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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00029221 ID=TCONS_00029221|Name=TCONS_00029221|organism=Clytia hemisphaerica|type=transcript|length=1301bp
CTATTCGATTGGATATTAGTTTTGAGCTACTGATTCGACTCGTTAAAATG
gttttcaaatataaacaaaaatgcAGACCTCATTTTTATCTCaaagagaa
aagaagaaaagaactgAAAATTATGAGAGTGGTGACGGTCAATGGTCGtg
cattttattttgaagcaaaacCGAAAGAGCCGCCAGATAATGATGGATAT
TTTGCAGAACAGACCGAACACCAACATCAAGAACCTCCTCGGTTGACAGA
GGAGGATGAGTATTTTGCCAAACGAATTGAGGAAACGCAACTCACTTTAG
AAGAATACACAAGACAAACTATTTTACAGAATGAAGAATATTTTACAGAC
TCTGACGTTGAAGACCCACCTTTACGGGAAGATgaatattttacagaacg
aAATAATCACGATAGAGAAATAGATGCATTTCCAAATACCAACCAACCAG
AAAGCAATATTCAATTAGATTTCGTATTGGAGCACAACAAAAGACGAGCA
CTCCATCACAACACTCCACCGTTAAAATGGAATCAAGACCTCGCTGATGG
AGCGCAAAAATGGGCTGAAAAGCTGATCAAAGAGCATGATGGGAAATTAA
TGCATTGTAAAGAACGAGGAAATGATGTTGGGGAAAACCTTTTTGTTGCC
ATGTCAACTGAAACACATGATGAAAGTGACCTAGCCGTAAAAACTCTGGA
TAAATGgtACGGCGAGATCAAAGATTACAATTTCTCCAAATCAACCTATA
CTTCAAAAGCTGGTCATTTCTCTCAAGTCGTTTGGGCGGGCTCGCAACAA
ATGGGCGTTGGTTACGCCCAAAGGAAGATTGGTCAATTTAATACAGTGGT
AGTGTGTGGGCGGTACCACCCTGCTGGTAATATGAATATGGAGGGatatt
ttaaaaacaatgttttCCCACCCAAGTAAGCATCCTTCATAAGAACAGAG
AACAAGAAAAGTTTCCgttatttaattttaaaaatatatataactgtaaa
taagattttcacaaataaaaagtaatttcaaATTATCAAACTTTGGCAAA
GAAAATGTATTTAATATTGTCTGttctttgaaaatgaagttGTGATAAAT
ACAGCGTTTGTTTGTGTCAAACTTTCTTCCTCGTGAACTGTCATATAAGT
TTAATTAAACTCCGGTtaaggagtttcttaaaatcagtgtttttcatttg
taattgtgctatataattatcattttcacacgagtgatttttttatcTTA
GAAAATCattattgtgaaaaaaattttcaaaaagatttattccaTCGTAA
G Run BLAST on NCBI protein sequence of TCONS_00029221-protein >TCONS_00029221-protein ID=TCONS_00029221-protein|Name=TCONS_00029221-protein|organism=Clytia hemisphaerica|type=polypeptide|length=308bp
IRLDISFELLIRLVKMVFKYKQKCRPHFYLKEKRRKELKIMRVVTVNGRA
FYFEAKPKEPPDNDGYFAEQTEHQHQEPPRLTEEDEYFAKRIEETQLTLE
EYTRQTILQNEEYFTDSDVEDPPLREDEYFTERNNHDREIDAFPNTNQPE
SNIQLDFVLEHNKRRALHHNTPPLKWNQDLADGAQKWAEKLIKEHDGKLM
HCKERGNDVGENLFVAMSTETHDESDLAVKTLDKWYGEIKDYNFSKSTYT
SKAGHFSQVVWAGSQQMGVGYAQRKIGQFNTVVVCGRYHPAGNMNMEGYF
KNNVFPPK Run BLAST on NCBI transcript from alignment at sc0000730:57769..70840+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00029221 ID=TCONS_00029221|Name=TCONS_00029221|organism=Clytia hemisphaerica|type=transcript|length=13072bp|location=Sequence derived from alignment at sc0000730:57769..70840+ (Clytia hemisphaerica)
