TCONS_00071577-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00071577-protein
Unique NameTCONS_00071577-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length457

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00071577-protein ID=TCONS_00071577-protein|Name=TCONS_00071577-protein|organism=Clytia hemisphaerica|type=polypeptide|length=457bp
MEMLANTLILYWMALTMINLSQAMYIQDFGLNIPGAPCNQSFVEADEAPG
LVDWNTIEGQCIGNHTMKIVWRDPEVRPQKIHHYLVNIRHKADNVMHCFQ
TKSAETSYRVELKTMMKVDEIAFMQGEQLYVQIETFPRDRRLKSKEVGIG
SCPARGQWANWNTWSSCNCECKENYERCVGTKTRNRICLNNFNKHETFDY
NCKPGRKNLNTNCIKNCSMLPATPITNLSKQTSHKENGIENKYLVSIMVG
CFAFVAIVVFVLMYMRSKMKSNVIIVDEKPILNEQNRNPTVYFSYISKDQ
QKEGDLLHMIAALHEYGVQCVVDLLNTVEINNTGGLASWVPKSITNTDKI
VVLLTKQYIKALNETEKSGEEITELMEDRVCKIHMEYKLITSMLYNTCQT
SCKKVLLVLGKDVLKDEIPPLFRTMFNCPLPKRFDIKDDHFMALLGILLD
TEPFQVS
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_044474XLOC_044474Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00071577TCONS_00071577Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000884TSP1_rpt
IPR000157TIR_dom
IPR013568SEFIR_dom
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: Biological Process
TermDefinition
GO:0007165signal transduction
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0007165 signal transduction
molecular_function GO:0005515 protein binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000884Thrombospondin type-1 (TSP1) repeatGENE3D2.20.100.10coord: 154..235
e-value: 1.0E-4
score: 22.0
IPR000157Toll/interleukin-1 receptor homology (TIR) domainGENE3D3.40.50.10140coord: 282..444
e-value: 5.8E-6
score: 25.7
IPR013568SEFIR domainPFAMPF08357SEFIRcoord: 290..434
e-value: 3.6E-6
score: 27.2

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00071577-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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