TCONS_00020502-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00020502-protein
Unique NameTCONS_00020502-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length883

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00020502-protein ID=TCONS_00020502-protein|Name=TCONS_00020502-protein|organism=Clytia hemisphaerica|type=polypeptide|length=883bp
MSSKSKTKKSTSFDLSKTSPVHVRYAKKKQTNHLTPSSNLKKPEKPKKKS
KVTKSKRPFIPAPGKTSPGKPYQWESKSHRLEINPPPLSSTRSRTMHMDE
LSTTTEDDYVRGERYPQSAHYPTPDARYATPVERSYTPGERYEHKIDRLL
KDVSINEREYLKSKTADQLNASRRLIEDQEKELQVSLNEREYLKSKAKDQ
LNASRKLIEDQEQELQSYKTNLDTSLHDRSKLERSYELVKKEAENSKNEA
FMLGQEKNTLLRRLNDVEHEGKEASQELDKLRKTCRKLKHDRKFTEVDIK
ALSSQRDMLLDKLDEFDVTNKNLRRLIKEAHKKQVSEDELTDRCNILIKK
LTNAESTIQNQSAQLVDQDKQIDTLIAKIETDKQQGKIYDDLQKTMEATR
EHLQTELTQKSVECERLQQAFEKSQRDSSACTAEVEHYQSVLAVTRDKSV
RDKEALKKATRIQRERADKSEDSNEKLQKQMSDLLIELDHSKRTLIDLTD
AHKKLKKDNEYLEDESKILRKNIFDIGDTLELSPKTMKAGPVPVVEKLTS
KVRQLKCVKTENERLKEEIRSIEENFHSTDQDYTFKLRTAETEITKLRAA
LDQFETLATEYKSQLDHYRNECNDLHNRLRQQDEQMNSKLKESMHEVNDV
RTSLRSKILELEPYPAMLKASEDRLRETQERANTAEKKNTEQNIVIVELT
QKVEMLTEQMDHLREKYRSKHDESKHLEQQITAMERQMQSVDGSQRELIQ
SLSRKDENLAVLQERFESQRIENERLVHQLEVALNDAKKQVETQKDKAVA
KERSAQARIMDLEAQLSRSTQNTQQLKRTKDEAERKFNSRLQDMRDRLEQ
ANSTTRSMQNYVQFLKSTYANVFTDEIDSAHKY
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_011510XLOC_011510Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00020502TCONS_00020502Clytia hemisphaericatranscript
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 162..249
NoneNo IPR availableCOILSCoilCoilcoord: 759..854
NoneNo IPR availableCOILSCoilCoilcoord: 257..291
NoneNo IPR availableCOILSCoilCoilcoord: 668..688
NoneNo IPR availableCOILSCoilCoilcoord: 400..420
NoneNo IPR availableCOILSCoilCoilcoord: 313..333
NoneNo IPR availableCOILSCoilCoilcoord: 696..737
NoneNo IPR availableCOILSCoilCoilcoord: 587..642
NoneNo IPR availableCOILSCoilCoilcoord: 467..522
NoneNo IPR availableCOILSCoilCoilcoord: 351..371
NoneNo IPR availableCOILSCoilCoilcoord: 548..582
NoneNo IPR availableGENE3D1.20.120.330coord: 542..678
e-value: 5.1E-5
score: 22.4
NoneNo IPR availableGENE3D1.20.5.340coord: 679..775
e-value: 0.0021
score: 17.3
coord: 229..336
e-value: 0.0033
score: 16.7
coord: 776..873
e-value: 0.086
score: 12.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 816..835
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..97

Blast
[Close]
BLAST of TCONS_00020502-protein vs. Swiss-Prot (Human)
Match: ODFP2 (Outer dense fiber protein 2 OS=Homo sapiens GN=ODF2 PE=1 SV=1)