CTATTCGATTGGATATTAGTTTTGAGCTACTGATTCGACTCGTTAAAATG
gttttcaaatataaacaaaaatgcAGACCTCATTTTTATCTCaaagagaa
aagaagaaaagaactgAAAATTATGAGAGTGGTGACGGTCAATGGTCGtg
cattttattttgaagcaaaacCGAAAGAGCCGCCAGATAATGATGGATAT
TTTGCAGAACAGACCGAACACCAACATCAAGAACCTCCTCGGTTGACAGA
GGAGGATGAGTATTTTGCCAAACGAATTGAGGAAACGCAACTCACTTTAG
AAGAATACACAAGACAAACTATTTTACAGAATGAAGAATATTTTACAGAC
TCTGACGTTGAAGACCCACCTTTACGGGAAGATgaatattttacagaacg
aAATAATCACGATAGAGAAATAGATGCATTTCCAAATACCAACCAACCAG
AAAGCAATATTCAATTAGGTGagaattttaaactcttttgaaaaactttt
cgacACAAATTTCGTGTGGCCTTACCATGAAGGTAGGACGACCAGCACGG
TGCGTAAGGATGTGGGTTCGCCCCCTTCCTGGTGTTACacattcttttat
aagaactatatgaggacataaggcttcgatagccaaaatgctAAGAGCAA
GCTAAGAAAGTTTTAAGGTTTTGTGGattctaaaacacctgatttctcaa
gaaaattgacaaaaatactcacaaaatggtgaaattaagaatatgttaag
aaaatttatatccagaaaactcaaaatgctaagaacatcCGGAGGCTTCA
AGAATTTTGCTTGTTCTTAAGAAAACGTGTGTAAGtaccaaagattttga
aatggCACATAATGGGTCAAGAGTAAGTGCTGGAATCAGGGAAAAGGAGT
GACTCCCTTTCCATTGCTTTGGGAAGACAAAAAAGGGAGCTTTTGTGTCA
CTCTCAACTACTTCTAACATTAAGATTTTGAAGACGTATGGGTCATGAAT
GTTACAGTTGGAATAGTAACGGAATTACAGGAGTCCATTGGAAAAAATAT
TCAGGGGTAAAATGATCAGATGTGAGAAATATTCGGTTCGAGATGAAAAA
CAAATAATTCGATGAACTTGTTAATTAGtgacaataaaaaaaatgttttc
tttgctCGAAAACCAATAATTCATCCCAAGTCTTTCAAAAAAAGTCTTCC
TCTTTATTCCATATGcaaacaatttttctttttttctttcttggagAGAG
CTAAAGATTTcacaaaatttttgcttttccTGTTAAAGTTCTTATTGGAG
CTCGAAAGtttataaaaagttgaaaaatgtcAGGTACGAGTACTTTTGTT
CACTGAGGGATAGATGACCGATAGTTGGGTGACCGGGGGAGAGGCGTCGC
AGGAATAGATTATGAGGGGTGAGTGATCAAAGGGTGGAATGACTGAGGGG
TGAACGACTGTCGAAAAGTAGGATcgtgaaaatgaaatatattaaatatt
ttttgcataACCAAAGTCAGCTAATAGCTTCTAAGTAACTCCTTGAAAGC
TCAgagcagagatttgggaaaagaggataagaaatgcgctattcatctat
ttgaagctaggctgtagaatcttttgtttctattgaaatgtctgcGGCCG
ATCGATTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCCTTATAGAATGATCGCAT
CAATTTATACATACTGTagctaaaagaattgaaattcacattataaaacc
aaaaatgaTAAGCTTGTAAAACTAGGATGATTTTTGGTTATTTCTTGGAC
TAGAGTTTCTAAGTAACAATATCACGGAGGCCTCTTCAGCCGGGTAGTGA
TGTTGGGTATTAGAACAAATTGCAAACATGACAAAAATAGAgctcaaaag
aaagaaagaaaaaagaagcgatgataattcatgatatcaatgctaGAAGA
TCACAAATATCATGAAATCTTTCTTTTAAGAGCTTTACATGAGCTCGAAA
Caataaagcataaaataatccaaaaacattattgaaaaaaatacaatagt
taTACAAAACAGCTCCATCTAGGGATTTCCCCTGATATAATGATATNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNCACCTTCATTTATAACACCTGGGAAAATAAAGACg
