TCONS_00028719-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00028719-protein
Unique Name	TCONS_00028719-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	445

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00028719-protein ID=TCONS_00028719-protein|Name=TCONS_00028719-protein|organism=Clytia hemisphaerica|type=polypeptide|length=445bp
IYDFLRIIHNNVLLKFWLVAFFVYLGIMKKDKESKKSKANGELVLDEITG
DKTDLRLLKEQGITYPKSERKCLPSARDKYHFSLISFLRTTIGKDLTKVP
MPVFFNEPLSFLQRLTEDLEYANLLNKAADCECPVERLVYVSAFASSNYA
NVPGRFWKPFNPLLGETFEYHNQEHGYSVIAEQVSHHPPISAIHVESDKW
IFWQEYKLDTRFRGVYVKVCPTGDVHLKFKSNDCHYSWKKPNTSIHNIVF
GTLWVDHEGSVEIESHQTKESAVVHFRNYKKVSKDYLKLTGSVTDKSGDV
VYHLEGGWMEGLKAKPCEGTNRREIDMWTATPKPDDTAKYFGLTEFAMHL
NEMNEDINCPTDSRLRPDQRLLEEGNIDEAGAQKYRLEEKQRAARKKREN
QRQSWTPRWFRLVTDPDTGSSSHVYNGGYWKAKVEKDFSACPDIY

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_016291	XLOC_016291	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00028719	TCONS_00028719	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000648	Oxysterol-bd
IPR018494	Oxysterol-bd_CS

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000648	Oxysterol-binding protein	PFAM	PF01237	Oxysterol_BP	coord: 83..431 e-value: 3.0E-132 score: 440.9
IPR018494	Oxysterol-binding protein, conserved site	PROSITE	PS01013	OSBP	coord: 182..192
None	No IPR available	SUPERFAMILY	144000	Oxysterol-binding protein-like	coord: 78..445

Blast

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BLAST of TCONS_00028719-protein vs. Swiss-Prot (Human)
Match: OSBP1 (Oxysterol-binding protein 1 OS=Homo sapiens GN=OSBP PE=1 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 6.841e-101
Identity = 184/428 (42.99%), Postives = 251/428 (58.64%), Query Frame = 0

Query:   48 ITGDKTDLRLLKE--QGITYPKSERKCLPSARDKYHFSLISFLRTTIGKDLTKVPMPVFFNEPLSFLQRLTEDLEYANLLNKAADCECPVERLVYVSAFASSNYANVPGRFWKPFNPLLGETFEYHN-QEHGYSVIAEQVSHHPPISAIHVES-DKWIFWQEYKLDTRFRGVYVKVCPTGDVHLKFKSNDCHYSWKKPNTSIHNIVFGTLWVDHEGSVEIESHQTKESAVVHFRNYKKVSKDYL-KLTGSVTDKSGDVVYHLEGGW---MEGLKAKPCEGTN------------RREIDMWTATPKPDDTAKYFGLTEFAMHLNEMNEDINCPTDSRLRPDQRLLEEGNIDEAGAQKYRLEEKQRAARKKRENQRQSWT----------PRWFRLVTDPDTGSSSHVYNGGYWKAKVEKDFSACPDIY 445
            I+G  +D+ L ++    +   K E++     +  Y  +L S ++  IGK+L+K+PMPV FNEPLS LQRLTEDLEY  LL++AA CE  +E+L YV+AF  S+Y+    R  KPFNPLLGETFE    +E+GY  + EQVSHHPP +A H ES + W   QE K+ ++FRG Y+ + P G +H  F +   HY+WKK  T++HNI+ G LW+D  G ++I +H+T +   + F  Y   S+D   K+TG VTD SG V + L G W   ME  K +P  G N               + +W   P P +    +  +E A+ LN   E    PTDSRLRPDQRL+E G  DEA A+K RLEEKQR +RKKRE +    T            WF    DP T   +H+Y G YW+ K ++D+S+CPDI+
Sbjct:  381 ISGASSDISLDEQYKHQLEETKKEKRTRIPYKPNYSLNLWSIMKNCIGKELSKIPMPVNFNEPLSMLQRLTEDLEYHELLDRAAKCENSLEQLCYVAAFTVSSYSTTVFRTSKPFNPLLGETFELDRLEENGYRSLCEQVSHHPPAAAHHAESKNGWTLRQEIKITSKFRGKYLSIMPLGTIHCIFHATGHHYTWKKVTTTVHNIIVGKLWIDQSGEIDIVNHKTGDKCNLKFVPYSYFSRDVARKVTGEVTDPSGKVHFALLGTWDEKMECFKVQPVIGENGGDARQRGHEAEESRVMLWKRNPLPKNAENMYYFSELALTLNAW-ESGTAPTDSRLRPDQRLMENGRWDEANAEKQRLEEKQRLSRKKREAEAMKATEDGTPYDPYKALWFERKKDPVTKELTHIYRGEYWECKEKQDWSSCPDIF 807

The following BLAST results are available for this feature:

BLAST of TCONS_00028719-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00028719-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
OSBP1	6.841e-101	42.99	Oxysterol-binding protein 1 OS=Homo sapiens GN=OSB...	[more]

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TCONS_00028719-protein (polypeptide) - C. hemisphaerica