TCONS_00027286 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027286
Unique NameTCONS_00027286
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2687

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027286 ID=TCONS_00027286|Name=TCONS_00027286|organism=Clytia hemisphaerica|type=transcript|length=2687bp
GTCGTATTCGGTGAAAAATTTATaggtaaacaaaggatggaATCCCCTAT
AGCAATGGATTCAAACGAAATTATTTTTAACAATCAAAAACACAAACAAC
GCTCCATTATGCAACCCTTCGATTGCAAAGACACGTGGGCTGATCTACAC
AAACAAATGAAGGATTCTGTTGAATACACAGACTTCTTCCGATTCAGTCA
AAGTATTTACAAGAATAGAATCAACAATGATGTCAACTTTCTGGATATCA
TGGAAAATCCAGAAGAAATTAAAAGCGGATTCAGATATCTCCAATCTCGA
TACAACGAACTTCACAACTATGTCACAGAACTAGATTCAGAAGTTGATAG
CTCATCCAGCATCATCAAGCAGTTAAAGAAATTTGCCTTCAAGCAAATGT
GTTCAGCTGAGAAGAAACTTTTGAGCAACATGTTCAACATTTCATCAGAG
TCGAAATATTTGCGGGAGAATTTTCACGATCATcagtttgtttacatcga
tAATTTGGTGTTGCTTGATGAACGATTGGATGAAGTCGAGGATGTTGACG
TTTTGAAGAAAATGTACACTTATCTTAAACACAGATTCACTGAATTGCAG
AAATATTCATTGATTCAAGAATCGAAAATTGAAGACTGTAAACATCTTAT
GGATGAGTTGTTTGGAAAAATCGAAGGAGAAATTGAAGAGGATACATTTC
CATTCGTTAACTCTCCTGAGGATCGAGTTGGTCATTCTCCCGAAGCAGAA
GGAAGTGTTGTTCACTCTCCCAAAGTAAAAAGACAAATTGTTCGTTCTCC
CGAAGCAGAAAGACGAGTTGTTCACTCTCCCGAAGCTGAAGGACGAGTTG
TTCACTCTCCCGAAGCAGAAGGACGAGTTGTACACTCTCCCGAAGTAAAA
GACTCTCCAGTTTCTTACCATCGAAGAACACCAGTGGATGTCGAACAAAG
GAAAGTGACGTCACCAGAACACGTTTTGAGATACACACCACTTGATGAAG
ATGATGactcatcattttttgaaaatcaacgaGTTTCTCCAGAGCTGGAA
TCGCCAGAAAACGAAGAATATGATTATGAAAACGAGTTTGACGAAGAACA
AATGTACTATGATAACCGTTCTGTGATTCGAAAACCACAAAGAGCTGTCA
TGCCGGAAGCTGTCGCTCCAAAGGGATTACCACCAATCCCAACCCACGTC
GTTTCAACCAAGAGAATTGCTCCTGAATCCAaagttaaaatcttcaaaga
GAAAGTCAAATCTTACAATAACGTTGGGTCCACTGGTTATGGAAAATCTA
AACCAAAACGTAACGAGTTCAACAGGGCCACTATTTTGCCACCTGTTCAA
AGACGAGTCGTCAAACGCCAGCCAAATGTTGCTGAACCACAACAATACAT
ACATTCTGAATACGAACTTGCCATCAAACGTACATCCATCAAAGGAATCG
TCAAACCAAGCCTTTTGAACAAAGATATTTTCCGTTTACGTGATCCGTCA
GTTCGTGTACGTGGTGCACCAAAACAACAAGACGTTCGCCAAGAGTTGAA
TAAAACTCCAGTTTTACCATCCATCTCTCAGCAAAGAGATCTGATTCAAA
CCGTCTCTCCACATAAGCAAATTCATCAAAGCTGTGTTGCTCCACAAAAC
CAAGCTCCCCAAACCTTAGCCTTGCCAAGGATTCCTCAACCACCAACTCA
ACCAAAACAATCCATCCAACAAACTGTCTCTAGAATTCCACGACTCCCAA
ACATCCAACAATCACAACCAAAACAAGGACAAATACAAAGCCGTATTCCA
CAGCCACCAAAAGGCGAACGCACGAGACACACAGCAAACAAATTCATCCA