tattgcatgaaaaaaatcagtatcATTCATGacttaacttgaaataaaat
tgagaagactataaaaaaagacgaaaaccTTACAACTGATTTTTAATTAG
TACTGATTCAGATTGTATAACTTGAAAGCTGGACTagaaaattatattaa
tatGCCCCATACAGTAGAGGACTAAATCCAATACATGTGTAACTCattgc
taaaaaattaaatacattTACATGTGGAAAAAATATTGGCAAAATAATCA
TTGTGCTCAGAAAAACTTGTTATAtaacattattttttatttatttgttc
tttatttaacgttggtaATAAAAAATAGTTACAAGTACTAATTAAATCCA
ACATGACATTCGAATATTTACTATATAGTAAATAATATTTNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGCcttgcttcttca
aagggtgccgaattcaaagggaaagaataggaaaacagcgagcggcagcg
gcgtttcttatcctcttttcccaaatctctgctcAGAGCAAACGCCTCTT
GAACTACTTTAACTCCTCCTGaaccaaatatattttctttattcatccaa
tcaaattttcaatttctttgacTATTTTATTTGTTCCCTGCTTCATtctt
atacacccccttctcacaggccgttcccactggaaaaattgggcaaaata
tcgtccccggtggaaaatcatcctccattttttgtccccactaaaagcaa
taaaatagaccaatcctcactgcaaaatatcatgctatttttcccctccc
tactgaattttgacttgaaaacaaaagaatccccAGCCGTAAAGAACATG
GGAATATCGATCCACAACTGAGTTTCAGTATGTTGTTTTTACCTGGCTGA
ATgaatcctactgggtctgtgaaaattatacatcttccTTCGCTCATGGA
ATTATTTGAAGACGTATATACATCCAATCTGCTTTAAAATGATTTCCTGG
CTCGTTGTTGGGAGGCTGATTTGGAGcagtttcttaaaaataaaacaaat
tcaaagaaaaacgcaaaattcatacacgatacgcatcccctataacaaaG
TAAATTCTGGGGATGTGCGCAGCCtagattatgtggtgtgtttggggcat
taaggcattaaggctcttacgaccctgtctctttAGCGGctttagaggga
tttttagagtgtctcttattttgctagcaacttgcgagtggagtctggat
cgcttcgcaacccttatacaatacgcaAAATAGGCTAGAAAATACTTTTC
ACCAGCTTTCCAATATTTTCCAACCGGTAATAGTCGTTCTGCTCTTAAAT
GTTGTTTCCTTGATTATACTTTGTTTTAGATTTACATGGTACGTTACCAG
AGCAACGGTATGAGTCTTAAGACTAAGGTGTATCGAATATTGGGAACAAT
GTTTATCTCAATTACCGTATCTTAATTTTGTAAGTTACAAATTTTACCCC
CTAGAAAGTATCCTTTctgtaattttgttgctgtagATTTCGTATTGGAG
CACAACAAAAGACGAGCACTCCATCACAACACTCCACCGTTAAAATGGAA
TCAAGACCTCGCTGATGGAGCGCAAAAATGGGCTGAAAAGCTGATCAAAG
AGCATGATGGGAAATTAATGCATTGTAAAGAACGAGGAAATGATGTTGGG
GAAAACCTTTTTGTTGCCATGTCAACTGAAACACATGATGAAAGTGACCT
AGCCGTAAAAACTCTGGATAAATGGTATGTATGTGTCTGcttttatttct
ttttatcggcgatccaaaaaatatctgcaatctgattggttaaaaagagt
acaatatatcttgtattttacatgtaaaaatataaattgacgaaaagatg
ttgttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNattttttgggtcaccgataaaccag
ttatcagacatctgctcgtacaatatggaaatatttcactcgttccggat
tttccgtatattttcctcgccttttattgtacggaaaaatctcggaattc
gtaaaatatttctcatattgtactcgcaactgtccgataactattacgta
tTTTGAGCTTTACAATAGTATAAATCAAACTTTTATTATTTGGATGCCTC
CCTTTAGTTGAGCAGATTTCTAGTCCCTTTCTTTAGTCCCTAgattgaac
