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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97204_cuf11 >transcript:BL97204_cuf11-protein ID=transcript:BL97204_cuf11-protein|Name=transcript:BL97204_cuf11|organism=Branchiostoma lanceolatum|type=polypeptide|length=329bp
RKSCHTGIGKTSGWIIPTGWLVDQDFVHTDGQTSLVQAVGHFFSQSCVPG
AKSPEYDPQNTNPSNLCSLCAGAGEDHCVRNKNEPYYGYAGAFRCLAEGS
GDVAFINHLTVQDNTDGHNPENWAAGLRSNEFELLCTDGSRRPVDQWREC
SLARVPSHAVMTSNDRNQEWVDRAVQLLKNTQDMFGTDENERGFQMFDSA
SFGGHDLLFRDDTHHLVEVGSKDSWEKWLGQEYLRCIRSHHAVEPVQPHS
TLRWCTISSQEQQKCQEMSQHVSRNLNHRLECVQGQSSEDCMYKISHHQA
DVITLDGGDIYTAGSEHNLVPVMGEDYGN Run BLAST on NCBI mRNA from alignment at Sc0000043:1265847..1268209- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97204_cuf11 ID=transcript:BL97204_cuf11|Name=transcript:BL97204_cuf11|organism=Branchiostoma lanceolatum|type=mRNA|length=2363bp|location=Sequence derived from alignment at Sc0000043:1265847..1268209- (Branchiostoma lanceolatum)
GGCGTAAGTCCTGCCACACCGGTATCGGCAAGACGTCCGGCTGGATCATC
CCCACCGGCTGGCTGGTAGACCAGGACTTTGTTCACACCGATGGTCAGAC
TAGTCTGGTTCAGGCTGTGGGACACTTCTTCAGCCAGAGCTGTGTGCCTG
GTCAGTATGTCATTCTTGTAGTCTTGGATTACTTCTTGTTAGCAGGATCT
GTTTAGTCCAGAATGAGAACTTTTAAAGAAAAAGTTCTACACCTCTATAT
TAGTCATTATTGGCACTTAAATGTTAACTGCATGTAAATGTTTTCAGCTA
GACGAACATTTGATATCTTGAAATGGTTTCCATCAAACCTTGTAGATTCG
GCACTGAATATACCTCTATTTACACAAAGGTGCCAAGAGCCCTGAGTACG
ATCCCCAGAACACCAACCCCTCCAACCTGTGCTCCCTGTGTGCTGGTGCT
GGAGAGGACCACTGTGTGAGGAACAAGAACGAGCCGTACTACGGATATGC
TGGGGCATTCAGGTATTCAGTCATTCTTTCAGTTATTTTACCACCAGAAC
ATAGCTCAAGTTCGTGATCTGTTTGTCAGGTGTTCCTTGATACATACAGG
CTCATGGTTTGATTTGCAAATATTTGAATGGATTTATGATGTTCACATGA
TTATCGATAGTTTGCTAAACCTAATCTTGATATGTGGTTGTCCCCTCCAG
GTGCCTTGCTGAGGGATCCGGTGATGTTGCCTTCATCAACCACCTGACCG
TCCAGGACAACACTGATGGACACAACCCTGAGAACTGGGCCGCTGGCCTG
CGCTCCAACGAGTTTGAGCTGCTGTGCACGGATGGTTCCCGCCGTCCCGT
GGACCAGTGGCGCGAGTGCAGCCTGGCCCGTGTTCCGTCCCACGCTGTGA
TGACGTCCAACGACAGGAACCAGGAGTGGGTGGACAGGGCAGTGCAGCTG
TTGAAGAACACTCAGGTGAGAAATCTGAAGAATCTGGGTAAAATTGAGTA
CTGTAAATTCATTTACATTTGCGGTGGTTTTATGTTGCAGTTGGAGGGGT
AAGAAGGTTTTGGCTGTGTTATAAATTCTCAGTTTAAACAATTCTACAGT
AGAGTAGTCATAAAAAGGAGACATATTTACGGTGCCATGACTTTGCAGTA
CAGCGACCACTGCGAAAAACCACAAAATTAAACCACTGCAAAAGTTTCAT
GATTTACAGTGTATTGACCATATCCTCATCTGTGTATTGTAGAGCTGAAA
GAAGGTGTTTTGAAAATCACCATTTCCATCCACAGGACATGTTTGGTACG
GATGAGAACGAGCGTGGCTTCCAGATGTTTGACTCCGCCTCCTTCGGCGG
CCACGACCTGCTGTTCCGTGATGACACCCATCATCTGGTGGAGGTGGGCA
GCAAGGACAGCTGGGAGAAGTGGCTGGGACAGGAGTACCTGCGCTGTATC