ACGTAGAATTGCAAGATTCCAATGaacacaaaaacaccaaaacagtacaa
aaatataaaaaaaagtaaataatttttaataaCAGTTTCAATACCGGGTC
TTTTCTTATCTTACAATATATATCTTCCTCCGTATAAATATATCTTGTGC
TTTATTCCCAGATTCAATTTACAACTTCAGTATCTGCCAAAATTCATTGG
ATTGGAGTGACCATTAAAGGACTatttagactacacaatatatcgTTTTC
GGACAGTAATATACGAAGTAAATAACAGGAGCTCTATAATGAATATGAAT
TTTCTtgctgtaaacaatcccccctatattgttggaaaattgcaaatcaa
GCTGACATTATATTACGGAcactttttcaatatattgccggcactcagca
atatatcatcaatatattgcctgacaatatattgtgtagtgtatgtagcc
cttaagaaaaaaaatattctctaACTATTAATTCAGATCACAGATGAACA
CCAATCTACAAGCATTTGTCCTACCTCTTTCATAGTCTgttcaaagtttt
tgttttctaaactATGGTCAGCATTTTCTATCCACTTCAATGTTTTGCTT
TTACAGGGCAATAAATTAAATTGTTCATTCATTAGCTTCATATCACACAT
AGTGTCTTTAGTACCATTTACTATAAGAATGGGTATCTCAATGCCTTTTA
AATGTGATGTTCGCAAATTGTTATGGTCGTTTGATTTATGTAAAGGATAG
CTTAAACAAAAAACTCCATCAATAACTGAATCGCTTTTTGATTGACATGC
GATTTCTGCTGCTACTCTACCACCCATTGATCGCCCT
Run BLAST on NCBI

protein sequence of TCONS_00027286-protein

>TCONS_00027286-protein ID=TCONS_00027286-protein|Name=TCONS_00027286-protein|organism=Clytia hemisphaerica|type=polypeptide|length=624bp
VVFGEKFIGKQRMESPIAMDSNEIIFNNQKHKQRSIMQPFDCKDTWADLH
KQMKDSVEYTDFFRFSQSIYKNRINNDVNFLDIMENPEEIKSGFRYLQSR
YNELHNYVTELDSEVDSSSSIIKQLKKFAFKQMCSAEKKLLSNMFNISSE
SKYLRENFHDHQFVYIDNLVLLDERLDEVEDVDVLKKMYTYLKHRFTELQ
KYSLIQESKIEDCKHLMDELFGKIEGEIEEDTFPFVNSPEDRVGHSPEAE
GSVVHSPKVKRQIVRSPEAERRVVHSPEAEGRVVHSPEAEGRVVHSPEVK
DSPVSYHRRTPVDVEQRKVTSPEHVLRYTPLDEDDDSSFFENQRVSPELE
SPENEEYDYENEFDEEQMYYDNRSVIRKPQRAVMPEAVAPKGLPPIPTHV
VSTKRIAPESKVKIFKEKVKSYNNVGSTGYGKSKPKRNEFNRATILPPVQ
RRVVKRQPNVAEPQQYIHSEYELAIKRTSIKGIVKPSLLNKDIFRLRDPS
VRVRGAPKQQDVRQELNKTPVLPSISQQRDLIQTVSPHKQIHQSCVAPQN
QAPQTLALPRIPQPPTQPKQSIQQTVSRIPRLPNIQQSQPKQGQIQSRIP
QPPKGERTRHTANKFIQRRIARFQ
Run BLAST on NCBI

transcript from alignment at sc0000613:98023..101317+

Legend: exonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027286 ID=TCONS_00027286|Name=TCONS_00027286|organism=Clytia hemisphaerica|type=transcript|length=3295bp|location=Sequence derived from alignment at sc0000613:98023..101317+ (Clytia hemisphaerica)