aaatttttatttccacTGTGCGTATTAGAGttaccatggcgttctaaatc
tagatTAAGAACGCCATGAGTCACATAGAATTTGGACTATTTAACTGGGG
ATAGAGACTTTCTAGTTATTAGATTAgatggaaaatttcaacttattTTG
ACCGGATCAGGAGAATTTCAACTTATTTTGACCAGAAGCTGGATGATCTT
TACTTATTCtggttttaaattgttttatttcaaCTATTTCAGACGCCTTT
ACACGCCTCTCTTGGTGTCAGGGTTGTTAATTCATTTAGAAATCAACCGG
TGCAGAACTATAGGATATAATAAAAGGATCAAAAGTTTCAAGCAGTTgcg
ttaaaaaaaacttttctccaTGATTAAGTTAAATGGTAAAGttacaaaat
atgaaataaaatacaATGAATGAAATAAATCCCCTAagaaaatgacattt
caatAGAACAAATTAAGCATTCTTGGTCCGACGTTATGATTCGAAGGTGA
TGGTGAACACTTAAGGTCGGCCTTATGTGAAATAAACATCAAATTATGAT
TAACAAATTATGATTAACATCAAGTTACAATACGTAAGAAAAATAAGACT
TGGACCTGATATCATTTCCATTTACAATGGACAGCTTCGAACGCAGTATG
ACTGATCGATGGGAATCATTTTATCTCCCACCTGCCATTGGCCACGGGTT
CTACCGATTCCACCATGACTATTGAACCACCCATGAGCATCTCCGATTCC
ACCACCACTAGCTCTgccataaacataaacatatcctaaattgaaatgtt
aaaaacacattgaaataaaattgctaTTAATTTCAGTAAGAAAAGTACGA
ATAGAAAAACATTGAGTTCGTGAACTACGTCAAAATGTTACAGTTGTACA
CGACAAaaccaatttttccaaaactgAAACGCGAAAGAAAACCTTACCCA
GCAAGGAATTTCTTGGATTATAGGCAAGAAATTGGATTCTGCCGTCTCTT
CCAAGTCCGGTCACTTGAGCTCGATTGAAGTTAAAAAACCGTCCATCGCT
ATAAGAAGCTCGTCCATGCGCCGTACCCAGGACATCGATCGAACATGAAG
AATTGGAATTGTGAACTAAAAGAAGGTGTGGAAAATGTTTCAATTCTATA
TTCTATCCATAATTAACTGATCTCGATAGGATTGTTTTGTGATTAAATGC
TATTTCCTACTCAACTTAAAGGTAAAAGCCTAGTTTGAGCAGATTTCCCT
TCGAGAAAGACGTATTCTAAAAAATGATTTGTATATTGCCACCCTTTAAT
TGACTTTGGAATTCAGGAACTATTTTCTAGTGTTGTTATCTTTGTAAAct
tatatctttattttgaaagagTGCTCAGCTCAACCATAAAAAGTTGATTA
CCGCGGTGATGTAGAAAATAAAATAGCCTGTACCTTGCCTGTACTAAAAA
CGAATTGTATCAACTAGGCTTTAAATATATATCCTTTATGCAAGCAACAG
GAtcgaaatttttctttgaaatttcatGAATTTCATTGATCTTATTCATA
TTCGATAACAAATTTAGCGATTCTTTATTAATACCCCCTGAGGGCAAATT
GATAGTGAGGCTATATTTTCTGGGGCTGAGAAATGAacctaatcttaatt
tttctaagaaaagagAATACTATAAGggtcaaaactttgaaaaaatatcg
aCATACGATTGGCGCAAATGGAACAGTCCATAGGCTGCCATTGTCCTGGT
CTTGCAGTAACATTGCCTCTGTTCGAAAACCTTCCATGAGCATCTCCCTT
ACTTCCACCATTTTTATTGCCCCAAACTACTACTTCACCGATGAGTCCTA
AGCGAAAGTTGTATGCTACGAATCtctttacacccctgtatctCAGCCCT
CTAATGCGTTTTCGTtcaatattgaaatattttccaaTAACCGACTTTCC
TCCTTTATGATCCGAGCTGAGAACTGGTATCTTGCAGCtgttgcattttt
ctaaaaaaggaaaagaaaagataGCATTCTCAACATCTGAAGAAACTTAT
TTCTATTTACCGTATGATTTAAAATCGACAGAGACAAAAAGTTTTGCCAA
GAAACTCTGACTTTCtccaagtttttaatgaaaaaacttTCTCGAAAGAA
ATTACAAACCTATGATTACCACTGCAAGAAAAGCCAAAATGAGAATCTTC
AAATCCATCTTTCCACTGCTTTGTTGCCGAGACTTTTTTCTCTCGATTTG
