TCONS_00019028-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00019028-protein
Unique NameTCONS_00019028-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length511

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00019028-protein ID=TCONS_00019028-protein|Name=TCONS_00019028-protein|organism=Clytia hemisphaerica|type=polypeptide|length=511bp
MVFQQRRWIVFLLVILGLISLCHGKRELSPSLSMVYGPGLNLEVVLPVRY
FYVQAVDTKGKNYTRSIGNKALTVKIQADRQPRVWKDVLDRNDGSYIVRM
RFYETYKNVEISVMYNGKHVAKSPYKLKGLLYHERCDCPENDEQRWLSEM
KCPQSYAQISRDLSPFPQIDLTKMKEDAIREFGTHHALCHYSVVHNKVYR
KCYGQHVGFSIFMDAWLFSLIRKVKLPDLEFFSNLGDWPLSERKKPPIPI
LSWCGSDETFDIVMPTYDLTESALEALGRVSLDMLSVQGNTGPKWKGKIE
KGFFRGRDSRQERLDLTVMGREKTGLFDVGMTNFFFFEYDEKKYGPKNQH
VSFFDFFKYKYQLNIDGTVAAYRFPYLLAGDSVVFKQDSHYYEHFYHDLQ
SMVHYIPFKRDLSDLEEKIKWAKSHDKEARKIAMAGQTYARDHLMTDQLF
CYSFTLFKELSSRYVQRPKVHVEQEHIEMPGEQEGKCQCDRKKKKKKSKK
KWKSEMDHTEL
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_010666XLOC_010666Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00019028TCONS_00019028Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001298Filamin/ABP280_rpt
IPR006598LipoPS_modifying
IPR013783Ig-like_fold
IPR017868Filamin/ABP280_repeat-like
IPR014756Ig_E-set
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001298Filamin/ABP280 repeatSMARTSM00557flmn_3coord: 29..132
e-value: 3.9E-7
score: 39.7
IPR006598Lipopolysaccharide-modifying proteinSMARTSM00672cap10coord: 225..463
e-value: 2.4E-70
score: 249.7
IPR006598Lipopolysaccharide-modifying proteinPFAMPF05686Glyco_transf_90coord: 149..490
e-value: 1.2E-93
score: 314.1
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 26..128
e-value: 1.4E-16
score: 60.2
IPR017868Filamin/ABP280 repeat-likePFAMPF00630Filamincoord: 29..126
e-value: 9.5E-13
score: 48.8
IPR017868Filamin/ABP280 repeat-likePROSITEPS50194FILAMIN_REPEATcoord: 25..129
score: 12.116
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 476..511
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 28..127

Blast
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BLAST of TCONS_00019028-protein vs. Swiss-Prot (Human)
Match: KDEL1 (KDEL motif-containing protein 1 OS=Homo sapiens GN=KDELC1 PE=1 SV=1)

HSP 1 Score: 570.852 bits (1470), Expect = 0.000e+0
Identity = 274/490 (55.92%), Postives = 346/490 (70.61%), Query Frame = 0 
Query:   11 FLLVILGLISLCHGKRELSPSLSMVYGPGLNLEVVLPVRYFYVQAVDTKGKNYTRSIGNKALTVKIQADRQ--PRVWKDVLDRNDGSYIVRMRFYETYKNVEISVMYNGKHVAKSPYKLKGLLYHERCDCPENDEQRWLSEMKCPQSYAQISRDLSPFPQIDLTKMKEDAIREFGTHHALCHYSVVHNKVYRKCYGQHVGFSIFMDAWLFSLIRKVKLPDLEFFSNLGDWPLSERKKPPI--PILSWCGSDETFDIVMPTYDLTESALEALGRVSLDMLSVQGNTGPKWKGKIEKGFFRGRDSRQERLDLTVMGREKTGLFDVGMTNFFFFEYDEKKYGPKNQHVSFFDFFKYKYQLNIDGTVAAYRFPYLLAGDSVVFKQDSHYYEHFYHDLQSMVHYIPFKRDLSDLEEKIKWAKSHDKEARKIAMAGQTYARDHLMTDQLFCYSFTLFKELSSRYVQRPKVHVEQEHIEMPGEQE-GKCQCDRKKKK 495
            F L  +  ++   G+R+LSP  S ++GPGL  +VVLP RYFY+QAVDT G  +T S G K   VK+ A  +   RV   VLDR DGS+IVR R Y +YKN+++ + + G+HVAKSPY LKG +YHE CDCP  D   WL EM CP++ AQI RDL+ FP +D  K+  +  + FG   +LCHY++  NKVY K +G+HVGF IFMDA L SL RKVK+PD+E F NLGDWPL ++K      PI SWCGS ++ DIVMPTYDLT+S LE +GRVSLDM+SVQ NTGP W+ K     +RGRDSR+ERL+L  + R+   L D   TNFFFF++DE  YGP  +H+SFFDFFK+KYQ+NIDGTVAAYR PYLL GDSVV KQDS YYEHFY++LQ   HYIP K +LSDL EK+KWAK HD+EA+KIA AGQ +AR++LM D +FCY F LF+E ++  V  P++    + +E   E +   C C RKK K
Sbjct:   10 FFLATVPALAETGGERQLSPEKSEIWGPGLKADVVLPARYFYIQAVDTSGNKFTSSPGEKVFQVKVSAPEEQFTRVGVQVLDRKDGSFIVRYRMYASYKNLKVEIKFQGQHVAKSPYILKGPVYHENCDCPLQDSAAWLREMNCPETIAQIQRDLAHFPAVDPEKIAVEIPKRFGQRQSLCHYTLKDNKVYIKTHGEHVGFRIFMDAILLSLTRKVKMPDVELFVNLGDWPLEKKKSNSNIHPIFSWCGSTDSKDIVMPTYDLTDSVLETMGRVSLDMMSVQANTGPPWESKNSTAVWRGRDSRKERLELVKLSRKHPELIDAAFTNFFFFKHDENLYGPIVKHISFFDFFKHKYQINIDGTVAAYRLPYLLVGDSVVLKQDSIYYEHFYNELQPWKHYIPVKSNLSDLLEKLKWAKDHDEEAKKIAKAGQEFARNNLMGDDIFCYYFKLFQEYANLQVSEPQIREGMKRVEPQTEDDLFPCTCHRKKTK 499
The following BLAST results are available for this feature:
BLAST of TCONS_00019028-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KDEL10.000e+055.92KDEL motif-containing protein 1 OS=Homo sapiens GN... [more]
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