GTCGTATTCGGTGAAAAATTTATaggtaaacaaaggatggaATCCCCTAT AGCAATGGATTCAAACGAAATTATTTTTAACAATCAAAAACACAAACAAC GCTCCATTATGCAACCCTTCGATTGCAAAGACACGTGGGCTGATCTACAC AAACAAATGAAGGATTCTGTTGAATACACAGACTTCTTCCGATTCAGTCA AAGTATTTACAAGAATAGAATCAACAATGATGTCAACTTTCTGGATATCA TGGAAAATCCAGAAGAAATTAAAAGCGGATTCAGATATCTCCAATCTCGG TAAGCAAAAGTcaacaaatatttcagaaaacCCTTTATTAAAGTATAAAC CGGTACGAGGCTTCTTTGGCCTGTCAAGACCATAAGGCAGCCTTCcctgg aggggggggggtagtcaggcaaattgactgccgggtatgtgcggcggtta taggtatgtttttcaaaatatcagaaaagcACTGTAAGGGTGAAAATTTG TGCTCGagaatcttgatttttttgctctaaaagtgttttaaatttataaa aaatgcaCTGTCAGGGTattctaaaagccatttttttcgccgcacatacc gtcagttggtaaacccactgcccccggACAGCCTTTGCATATACTTGTTG AATGTAAGCTCTTCTGACTTTATTGAACTATAAGTGAAAACTAAAATTAT TACTTCAGATACAACGAACTTCACAACTATGTCACAGAACTAGATTCAGA AGTTGATAGCTCATCCAGCATCATCAAGCAGTTAAAGAAATTTGCCTTCA AGCAAATGTGTTCAGCTGAGAAGAAACTTTTGAGCAACATGTTCAACATT TCATCAGAGTCGAAATATTTGCGGGAGAATTTTCACGATCATcagtttgt ttacatcgatAATTTGGTGTTGCTTGATGAACGATTGGATGAAGTCGAGG ATGTTGACGTTTTGAAGAAAATGTACACTTATCTTAAACACAGGTGAGGA ACGTTTGggaggaaatatttttcatgttcaCGTTTTTATTACAACTCTCC AGAAGGGAACCGGTTAAGTTAAAAGATCAGATCAGATCAAAATCTTCTTG TGGTGATTGCAAAGAAATCTTACTAACCTCAGTAATGTAATCAAATAAAC GTCTCAAATTGACAATAAGTCATTGTTATCTCTCTTTTTCAGATTCACTG AATTGCAGAAATATTCATTGATTCAAGAATCGAAAATTGAAGACTGTAAA CATCTTATGGATGAGTTGTTTGGAAAAATCGAAGGAGAAATTGAAGAGGA TACATTTCCATTCGTTAACTCTCCTGAGGATCGAGTTGGTCATTCTCCCG AAGCAGAAGGAAGTGTTGTTCACTCTCCCAAAGTAAAAAGACAAATTGTT CGTTCTCCCGAAGCAGAAAGACGAGTTGTTCACTCTCCCGAAGCTGAAGG ACGAGTTGTTCACTCTCCCGAAGCAGAAGGACGAGTTGTACACTCTCCCG AAGTAAAAGACTCTCCAGTTTCTTACCATCGAAGAACACCAGTGGATGTC GAACAAAGGAAAGTGACGTCACCAGAACACGTTTTGAGATACACACCACT TGATGAAGATGATGactcatcattttttgaaaatcaacgaGTTTCTCCAG AGCTGGAATCGCCAGAAAACGAAGAATATGATTATGAAAACGAGTTTGAC GAAGAACAAATGTACTATGATAACCGTTCTGTGATTCGAAAACCACAAAG AGCTGTCATGCCGGAAGCTGTCGCTCCAAAGGGATTACCACCAATCCCAA CCCACGTCGTTTCAACCAAGAGAATTGCTCCTGAATCCAaagttaaaatc ttcaaagaGAAAGTCAAATCTTACAATAACGTTGGGTCCACTGGTTATGG AAAATCTAAACCAAAACGTAACGAGTTCAACAGGGCCACTATTTTGCCAC CTGTTCAAAGACGAGTCGTCAAACGCCAGCCAAATGTTGCTGAACCACAA CAATACATACATTCTGAATACGAACTTGCCATCAAACGTACATCCATCAA AGGAATCGTCAAACCAAGCCTTTTGAACAAAGATATTTTCCGTTTACGTG ATCCGTCAGTTCGTGTACGTGGTGCACCAAAACAACAAGACGTTCGCCAA GAGTTGAATAAAACTCCAGTTTTACCATCCATCTCTCAGCAAAGAGATCT GATTCAAACCGTCTCTCCACATAAGCAAATTCATCAAAGCTGTGTTGCTC CACAAAACCAAGCTCCCCAAACCTTAGCCTTGCCAAGGATTCCTCAACCA CCAACTCAACCAAAACAATCCATCCAACAAACTGTCTCTAGAATTCCACG