TTGGTGAGGAATGAGACACAAGCTTCCCTTTTTATGCAAGAAAAATCAGA
GACGGATCTAGTCATTAAAGACACCTAGGCAGGAGGAAACCGTTATTATC
GTCTTCAAAAATCTATGGGGCTGTTTTCTTTTGTGAATTTTGGTGAAACA
ATTCTAACAATGCTACGAGGTCTGGGAGCGATTTTAAGATTTATTGTTTC
CATACCTTAATATGGGTATGATTAATTTCTCTTCATCAATTATAGGGCGT
TTTTCGATAAACAAGGAAGTGTAAATTCCTTGGAACTTTGTTTGCGTGTC
GTCTGTGATAGCACAACCATGATAAAGTTAGAATCTAGTTTGAAATCTGC
TTAATTTTGATGGTTTCGATGGATCTCGTTAAATCTTTCTAGCTTTTATC
TATTAAGGTTTAATCCGGCTGGCTTTTTGATCTGAGAAAATAAGATCAAA
GAAACTTGTTTTAGATGGTTACCTTGCTGGCACAGGGCATCATAGCAACG
TCTATGTAACGTAatttgaacgttgaaacaacgtcgtgtgtaAGGTGGGT
TTAAAGTAAAGTTTCAGCATGCTTTCAGCTTTCTAAACTTACAGCTATAC
CTTACCTCGCTAAGCTGGTCAGAATTCTTTACGCATTTATTAGACGAATT
TCAAGTAAACATTCAAAGTAAAATATGAGTCAGTCGAAAACATGGCCTAC
CTCTGTGATCCACcttaaaaactctaaaaaattGATTTGACTGTTATCAt
tctaaaaatatgaaaacaagATCTAATGCTGGACTAAAATAAACAAACCA
AATGAATAAACTAAAGTTTTGAGTCTTTATACACCTGACACCTAACAGAG
AGAAACATGCTGCGTTGAAAGCACCCATTTACGTCAGGTCAGTATTTTGT
GGTCAGGATAGTGATTGGATGGGGAACCGCCTGGGTGCTTTCGGTTTGGA
CGAGCGTAGCGAGAATGTTTTTTCTGTCAAGAACCTCTAGAACCTTTGTT
GGGGCACCTTTGGCCAAATCCCCTTTTAAGCTGGGAGGCAAGCCCATGGA
CAcccttgaaaaaatttccagcGCTTCACCAGAAGTCAGCTAGTTGCCTA
AGGCTTCACGCACATGAGGGCAAGAGTTTGAATCTGGTCCGGGTCAAAAC
ATTTTTAccaagttttgatattttatgtctTTTGGGTGTAGAATCCAAAA
AAGTGTTCCGAAGGGATAAGGTCGtctaaattgatttttttagtcGGTCA
TAAGATAGGCCATAGGGTAGGCTATATGGCCGGGCCATAGAAGTaggtca
agtttttttttttccacTGACCCGTAAAATATCTAGTCTGGaaacttttt
aagtttaaaatttttggatttgaGTTTAGGTTATGGTACTACCTCGTCAA
TTTTACCTTTTCCTGTGAAGCTGTTTCTAGATAACTTTCTCCTTGATTGT
TAAAGAGTTAGTGGTTTATGTAGCGTCTGTGTGACCCAATACTTCATTTA
CCTTGAAGTGAACACTTGTATGATCCCGCACAAATGAGGAGCCGCGAGGC
TTCCCACCTTTTAAAGGAAGATACTCCCTCTTTGCTAGTTTGTGATGTAT
TGGTCCCCGGCTTGGTCCGCGAAGGATGGTCGGGTGATTTGAGATGAGCT
GGTCGGTGATTGGAAAAATCAATCATGGAACTGAATTCAAGAATAACTaa
tttttgttgatgtttagTCAGGCCgtgtaatgaaattttcaacagcTTTT
AAATATTTCCACATTACACGGTAAATATTTTTATAGGCcaagcatttttc
aaaatctttcgaTATGCTCCTAATGTTTATGTTCCAGTGTAAAAGGCCCT
GTATCCTTTGAGTGAACATCTTGGTgtcctttatttaaaaaatcgtGACA
AGAAATTGCAGGTTGATTTTTTAGCACGCTCACGaaaattcaattgtcaa
tatcATCATAAAAGTTCGGTCAATCCTGCCATGCCGCCTTtacatataaa
taaaaaaacatatttcaagAAATTCGGAGAATAATTTTCTCGAATTGTGA
TGTCAAAATATAGTCCCAGTCTCTCTAAGATTGGCAATGGGAAATTATCG
AGTTGATGAGCTTTCAAGCAATGAGTTTTTTATCTATATAATATATaggt
aacacgaacaaatagtacaacGCTAAAGGCTCCTAACCTCacgcaaaagg
accaccagatcataccgccaggaggaaggaatTCCGACTAagctagacga
tgctatcgtccatttaaagtaaatgcgagaaagagttagggcgtcagggc
