TCONS_00016968-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00016968-protein
Unique NameTCONS_00016968-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length555

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00016968-protein ID=TCONS_00016968-protein|Name=TCONS_00016968-protein|organism=Clytia hemisphaerica|type=polypeptide|length=555bp
MPGIISYFQFSTIHILTHMVILWSADTTQSYQYLAQQWNENEIKVPPPLL
TTSRTKRSLGLNYTDVLKSKNGKKGKDADLSKYKKQTEVARHGRPQSKLD
EKPFEIKKNYMFLKVTVAECVYAHNQVRRKHGLPNLLWDPELSYNAEEWA
LILASRSAGLIHSKQPSNRNGIYYGENLFYGMGSVYGHNCSEAVYAWYSE
IRNFEWSNPRYSSAIGHFYQLVYKDTKYFGVGIACAENVEESFIVARYLE
GSQSSKIAETPEPLADSPEITIPSLTIQPTPEPIVERLFISDEGGWSEWV
PVTKCSTTCGRGQYLERRYCIDVTAGTEEPKTCGEGDRYRVAECAKQLPC
PMDQDPNEKDGECNDLFPDKCQSSVVPLGGRMECRQENNGTFMTNNCKKT
CMFCKPCVNYHKDCPAYSVPPYSYCTDNEYSPWMEWKCPKSCAYCNMNQT
VYEETDCYDLTYDCTKWAFELNYCRSDEYAEFMSGACKESCSFCTACHDA
NPYCQQLKEDYHYCTSKDQGINLWMAGSCAGTCNYCFDPKNFETNIDKVN
GTRPP
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_009499XLOC_009499Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00016968TCONS_00016968Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014044CAP_domain
IPR003582ShKT_dom
IPR000884TSP1_rpt
IPR034113SCP_GAPR1-like
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014044CAP domainSMARTSM00198SCP_3coord: 115..251
e-value: 1.5E-10
score: 51.1
IPR014044CAP domainGENE3D3.40.33.10coord: 111..257
e-value: 3.4E-26
score: 91.7
IPR014044CAP domainPFAMPF00188CAPcoord: 121..243
e-value: 1.1E-18
score: 68.2
IPR014044CAP domainSUPERFAMILY55797PR-1-likecoord: 116..249
IPR003582ShKT domainSMARTSM00254ShkT_1coord: 496..537
e-value: 8.5
score: 10.9
coord: 456..495
e-value: 4.6
score: 13.9
coord: 406..446
e-value: 3.1
score: 15.8
coord: 362..405
e-value: 16.0
score: 7.8
IPR003582ShKT domainPFAMPF01549ShKcoord: 406..445
e-value: 1.4E-5
score: 25.4
coord: 383..404
e-value: 24.0
score: 5.5
coord: 457..494
e-value: 0.0047
score: 17.3
coord: 497..536
e-value: 0.14
score: 12.6
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 407..445
score: 6.547
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 363..404
score: 7.05
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 457..494
score: 8.103
IPR003582ShKT domainPROSITEPS51670SHKTcoord: 497..536
score: 6.752
IPR000884Thrombospondin type-1 (TSP1) repeatSMARTSM00209TSP1_2coord: 296..351
e-value: 6.2E-4
score: 29.1
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 290..351
e-value: 2.4E-6
score: 27.4
IPR000884Thrombospondin type-1 (TSP1) repeatPROSITEPS50092TSP1coord: 293..351
score: 9.147
IPR034113Golgi-associated plant pathogenesis-related protein 1, SCP domainCDDcd05382SCP_GAPR-1_likecoord: 119..248
e-value: 1.70365E-39
score: 139.653

Blast
[Close]
BLAST of TCONS_00016968-protein vs. Swiss-Prot (Human)
Match: GAPR1 (Golgi-associated plant pathogenesis-related protein 1 OS=Homo sapiens GN=GLIPR2 PE=1 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 8.082e-18
Identity = 51/131 (38.93%), Postives = 73/131 (55.73%), Query Frame = 0 
Query:  119 ECVYAHNQVRRKHGLPNLLWDPELSYNAEEWALILASRSAGLIHSKQPSNRNGIYYGENLFYGMGSVYGHNCSEAVYAWYSEIRNFEWSNPRYSSAIGHFYQLVYKDTKYFGVGIACAENVEESFIVARYL 249
            E + AHN+ R+KHG+P L     L+  A++++  LAS    L HS + S       GENL +   + Y     E    WYSEI+N+ +  P ++S  GHF  +V+K+TK  GVG A A +   SF+VARY 
Sbjct:   12 EVLKAHNEYRQKHGVPPLKLCKNLNREAQQYSEALASTRI-LKHSPESSRGQ---CGENLAW---ASYDQTGKEVADRWYSEIKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKASASD-GSSFVVARYF 134
The following BLAST results are available for this feature:
BLAST of TCONS_00016968-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GAPR18.082e-1838.93Golgi-associated plant pathogenesis-related protei... [more]
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