ACTCCCAAACATCCAACAATCACAACCAAAACAAGGACAAATACAAAGCC GTATTCCACAGCCACCAAAAGGCGAACGCACGAGACACACAGCAAACAAA TTCATCCAACGTAGAATTGCAAGATTCCAATGaacacaaaaacaccaaaa cagtacaaaaatataaaaaaaagtaaataatttttaataaCAGTTTCAAT ACCGGGTCTTTTCTTATCTTACAATATATATCTTCCTCCGTATAAATATA TCTTGTGCTTTATTCCCAGATTCAATTTACAACTTCAGTATCTGCCAAAA TTCATTGGATTGGAGTGACCATTAAAGGACTatttagactacacaatata tcgTTTTCGGACAGTAATATACGAAGTAAATAACAGGAGCTCTATAATGA ATATGAATTTTCTtgctgtaaacaatcccccctatattgttggaaaattg caaatcaaGCTGACATTATATTACGGAcactttttcaatatattgccggc actcagcaatatatcatcaatatattgcctgacaatatattgtgtagtgt atgtagcccttaagaaaaaaaatattctctaACTATTAATTCAGATCACA GATGAACACCAATCTACAAGCATTTGTCCTACCTCTTTCATAGTCTgttc aaagtttttgttttctaaactATGGTCAGCATTTTCTATCCACTTCAATG TTTTGCTTTTACAGGGCAATAAATTAAATTGTTCATTCATTAGCTTCATA TCACACATAGTGTCTTTAGTACCATTTACTATAAGAATGGGTATCTCAAT GCCTTTTAAATGTGATGTTCGCAAATTGTTATGGTCGTTTGATTTATGTA AAGGATAGCTTAAACAAAAAACTCCATCAATAACTGAATCGCTTTTTGAT TGACATGCGATTTCTGCTGCTACTCTACCACCCATTGATCGCCCT

Coding sequence (CDS) from alignment at sc0000613:98023..101317+

>TCONS_00027286 ID=TCONS_00027286|Name=TCONS_00027286|organism=Clytia hemisphaerica|type=CDS|length=5625bp|location=Sequence derived from alignment at sc0000613:98023..101317+ (Clytia hemisphaerica)
GTCGTATTCGGTGAAAAATTTATaggtaaacaaaggatggaATCCCCTAT
AGCAATGGATTCAAACGAAATTATTTTTAACAATCAAAAACACAAACAAC
GCTCCATTATGCAACCCTTCGATTGCAAAGACACGTGGGCTGATCTACAC
AAACAAATGAAGGATTCTGTTGAATACACAGACTTCTTCCGATTCAGTCA
AAGTATTTACAAGAATAGAATCAACAATGATGTCAACTTTCTGGATATCA
TGGAAAATCCAGAAGAAATTAAAAGCGGATTCAGATATCTCCAATCTCGA
TACAACGAACTTCACAACTATGTCACAGAACTAGATTCAGAAGTTGATAG
CTCATCCAGCATCATCAAGCAGTTAAAGAAATTTGCCTTCAAGCAAATGT
GTTCAGCTGAGAAGAAACTTTTGAGCAACATGTTCAACATTTCATCAGAG
TCGAAATATTTGCGGGAGAATTTTCACGATCATcagtttgtttacatcga
tAATTTGGTGTTGCTTGATGAACGATTGGATGAAGTCGAGGATGTTGACG
TTTTGAAGAAAATGTACACTTATCTTAAACACAGATTCACTGAATTGCAG
AAATATTCATTGATTCAAGAATCGAAAATTGAAGACTGTAAACATCTTAT
GGATGAGTTGTTTGGAAAAATCGAAGGAGAAATTGAAGAGGATACATTTC
CATTCGTTAACTCTCCTGAGGATCGAGTTGGTCATTCTCCCGAAGCAGAA
GGAAGTGTTGTTCACTCTCCCAAAGTAAAAAGACAAATTGTTCGTTCTCC
CGAAGCAGAAAGACGAGTTGTTCACTCTCCCGAAGCTGAAGGACGAGTTG
TTCACTCTCCCGAAGCAGAAGGACGAGTTGTACACTCTCCCGAAGTAAAA
GACTCTCCAGTTTCTTACCATCGAAGAACACCAGTGGATGTCGAACAAAG
GAAAGTGACGTCACCAGAACACGTTTTGAGATACACACCACTTGATGAAG