ggtttacgggaaaaaagtggtgGTAGAGtttacactgtaaacatctccgt
cactgcttactccacccgaatttatcacgcctctcctaaactattccctt
tttagtgatcttgtgtagacgatagaaTCGTCTACGACTAAGCTAACAAA
ATGAGCAATAATAATTAATAAATGGAAAAACCTGACTACAGTGGATAGTT
ATTACTCTCAATCATGGGAGATCAGCAGAACAGAAGATGTGTAAATTTTT
CTTCAACAGTTCCCAAAAATAACCgtattttcatttaatttctaGATTTT
GAGCTCTCCCGCATATTTCAGTGAAGTTTTATCCTCTGATTATTACATGG
CATTTTATACTGATGGTAAAAATGTAAAACACGTGAAAACAAGAAAAGTG
ATATCTAAATGTGTATAATAATCCGTCATCTAAAAATGCGAGGGAATTTC
TAAGGCATTTTTTTGTACCTTGGAGAGAGTAAAGATTATCCTATAGCTTC
CTACTTCCCACTACTTCCTACCATGAAAGGGATCAAAGAGTCgcttaaaa
aaattgtaaattttgactttcggaaacacatttcaaaaatttcttgtttt
actCATTTCGTTTAATCAATTTCCCGGTGAGTAGGGGTTAGGGGCTAATT
TCGAAGACAATTTTCTTCAATTAGGGTGTAGCCTATTGGTTATTAGTCTG
CAGCAGTGGCCCATTTTCGGTGTAGATGAGAACATTTAGATTACGCAATG
ACCTCAATCAGTCACCATTGGAAAATAATGTAATTTAGGTGTTTATttat
aatttatcaaaatattcaaaattttaggtACGGCGAGATCAAAGATTACA
ATTTCTCCAAATCAACCTATACTTCAAAAGCTGGTCATTTCTCTCAAGTC
GTTTGGGCGGGCTCGCAACAAATGGGCGTTGGTTACGCCCAAAGGAAGAT
TGGTCAATTTAATACAGTGGTAGTGTGTGGGCGGTACCACCCTGCTGGTA
ATATGAATATGGAGGGatattttaaaaacaatgttttCCCACCCAAGTAA
GCATCCTTCATAAGAACAGAGAACAAGAAAAGTTTCCgttatttaatttt
aaaaatatatataactgtaaataagattttcacaaataaaaagtaatttc
aaATTATCAAACTTTGGCAAAGAAAATGTATTTAATATTGTCTGttcttt
gaaaatgaagttGTGATAAATACAGCGTTTGTTTGTGTCAAACTTTCTTC
CTCGTGAACTGTCATATAAGTTTAATTAAACTCCGGTtaaggagtttctt
aaaatcagtgtttttcatttgtaattgtgctatataattatcattttcac
acgagtgatttttttatcTTAGAAAATCattattgtgaaaaaaattttca
aaaagatttattccaTCGTAAG Coding sequence (CDS) from alignment at sc0000730:57769..70840+ >TCONS_00029221 ID=TCONS_00029221|Name=TCONS_00029221|organism=Clytia hemisphaerica|type=CDS|length=2781bp|location=Sequence derived from alignment at sc0000730:57769..70840+ (Clytia hemisphaerica)
ATTCGATTGGATATTAGTTTTGAGCTACTGATTCGACTCGTTAAAATGgt
tttcaaatataaacaaaaatgcAGACCTCATTTTTATCTCaaagagaaaa
gaagaaaagaactgAAAATTATGAGAGTGGTGACGGTCAATGGTCGtgca
ttttattttgaagcaaaacCGAAAGAGCCGCCAGATAATGATGGATATTT
TGCAGAACAGACCGAACACCAACATCAAGAACCTCCTCGGTTGACAGAGG
AGGATGAGTATTTTGCCAAACGAATTGAGGAAACGCAACTCACTTTAGAA
GAATACACAAGACAAACTATTTTACAGAATGAAGAATATTTTACAGACTC
TGACGTTGAAGACCCACCTTTACGGGAAGATgaatattttacagaacgaA
ATAATCACGATAGAGAAATAGATGCATTTCCAAATACCAACCAACCAGAA
AGCAATATTCAATTAGATTTCGTATTGGAGCACAACAAAAGACGAGCACT
CCATCACAACACTCCACCGTTAAAATGGAATCAAGACCTCGCTGATGGAG