CGCAGTCACCATGCTGTGGAGCCAGTCCAGCCTCACAGTAAGATCAAGTC
TTTATTTCGAGCCAATGCTTTGAAAAATGCAAGCATTCTGTTGTTGAATC
ATTGTGAATTTTTTAATTTTCAAGTGCTCACAGAAAGTACTATTTTGTTG
CACAGGCACCTTGCGCTGGTGCACCATCTCCAGCCAGGAGCAGCAGAAGT
GCCAGGAGATGAGCCAGCATGTCAGCAGGAACCTGAACCACAGGCTGGAG
TGTGTACAGGGCCAGTCTAGTGAGGACTGCATGTACAAGATCTCTCACCA
CCAGGTGAGGAACACAACAGTTTATATACATATTATGATACATCTTTTAC
AACAGAAAGCAGAATTAACTTCTAACATCCTGCAACGTACATTTATCAGG
CGCATGAAGAAAGCAGACATTTCAATGTCTACATTAAACAAATTTCATTT
GGGAAGTTTTGTGTTATGAGGATCAGCGTTTAACAGTGCCAGTAATAGAA
CAGTATAGGATGTATGTCTTACAGCAAAGATTCTTCTAGTGCCAACACAT
GTGTTAGTGTTTAATAATGAACTGCGACCTCAATGACGTCATCGCATAAG
GGTCATGTGACCCACCCGTCACTCCGTTCCATCGAGTCAGGCGGCCATGT
CACAACATCCATGTTCCTAATAAACATCTGAAGTATCAGGTAACATCCCC
GAGCAGAGTCACTCTTTTGCGCCTCTTGGCTACTTACTGACGTAGTTGCT
TGTTAGTTTATGGTACTGGGATACGTAACTGTACTTCACATGTTTTCATC
ATTACATTTGGTTCAATCTTCAGGCTGATGTGATCACCCTGGATGGGGGA
GACATCTACACTGCCGGATCTGAGCACAACCTTGTGCCGGTCATGGGAGA
GGACTATGGAAAT Coding sequence (CDS) from alignment at Sc0000043:1265847..1268209- >transcript:BL97204_cuf11 ID=transcript:BL97204_cuf11|Name=transcript:BL97204_cuf11|organism=Branchiostoma lanceolatum|type=CDS|length=987bp|location=Sequence derived from alignment at Sc0000043:1265847..1268209- (Branchiostoma lanceolatum)
CGTAAGTCCTGCCACACCGGTATCGGCAAGACGTCCGGCTGGATCATCCC
CACCGGCTGGCTGGTAGACCAGGACTTTGTTCACACCGATGGTCAGACTA
GTCTGGTTCAGGCTGTGGGACACTTCTTCAGCCAGAGCTGTGTGCCTGGT
GCCAAGAGCCCTGAGTACGATCCCCAGAACACCAACCCCTCCAACCTGTG
CTCCCTGTGTGCTGGTGCTGGAGAGGACCACTGTGTGAGGAACAAGAACG
AGCCGTACTACGGATATGCTGGGGCATTCAGGTGCCTTGCTGAGGGATCC
GGTGATGTTGCCTTCATCAACCACCTGACCGTCCAGGACAACACTGATGG
ACACAACCCTGAGAACTGGGCCGCTGGCCTGCGCTCCAACGAGTTTGAGC
TGCTGTGCACGGATGGTTCCCGCCGTCCCGTGGACCAGTGGCGCGAGTGC
AGCCTGGCCCGTGTTCCGTCCCACGCTGTGATGACGTCCAACGACAGGAA
CCAGGAGTGGGTGGACAGGGCAGTGCAGCTGTTGAAGAACACTCAGGACA
TGTTTGGTACGGATGAGAACGAGCGTGGCTTCCAGATGTTTGACTCCGCC
TCCTTCGGCGGCCACGACCTGCTGTTCCGTGATGACACCCATCATCTGGT
GGAGGTGGGCAGCAAGGACAGCTGGGAGAAGTGGCTGGGACAGGAGTACC
TGCGCTGTATCCGCAGTCACCATGCTGTGGAGCCAGTCCAGCCTCACAGC
ACCTTGCGCTGGTGCACCATCTCCAGCCAGGAGCAGCAGAAGTGCCAGGA
GATGAGCCAGCATGTCAGCAGGAACCTGAACCACAGGCTGGAGTGTGTAC
AGGGCCAGTCTAGTGAGGACTGCATGTACAAGATCTCTCACCACCAGGCT
GATGTGATCACCCTGGATGGGGGAGACATCTACACTGCCGGATCTGAGCA
CAACCTTGTGCCGGTCATGGGAGAGGACTATGGAAAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000043 | genome | Sc0000043:1265847..1268209 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97204_cuf11 |
| Biotype | protein_coding |
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