ATGATGactcatcattttttgaaaatcaacgaGTTTCTCCAGAGCTGGAA
TCGCCAGAAAACGAAGAATATGATTATGAAAACGAGTTTGACGAAGAACA
AATGTACTATGATAACCGTTCTGTGATTCGAAAACCACAAAGAGCTGTCA
TGCCGGAAGCTGTCGCTCCAAAGGGATTACCACCAATCCCAACCCACGTC
GTTTCAACCAAGAGAATTGCTCCTGAATCCAaagttaaaatcttcaaaga
GAAAGTCAAATCTTACAATAACGTTGGGTCCACTGGTTATGGAAAATCTA
AACCAAAACGTAACGAGTTCAACAGGGCCACTATTTTGCCACCTGTTCAA
AGACGAGTCGTCAAACGCCAGCCAAATGTTGCTGAACCACAACAATACAT
ACATTCTGAATACGAACTTGCCATCAAACGTACATCCATCAAAGGAATCG
TCAAACCAAGCCTTTTGAACAAAGATATTTTCCGTTTACGTGATCCGTCA
GTTCGTGTACGTGGTGCACCAAAACAACAAGACGTTCGCCAAGAGTTGAA
TAAAACTCCAGTTTTACCATCCATCTCTCAGCAAAGAGATCTGATTCAAA
CCGTCTCTCCACATAAGCAAATTCATCAAAGCTGTGTTGCTCCACAAAAC
CAAGCTCCCCAAACCTTAGCCTTGCCAAGGATTCCTCAACCACCAACTCA
ACCAAAACAATCCATCCAACAAACTGTCTCTAGAATTCCACGACTCCCAA
ACATCCAACAATCACAACCAAAACAAGGACAAATACAAAGCCGTATTCCA
CAGCCACCAAAAGGCGAACGCACGAGACACACAGCAAACAAATTCATCCA
ACGTAGAATTGCAAGATTCCAATGaGTCGTATTCGGTGAAAAATTTATag
gtaaacaaaggatggaATCCCCTATAGCAATGGATTCAAACGAAATTATT
TTTAACAATCAAAAACACAAACAACGCTCCATTATGCAACCCTTCGATTG
CAAAGACACGTGGGCTGATCTACACAAACAAATGAAGGATTCTGTTGAAT
ACACAGACTTCTTCCGATTCAGTCAAAGTATTTACAAGAATAGAATCAAC
AATGATGTCAACTTTCTGGATATCATGGAAAATCCAGAAGAAATTAAAAG
CGGATTCAGATATCTCCAATCTCGATACAACGAACTTCACAACTATGTCA
CAGAACTAGATTCAGAAGTTGATAGCTCATCCAGCATCATCAAGCAGTTA
AAGAAATTTGCCTTCAAGCAAATGTGTTCAGCTGAGAAGAAACTTTTGAG
CAACATGTTCAACATTTCATCAGAGTCGAAATATTTGCGGGAGAATTTTC
ACGATCATcagtttgtttacatcgatAATTTGGTGTTGCTTGATGAACGA
TTGGATGAAGTCGAGGATGTTGACGTTTTGAAGAAAATGTACACTTATCT
TAAACACAGATTCACTGAATTGCAGAAATATTCATTGATTCAAGAATCGA
AAATTGAAGACTGTAAACATCTTATGGATGAGTTGTTTGGAAAAATCGAA
GGAGAAATTGAAGAGGATACATTTCCATTCGTTAACTCTCCTGAGGATCG
AGTTGGTCATTCTCCCGAAGCAGAAGGAAGTGTTGTTCACTCTCCCAAAG
TAAAAAGACAAATTGTTCGTTCTCCCGAAGCAGAAAGACGAGTTGTTCAC
TCTCCCGAAGCTGAAGGACGAGTTGTTCACTCTCCCGAAGCAGAAGGACG
AGTTGTACACTCTCCCGAAGTAAAAGACTCTCCAGTTTCTTACCATCGAA
GAACACCAGTGGATGTCGAACAAAGGAAAGTGACGTCACCAGAACACGTT
TTGAGATACACACCACTTGATGAAGATGATGactcatcattttttgaaaa
tcaacgaGTTTCTCCAGAGCTGGAATCGCCAGAAAACGAAGAATATGATT
ATGAAAACGAGTTTGACGAAGAACAAATGTACTATGATAACCGTTCTGTG
ATTCGAAAACCACAAAGAGCTGTCATGCCGGAAGCTGTCGCTCCAAAGGG
ATTACCACCAATCCCAACCCACGTCGTTTCAACCAAGAGAATTGCTCCTG
AATCCAaagttaaaatcttcaaagaGAAAGTCAAATCTTACAATAACGTT