CGCAAAAATGGGCTGAAAAGCTGATCAAAGAGCATGATGGGAAATTAATG
CATTGTAAAGAACGAGGAAATGATGTTGGGGAAAACCTTTTTGTTGCCAT
GTCAACTGAAACACATGATGAAAGTGACCTAGCCGTAAAAACTCTGGATA
AATGgtACGGCGAGATCAAAGATTACAATTTCTCCAAATCAACCTATACT
TCAAAAGCTGGTCATTTCTCTCAAGTCGTTTGGGCGGGCTCGCAACAAAT
GGGCGTTGGTTACGCCCAAAGGAAGATTGGTCAATTTAATACAGTGGTAG
TGTGTGGGCGGTACCACCCTGCTGGTAATATGAATATGGAGGGatatttt
aaaaacaatgttttCCCACCCAAGTAAATTCGATTGGATATTAGTTTTGA
GCTACTGATTCGACTCGTTAAAATGgttttcaaatataaacaaaaatgcA
GACCTCATTTTTATCTCaaagagaaaagaagaaaagaactgAAAATTATG
AGAGTGGTGACGGTCAATGGTCGtgcattttattttgaagcaaaacCGAA
AGAGCCGCCAGATAATGATGGATATTTTGCAGAACAGACCGAACACCAAC
ATCAAGAACCTCCTCGGTTGACAGAGGAGGATGAGTATTTTGCCAAACGA
ATTGAGGAAACGCAACTCACTTTAGAAGAATACACAAGACAAACTATTTT
ACAGAATGAAGAATATTTTACAGACTCTGACGTTGAAGACCCACCTTTAC
GGGAAGATgaatattttacagaacgaAATAATCACGATAGAGAAATAGAT
GCATTTCCAAATACCAACCAACCAGAAAGCAATATTCAATTAGATTTCGT
ATTGGAGCACAACAAAAGACGAGCACTCCATCACAACACTCCACCGTTAA
AATGGAATCAAGACCTCGCTGATGGAGCGCAAAAATGGGCTGAAAAGCTG
ATCAAAGAGCATGATGGGAAATTAATGCATTGTAAAGAACGAGGAAATGA
TGTTGGGGAAAACCTTTTTGTTGCCATGTCAACTGAAACACATGATGAAA
GTGACCTAGCCGTAAAAACTCTGGATAAATGgtACGGCGAGATCAAAGAT
TACAATTTCTCCAAATCAACCTATACTTCAAAAGCTGGTCATTTCTCTCA
AGTCGTTTGGGCGGGCTCGCAACAAATGGGCGTTGGTTACGCCCAAAGGA
AGATTGGTCAATTTAATACAGTGGTAGTGTGTGGGCGGTACCACCCTGCT
GGTAATATGAATATGGAGGGatattttaaaaacaatgttttCCCACCCAA
GTAAATTCGATTGGATATTAGTTTTGAGCTACTGATTCGACTCGTTAAAA
TGgttttcaaatataaacaaaaatgcAGACCTCATTTTTATCTCaaagag
aaaagaagaaaagaactgAAAATTATGAGAGTGGTGACGGTCAATGGTCG
tgcattttattttgaagcaaaacCGAAAGAGCCGCCAGATAATGATGGAT
ATTTTGCAGAACAGACCGAACACCAACATCAAGAACCTCCTCGGTTGACA
GAGGAGGATGAGTATTTTGCCAAACGAATTGAGGAAACGCAACTCACTTT
AGAAGAATACACAAGACAAACTATTTTACAGAATGAAGAATATTTTACAG
ACTCTGACGTTGAAGACCCACCTTTACGGGAAGATgaatattttacagaa
cgaAATAATCACGATAGAGAAATAGATGCATTTCCAAATACCAACCAACC
AGAAAGCAATATTCAATTAGATTTCGTATTGGAGCACAACAAAAGACGAG
CACTCCATCACAACACTCCACCGTTAAAATGGAATCAAGACCTCGCTGAT
GGAGCGCAAAAATGGGCTGAAAAGCTGATCAAAGAGCATGATGGGAAATT
AATGCATTGTAAAGAACGAGGAAATGATGTTGGGGAAAACCTTTTTGTTG
CCATGTCAACTGAAACACATGATGAAAGTGACCTAGCCGTAAAAACTCTG
GATAAATGgtACGGCGAGATCAAAGATTACAATTTCTCCAAATCAACCTA
TACTTCAAAAGCTGGTCATTTCTCTCAAGTCGTTTGGGCGGGCTCGCAAC
AAATGGGCGTTGGTTACGCCCAAAGGAAGATTGGTCAATTTAATACAGTG
GTAGTGTGTGGGCGGTACCACCCTGCTGGTAATATGAATATGGAGGGata
