Thioredoxin domain containing protein (polypeptide) - C. hemisphaerica

Overview
NameThioredoxin domain containing protein
Unique NameTCONS_00060909-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length736

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00060909-protein ID=TCONS_00060909-protein|Name=Thioredoxin domain containing protein|organism=Clytia hemisphaerica|type=polypeptide|length=736bp
LVDRNEIVSVELHGFSDSSLILYCGVVYLRVITRSHAKAFFWTSKTKVAP
LKKTSIPRLELLACLLLTKLISNVDVALCERLKINRIVCWSDSTVSLCWI
RGKEKTWKAWVENRVVKIRKVVSRESWFHVAGTENPADAPTRPVEDFSAL
FQDKWLSGPSFLSNLDIDYDKRRDNKTEIPIDAQVELRRTDVNVMTVTSD
KKVSLSDVIDFSRHGSLRKLVTVVAFVLRFKNNFLAKKYKHDKVLTELTA
EETTNALSMILRDEQERMTNQPNFEKTKSNLNVYKDDEGYHRVKSRFNES
SLPTKKNPLLLPESTDFTKLLIKDTHEKCLHFGIETTLAKIRERYWIIRG
RKAVKNVLRKCVSCKRFQGRTMKPPESPELPEFRVNYNNHPFSSTGLDFA
GPLFVKNKGLPSSKVYILLFTCASSRAIHLELTPDMKSPAFIRGFQRFAS
RRGTPDEIINDNAKTFKSKEVKHLMTRLNVRQRFILPASPWWGGFYERLV
RSVKTALKKILKKALLTFEELQTVLSEIEATINQRPLCYTSDDEIGNTIT
PNHLMYGRQLNTTPSFNVFNTLTTPDDCTRRARHLMNLVKHFQKCFKSTY
LNELKQKHSYDKTRTSELKLTLNDVVLIRDDTPTPRTQWRMGKVESLVIG
ADGKIRGARLKVNTTNGTSTIHRPLQKIIPFEIADDTPTDDDPADNPLKP
SSSGSARGYEQTVRSRIRRRAAIEGQNLRRARDLER
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_038239XLOC_038239Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00060909TCONS_00060909Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012337RNaseH-like_dom
IPR001584Integrase_cat-core
IPR008042Retrotrans_Pao
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Vocabulary: Biological Process
TermDefinition
GO:0015074DNA integration
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012337Ribonuclease H-like domainGENE3D3.30.420.10coord: 384..623
e-value: 6.4E-34
score: 116.8
IPR012337Ribonuclease H-like domainSUPERFAMILY53098Ribonuclease H-likecoord: 389..539
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 407..505
e-value: 3.9E-14
score: 52.8
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 387..559
score: 16.464
IPR008042Retrotransposon, PaoPFAMPF05380Peptidase_A17coord: 4..93
e-value: 1.7E-21
score: 76.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 684..736

Blast
The following BLAST results are available for this feature:
BLAST of Thioredoxin domain containing protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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