GGGTCCACTGGTTATGGAAAATCTAAACCAAAACGTAACGAGTTCAACAG
GGCCACTATTTTGCCACCTGTTCAAAGACGAGTCGTCAAACGCCAGCCAA
ATGTTGCTGAACCACAACAATACATACATTCTGAATACGAACTTGCCATC
AAACGTACATCCATCAAAGGAATCGTCAAACCAAGCCTTTTGAACAAAGA
TATTTTCCGTTTACGTGATCCGTCAGTTCGTGTACGTGGTGCACCAAAAC
AACAAGACGTTCGCCAAGAGTTGAATAAAACTCCAGTTTTACCATCCATC
TCTCAGCAAAGAGATCTGATTCAAACCGTCTCTCCACATAAGCAAATTCA
TCAAAGCTGTGTTGCTCCACAAAACCAAGCTCCCCAAACCTTAGCCTTGC
CAAGGATTCCTCAACCACCAACTCAACCAAAACAATCCATCCAACAAACT
GTCTCTAGAATTCCACGACTCCCAAACATCCAACAATCACAACCAAAACA
AGGACAAATACAAAGCCGTATTCCACAGCCACCAAAAGGCGAACGCACGA
GACACACAGCAAACAAATTCATCCAACGTAGAATTGCAAGATTCCAATGa
GTCGTATTCGGTGAAAAATTTATaggtaaacaaaggatggaATCCCCTAT
AGCAATGGATTCAAACGAAATTATTTTTAACAATCAAAAACACAAACAAC
GCTCCATTATGCAACCCTTCGATTGCAAAGACACGTGGGCTGATCTACAC
AAACAAATGAAGGATTCTGTTGAATACACAGACTTCTTCCGATTCAGTCA
AAGTATTTACAAGAATAGAATCAACAATGATGTCAACTTTCTGGATATCA
TGGAAAATCCAGAAGAAATTAAAAGCGGATTCAGATATCTCCAATCTCGA
TACAACGAACTTCACAACTATGTCACAGAACTAGATTCAGAAGTTGATAG
CTCATCCAGCATCATCAAGCAGTTAAAGAAATTTGCCTTCAAGCAAATGT
GTTCAGCTGAGAAGAAACTTTTGAGCAACATGTTCAACATTTCATCAGAG
TCGAAATATTTGCGGGAGAATTTTCACGATCATcagtttgtttacatcga
tAATTTGGTGTTGCTTGATGAACGATTGGATGAAGTCGAGGATGTTGACG
TTTTGAAGAAAATGTACACTTATCTTAAACACAGATTCACTGAATTGCAG
AAATATTCATTGATTCAAGAATCGAAAATTGAAGACTGTAAACATCTTAT
GGATGAGTTGTTTGGAAAAATCGAAGGAGAAATTGAAGAGGATACATTTC
CATTCGTTAACTCTCCTGAGGATCGAGTTGGTCATTCTCCCGAAGCAGAA
GGAAGTGTTGTTCACTCTCCCAAAGTAAAAAGACAAATTGTTCGTTCTCC
CGAAGCAGAAAGACGAGTTGTTCACTCTCCCGAAGCTGAAGGACGAGTTG
TTCACTCTCCCGAAGCAGAAGGACGAGTTGTACACTCTCCCGAAGTAAAA
GACTCTCCAGTTTCTTACCATCGAAGAACACCAGTGGATGTCGAACAAAG
GAAAGTGACGTCACCAGAACACGTTTTGAGATACACACCACTTGATGAAG
ATGATGactcatcattttttgaaaatcaacgaGTTTCTCCAGAGCTGGAA
TCGCCAGAAAACGAAGAATATGATTATGAAAACGAGTTTGACGAAGAACA
AATGTACTATGATAACCGTTCTGTGATTCGAAAACCACAAAGAGCTGTCA
TGCCGGAAGCTGTCGCTCCAAAGGGATTACCACCAATCCCAACCCACGTC
GTTTCAACCAAGAGAATTGCTCCTGAATCCAaagttaaaatcttcaaaga
GAAAGTCAAATCTTACAATAACGTTGGGTCCACTGGTTATGGAAAATCTA
AACCAAAACGTAACGAGTTCAACAGGGCCACTATTTTGCCACCTGTTCAA
AGACGAGTCGTCAAACGCCAGCCAAATGTTGCTGAACCACAACAATACAT
ACATTCTGAATACGAACTTGCCATCAAACGTACATCCATCAAAGGAATCG
TCAAACCAAGCCTTTTGAACAAAGATATTTTCCGTTTACGTGATCCGTCA
GTTCGTGTACGTGGTGCACCAAAACAACAAGACGTTCGCCAAGAGTTGAA
TAAAACTCCAGTTTTACCATCCATCTCTCAGCAAAGAGATCTGATTCAAA