HSP 1 Score: 335.109 bits (858), Expect = 1.033e-101
Identity = 270/831 (32.49%), Postives = 453/831 (54.51%), Query Frame = 0 
Query:   48 KKSKVTKSKRPFIPAPGKTSPGKPY--QWESKSHRLEINPPPLSSTRSRTMHMDELSTTTEDDYVRGERYPQSAHYPTPDARYATPVERSYTPGERYEHKIDRLLKDVSINEREYLKSKTADQLNASRRLIEDQEKELQVSLNEREYLKSKAKDQLNASRKLIEDQEQELQSYKTNLDTSLHDRSKLERSYELVKKEAENSKNEAFMLGQEKNTLLRRLNDVEHEGKEASQELDKLRKTCRKLKHDRKFTEVDIKALSSQRDMLLDKLDEFDVTNKNLRRLIKEAHKKQVSEDELTDRCNILIKKLTNAESTIQNQSAQLVDQDKQIDTLIAKIETDKQQGKIYDDLQKTMEATREHLQTELTQKSVECERLQQAFEKSQRDSSACTAEVEHYQSVLAVTRDKSVRDKEALKKATRIQRERADKSEDSNEKLQKQMSDLLIELDHSKRTLIDLTDAHKKLKKDNEYLEDESKILRKNIFDIGDTLELSPKTMKAGPVPVVEKLTSKVRQLKCVKTENERLKEEIRSIEENFHSTDQDYTFKLRTAETEITKLRAALDQFETLATEYKSQLDHYRNECNDLHNRLRQQDEQMNSKLKESMH-EVNDVRTSLRSKILELEPYPAMLKASEDRLRETQERANTAEKKNTEQNIVIVELTQKVEMLTEQMDHLREKYRSKHDESKHLEQQITAMERQMQSVDGSQRELIQSLSRKDENLAVLQERFESQRIENERLVHQLEVALNDAKKQVETQKDKAVAKERSAQARIMDLEAQLSRSTQNTQQLKRTKDEAERKFNSRLQDMRDRLEQANSTTRSMQNYVQFLKSTYANVFTD 875
            ++S   K+K P++P PGK+S  +P   +WE+  H LEI PP  S      M + +LS  TEDD         S H                    RY+ KID L+  V       LKS+           ++ Q+ E Q++   + +L+ + ++    + +L E +               H+ + L  + E +K+E + +  +   L QEK  L+ +L + E +G  A++++  L+ T  KLK +++ T  DI  L+ Q+++LL KL  F+ TN+ LR L++E H K+ SE  L ++   L+K+L  A+S        L D+DK+++ L+ +I+ +K Q K   +L K+ME+ R HLQ +L  K  E  RL    +  +R  +   AEVE     L   + K  RDKE+LKKA R Q+ERA+KSE+  E+L  Q++D  + +  +  TL      + ++ K+   LE E  +L   + D+ +  +   + M+     +VE+L  +  +    K ENERLK     +E+           KL  A  E+ +L+A++  +E +   YKSQ+   R E +++  +L + D++ N  LK+ M+ E+   R   +S++ +L+  P +LK +E +L E Q++    E+KN +   +I +L  ++E   ++++  REK+++   E+K L  ++  +ER++++      E +Q +++++E +   Q R E +  E   L  QLE A+ DA++QVE  K+ A++KER+AQ +I+DLE QLSR+     QL+R++D+A+R++ SRLQD++DRLEQ+ ST RSMQNYVQFLKS+YANVF D
Sbjct:   56 RRSVRVKTKVPWMP-PGKSS-ARPVGCKWENPPHCLEITPPS-SEKLVSVMRLSDLS--TEDD--------DSGHCKM----------------NRYDKKIDSLMNAVGC-----LKSE-----------VKMQKGERQMA---KRFLEERKEELEEVAHELAETE---------------HENTVLRHNIERMKEEKDFTILQKKHLQQEKECLMSKLVEAEMDGAAAAKQVMALKDTIGKLKTEKQMTCTDINTLTRQKELLLQKLSTFEETNRTLRDLLREQHCKEDSE-RLMEQQGALLKRLAEADSEKARLLLLLQDKDKEVEELLQEIQCEKAQAKTASELSKSMESMRGHLQAQLRSKEAENSRLCMQIKNLERSGNQHKAEVEAIMEQLKELKQKGDRDKESLKKAIRAQKERAEKSEEYAEQLHVQLADKDLYVAEALSTLESWRSRYNQVVKEKGDLELEIIVLNDRVTDLVNQQQTLEEKMREDRDSLVERLHRQTAEYSAFKLENERLKASFAPMED-----------KLNQAHLEVQQLKASVKNYEGMIDNYKSQVMKTRLEADEVAAQLERCDKE-NKILKDEMNKEIEAARRQFQSQLADLQQLPDILKITEAKLAECQDQLQGYERKNIDLTAIISDLRSRIEHQGDKLEMAREKHQASQKENKQLSLKVDELERKLEATSAQNIEFLQVIAKREEAIHQSQLRLEEKTRECGTLARQLESAIEDARRQVEQTKEHALSKERAAQNKILDLETQLSRTKTELSQLRRSRDDADRRYQSRLQDLKDRLEQSESTNRSMQNYVQFLKSSYANVFGD 810
The following BLAST results are available for this feature:
BLAST of TCONS_00020502-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ODFP21.033e-10132.49Outer dense fiber protein 2 OS=Homo sapiens GN=ODF... [more]
back to top