ttttaaaaacaatgttttCCCACCCAAGTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00029221-exon-sc0000730-1491911889:57769..58236 | TCONS_00029221-exon-sc0000730-1491911889:57769..58236 | Clytia hemisphaerica | exon |
| TCONS_00029221-exon-sc0000730-1510915933:57769..58236 | TCONS_00029221-exon-sc0000730-1510915933:57769..58236 | Clytia hemisphaerica | exon |
| TCONS_00029221-exon-sc0000730-1575043694:57769..58236 | TCONS_00029221-exon-sc0000730-1575043694:57769..58236 | Clytia hemisphaerica | exon |
| TCONS_00029221-exon-sc0000730-1491911889:63855..64092 | TCONS_00029221-exon-sc0000730-1491911889:63855..64092 | Clytia hemisphaerica | exon |
| TCONS_00029221-exon-sc0000730-1510915933:63855..64092 | TCONS_00029221-exon-sc0000730-1510915933:63855..64092 | Clytia hemisphaerica | exon |
| TCONS_00029221-exon-sc0000730-1575043694:63855..64092 | TCONS_00029221-exon-sc0000730-1575043694:63855..64092 | Clytia hemisphaerica | exon |
| TCONS_00029221-exon-sc0000730-1491911889:70246..70840 | TCONS_00029221-exon-sc0000730-1491911889:70246..70840 | Clytia hemisphaerica | exon |
| TCONS_00029221-exon-sc0000730-1510915933:70246..70840 | TCONS_00029221-exon-sc0000730-1510915933:70246..70840 | Clytia hemisphaerica | exon |
| TCONS_00029221-exon-sc0000730-1575043694:70246..70840 | TCONS_00029221-exon-sc0000730-1575043694:70246..70840 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000730 | supercontig | sc0000730:57769..70840 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005576 | extracellular region |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0005576 |
extracellular region |
Blast
BLAST of TCONS_00029221 vs. Swiss-Prot (Human)
Match: GAPR1 (Golgi-associated plant pathogenesis-related protein 1 OS=Homo sapiens GN=GLIPR2 PE=1 SV=3) HSP 1 Score: 97.0561 bits (240), Expect = 1.380e-23 Identity = 60/148 (40.54%), Postives = 80/148 (54.05%), Query Frame = 3
Query: 483 HNKRRALHHNTPPLKWNQDLADGAQKWAEKLIKEHDGKLMHCKERGNDVGENLFVAMSTETHDESDLAVKTLDKWYGEIKDYNFSKSTYTSKAGHFSQVVWAGSQQMGVGYAQRKIGQFNTVVVCGRYHPAGNMNMEGYFKNNVFPPK 926
HN+ R H PPLK ++L AQ+++E L K RG GENL A +T E D+WY EIK+YNF + +TS GHF+ +VW +++MGVG A G + V RY PAGN+ EG+F+ NV PPK
Sbjct: 17 HNEYRQ-KHGVPPLKLCKNLNREAQQYSEALASTRILKHSPESSRG-QCGENLAWASYDQTGKE------VADRWYSEIKNYNFQQPGFTSGTGHFTAMVWKNTKKMGVGKASASDG---SSFVVARYFPAGNVVNEGFFEENVLPPK 153
The following BLAST results are available for this feature:
|