CCGTCTCTCCACATAAGCAAATTCATCAAAGCTGTGTTGCTCCACAAAAC
CAAGCTCCCCAAACCTTAGCCTTGCCAAGGATTCCTCAACCACCAACTCA
ACCAAAACAATCCATCCAACAAACTGTCTCTAGAATTCCACGACTCCCAA
ACATCCAACAATCACAACCAAAACAAGGACAAATACAAAGCCGTATTCCA
CAGCCACCAAAAGGCGAACGCACGAGACACACAGCAAACAAATTCATCCA
ACGTAGAATTGCAAGATTCCAATGa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015358XLOC_015358Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027286-proteinTCONS_00027286-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027286-exon-sc0000613-1491911889:98023..98321TCONS_00027286-exon-sc0000613-1491911889:98023..98321Clytia hemisphaericaexon
TCONS_00027286-exon-sc0000613-1510915933:98023..98321TCONS_00027286-exon-sc0000613-1510915933:98023..98321Clytia hemisphaericaexon
TCONS_00027286-exon-sc0000613-1575043694:98023..98321TCONS_00027286-exon-sc0000613-1575043694:98023..98321Clytia hemisphaericaexon
TCONS_00027286-exon-sc0000613-1491911889:98731..99015TCONS_00027286-exon-sc0000613-1491911889:98731..99015Clytia hemisphaericaexon
TCONS_00027286-exon-sc0000613-1510915933:98731..99015TCONS_00027286-exon-sc0000613-1510915933:98731..99015Clytia hemisphaericaexon
TCONS_00027286-exon-sc0000613-1575043694:98731..99015TCONS_00027286-exon-sc0000613-1575043694:98731..99015Clytia hemisphaericaexon
TCONS_00027286-exon-sc0000613-1491911889:99215..101317TCONS_00027286-exon-sc0000613-1491911889:99215..101317Clytia hemisphaericaexon
TCONS_00027286-exon-sc0000613-1510915933:99215..101317TCONS_00027286-exon-sc0000613-1510915933:99215..101317Clytia hemisphaericaexon
TCONS_00027286-exon-sc0000613-1575043694:99215..101317TCONS_00027286-exon-sc0000613-1575043694:99215..101317Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000613supercontigsc0000613:98023..101317 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0825315 0.108626 0.223034 0.318749 1.8385 0.914078 1.0895 1.31877 0.755294 0.524266 0.462009 0.696306 0.389985 0.260526 0.0676072 0.0728907 0 0 0.111045 0.163917 0.178314 0.204376 0.0250344 0.0462708 1.16412 1.68923 0.311745 0.147319 0.0226831 0.0251777
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027286 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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