sbjct:    3 LAELYVSDREGSDATGDGTKEKPFKTGLKALMTVGKEPFPTIYVDSQK-ENERWNVISKSQLKNIKKMWHREQMKSESREKKEAEDSLRREKNLEEAKKITIKNDPSLPEPKCVKIGALEGYRGQRVKVFGWVHRLRRQGKNLMFLVLRDGTGYLQCVLADELCQCYNGVLLSTESSVAVYGMLNLTPKGKQAPGGHELSCDFWELIGLAPAGGADNLINEESDVDVQLNNRHMMIRGENMSKILKARSMVTRCFRDHFFDRGYYEVTPPTLVQTQVEGGATLFKLDYFGEEAFLTQSSQLYLETCLPALGDVFCIAQSYRAEQSRTRRHLAEYTHVEAECPFLTFDDLLNRLEDLVCDVVDRILKSPAGSIVHELNPNFQPPKRPFKRMNYSDAIVWLKEHDVKKEDGTFYEFGEDIPEAPERLMTDTINEPILLCRFPVEIKSFYMQRCPEDSRLTESVDVLMPNVGEIVGGSMRIFDSEEILAGYKREGIDPTPYYWYTDQRKYGTCPHGGYGLGLERFLTWILNRYHIRDVCLYPRFVQRCTP 548
The following BLAST results are available for this feature:
BLAST of TCONS_00013774-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SYNC0.000e+063.80Asparagine--tRNA ligase, cytoplasmic OS=Homo sapie... [more]
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