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Sequence
The following sequences are available for this feature:
polypeptide sequence >TCONS_00021163-protein ID=TCONS_00021163-protein|Name=TCONS_00021163-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1094bp
MGKFAILLNLVICFVVFQKVSSKKVTICRGKEQSLVCQEGTGSLLINSAV
LLRESRTECGDLSSWFIWCPKQAVSERVKEICNGNKHCTLMNDRSFLRSN
QIEDECDSIDTRYLEIDYQCSGEPTIPPTTVPPEENNITMIPIAKKSQTI
CELDHGEIMCPGTTKINITSVFWGRRENEEICQSNYYTDKETSIKKCDFN
NEEKKADLFQSMQKQCNNESKCQFFIPKWYLGNPCPESEVAKYLDINYDC
MTDDGKVTTHSWSSTPVSTSSTHPFSRYTTTVTTQKRSSQTRTLTTRTTP
TMTTTSTATSTTTPTTSTTKTIPTTTTTQTNPIPTTTTTTTTPTTTTTAP
TTTSTTPTTTTTTTTTTPTTTTTTTTPTTTTTTPTTTTTSTTPTTTMTTT
TPTTTTTTTTPTTTTTSTPPTTTMTTTTPTTTTTTTTPTTTTTTTPPTTT
TTTPTTTTTSTTPITTRTTTTPTTTSTTPTMTTTTTTPTTITTTTTPTTT
TTLTTPTTTMTTTTPTTTTTSTTPTTTRTTTTPTKTTTTTTPTTATTSPT
TTSTTTTTLTTPTTTTTTTAPVSTTTTTTAKRTTNPPAITTQSPTRPPDF
NQVCDQDTREITCYDNQVIQIGHAFYGHDPVKQNNCSVSQEKAQCGHDVT
AQLNLICGGSRGCQVSALTDRFPATGCGVDVKPYVSFSYVCVNNTNKAAQ
PTKMTIPSPGPSAQVLTKNLSAGKGSFIGCFTEGTVIYVKSAWFGNKTLN
CGKDVLKTVKYDCGGGTFCSLSADAGKYGRTDCSTSAELKLSMEYQCTPK
PPGTIPPIPQPLVNTPTHSRNVPAVNINDAAQCGRQMRVRQRRVIQPAEA
KAGRWPWQVEIYTSANNHICGGAMITNRWLLTAAHCIDKSNVATASEKYF
VVLGEFNRSRNEGHEFKYNIQRVILHPGYDPQTLNAIQHDKDIALMQLDQ
NVELTSYIGTVCVPNTQNIDYWDNCVLTGWGKPTYPGSSAYVLQQGLLNV
VTNQECQRKLKEDSVGEPGDEITSNMICGDDKTKSGVSGCQGDSGGPFVC
RRKSDNKWYLRGLVSWGSQRCEIKEMYQVLTRVSSFYQWITNNI Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
This polypeptide derives from the following transcript feature(s):
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004252 | serine-type endopeptidase activity |
| GO:0030246 | carbohydrate binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006508 | proteolysis |
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006508 |
proteolysis |
| molecular_function |
GO:0030246 |
carbohydrate binding |
| molecular_function |
GO:0004252 |
serine-type endopeptidase activity |
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| IPR001314 | Peptidase S1A, chymotrypsin family | PRINTS | PR00722 | CHYMOTRYPSIN | coord: 871..886
score: 53.71
coord: 1037..1049
score: 60.34
coord: 938..952
score: 33.27 |
| IPR001254 | Serine proteases, trypsin domain | SMART | SM00020 | trypsin_2 | coord: 843..1090
e-value: 1.1E-70
score: 250.8 |
| IPR001254 | Serine proteases, trypsin domain | PFAM | PF00089 | Trypsin | coord: 848..1090
e-value: 2.7E-59
score: 200.5 |
| IPR001254 | Serine proteases, trypsin domain | PROSITE | PS50240 | TRYPSIN_DOM | coord: 844..1094
score: 32.731 |
| IPR001254 | Serine proteases, trypsin domain | CDD | cd00190 | Tryp_SPc | coord: 849..1093
e-value: 3.07117E-73
score: 241.797 |
| IPR000922 | D-galactoside/L-rhamnose binding SUEL lectin domain | PFAM | PF02140 | Gal_Lectin | coord: 611..691
e-value: 4.8E-7
score: 30.0
coord: 159..250
e-value: 5.0E-10
score: 39.6 |
| IPR000922 | D-galactoside/L-rhamnose binding SUEL lectin domain | PROSITE | PS50228 | SUEL_LECTIN | coord: 150..251
score: 8.991 |
| None | No IPR available | GENE3D | 2.40.10.10 | | coord: 844..875
e-value: 2.5E-15
score: 55.9 |
| None | No IPR available | GENE3D | 2.40.10.10 | | coord: 961..1094
e-value: 1.3E-35
score: 122.1 |
| None | No IPR available | GENE3D | 2.40.10.10 | | coord: 876..960
e-value: 5.7E-27
score: 93.4 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 261..600 |
| IPR018114 | Serine proteases, trypsin family, histidine active site | PROSITE | PS00134 | TRYPSIN_HIS | coord: 881..886 |
| IPR033116 | Serine proteases, trypsin family, serine active site | PROSITE | PS00135 | TRYPSIN_SER | coord: 1038..1049 |
| IPR009003 | Peptidase S1, PA clan | SUPERFAMILY | 50494 | Trypsin-like serine proteases | coord: 825..1094 |
Blast
BLAST of TCONS_00021163-protein vs. Swiss-Prot (Human)
Match: CTRL (Chymotrypsin-like protease CTRL-1 OS=Homo sapiens GN=CTRL PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 4.397e-41 Identity = 95/256 (37.11%), Postives = 142/256 (55.47%), Query Frame = 0
Query: 842 RRVIQPAEAKAGRWPWQVEIYTSANNHICGGAMITNRWLLTAAHCIDKSNVATASEKYFVVLGEFNRSRNEGHEFKYNIQRVILHPGYDPQTLNAIQHDKDIALMQLDQNVELTSYIGTVCVPNT-QNIDYWDNCVLTGWGKPTYPGSS--AYVLQQGLLNVVTNQECQRKLKEDSVGEPGDEITSNMICGDDKTKSGVSGCQGDSGGPFVCRRKSDNKWYLRGLVSWGSQRCEIKEMYQVLTRVSSFYQWITNNI 1094
+R++ A G WPWQV + S+ H CGG++I+ W++TAAHC NV+ ++FVVLGE++RS N ++ R I HP ++ T+N D+ L++L + T+ I VC+ ++ + + CV TGWG+ + G+ A+ LQQ L +VT +C++ G IT +MIC +G S CQGDSGGP VC++ N W L G+VSWG++ C ++ V TRVS F WI I
Sbjct: 32 QRIVNGENAVLGSWPWQVSLQDSSGFHFCGGSLISQSWVVTAAHC----NVSPG--RHFVVLGEYDRSSNAEPLQVLSVSRAITHPSWNSTTMN-----NDVTLLKLASPAQYTTRISPVCLASSNEALTEGLTCVTTGWGRLSGVGNVTPAH-LQQVALPLVTVNQCRQYW--------GSSITDSMICAGG---AGASSCQGDSGGPLVCQK--GNTWVLIGIVSWGTKNCNVRAP-AVYTRVSKFSTWINQVI 261
The following BLAST results are available for this feature:
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