|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95328_evm0 >transcript:BL95328_evm0-protein ID=transcript:BL95328_evm0-protein|Name=transcript:BL95328_evm0|organism=Branchiostoma lanceolatum|type=polypeptide|length=243bp
MLAFFLATIALVGAQTVYDSTYQFGTLQTPIDKAVIFDCGTNPDRALKNP
KFVTDRDDLELPGSFTIIDAEVEVSKPISRPLYGKIDAWRTIYLFGGMAS
TIQLGCFYLSGKDYGVGSCDYGELCGILDLNTPLNDTTGAPTCWQEAIDL
GIPADKCSCEGIVAPKVYSLTNWYKTVDLTDLESGVLTFLAQGDYEIKMT
ATDANGNEEACLGIRVPVTEYVDPNETGGGWFFGKRKRSAKPL Run BLAST on NCBI mRNA from alignment at Sc0000021:1202241..1206882- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95328_evm0 ID=transcript:BL95328_evm0|Name=transcript:BL95328_evm0|organism=Branchiostoma lanceolatum|type=mRNA|length=4642bp|location=Sequence derived from alignment at Sc0000021:1202241..1206882- (Branchiostoma lanceolatum)
ATGTTGGCCTTTTTCCTCGCCACCATCGCCCTTGTAGGAGCTCAGACAGT
GTATGATTCTACCTACCAGTTCGGAACGCTTCAAACACCCATTGACAAGG
CTGTCATCTTCGACTGTGGAAGTGAGTAACAACCATTATCCGGCGGGTAA
CATAAATCCGCCACTTTGAAAAAACAGTGGGTTTGAGAGATCTCTAGTGC
AGCACCTCCCAGGTATGCACATTTAAGAAATACAGACGTGAATTATACTG
GGGGAAGTTGGGCTTTTCAGGGTGGCGGATTTATGTATCCTAATTATGTT
AGTAGATGCGATACTATTTTAGTAAAAACCAAAGTTTTGGGCGTTGAAAA
CTCCCATAAATGTCCTAATGTACCATATGGATTCTAGCTATTTTATCTGT
TTTGTTTTCAGTATCCTAAAATAATTGTCAGTAATTAATCAAATGATAAA
AGTCTAAATAACTGTATCAGATGACAGTTTATACTATGCATTTCCAAAGT
GTGCCAAATTCGGTCCTGTTGATGATAATTTCAGAAACCTTGAAAAACGT
TCTTTTTGCTCTTTGGCATCCATAATTCCATGTTTGCAGAAACACTTGGC
AGTTGAGTGGAGACTCTCCTTTTGCGTAAACTATTATCTGACGGACTGTC
ATTTGCTTCTTAACAGCATTTTGTTCCATCGATACCAATTCCAGCCAATC
CGGACCGGGCTTTGAAAAACCCCAAGTTTGTTACCGACAGAGATGACTTG
GAGTTGCCTGGCAGTTTCACCATCATAGACGCCGAGGTATGGCAGTTGTT
AACGTTAGACATTTAAAATAATAAAAAGTTGTTTTTAAAAATTTATAAGA
ATGTGCATGAAATGTATTACAAGACAGAGGGGGTTTTGACAGTGGCCCGT
AAGAGGGGTTCACACTTGTGCGTATTTCAAGTCCGTATGAGTTCCGTATT
TACATTTTTTGGCTTAAGTAAAGTTTGCGGGAAAGAAGATGTTTTTTTAC
TTCGATCCATCGTTGTGTTGCCCGTTATCGATCCGAAAAAACGACTTCTT
TAGCTTTGGCTGCAAACTTTACCTAAGCCACAAAAATATCTATACGGAAC
TCATGCATACTTCATCTACGCACAAGTGTGATTACCCATAGCTTCCTCAG
TATTGTCCTTTGCAATACATATATGATAATAATAATAATAATATATTGTA
CTTCAAATTTCGTTCCGCAGGTTGAGGTGTCTAAACCCATCAGTAGACCG
CTCTACGGTAAGATTGACGCCTGGAGGACTATCTACCTGTTCGGCGGGAT
GGCTTCAACCATCCAGCTGGGCTGCTTCTATCTCTCAGGAAAGGACTATG
GCGTGGGCAGTTGGTGAGTTCCTTTTTTCTGAAGATTCATGAAAAATGTA
GGAATATTTTTTGGGATCCGTGTGCGTGTGTGTGTGTGTGCGTCTGTGTG
TGTGTATGTGTGTGTATGTATGTGTGTGTATGTGTGTGTGTGTGTGTGTA
TGTGTATGTGTGTGTGTGTGTGTATGTATGTCACGGTGTGTTTGTGTGTG
TGTGTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTGTGTTTGTTTGTGTGTGTGTGTGTGTGTGTGTGTATGTG
TGTTTGTCTGCGTGTGTGTGTGCGTATCTGGAGCAATAACTTAAGATCCT
CTGGATGGATTATGATGATAATTGGTGTGTGGGTAGGTGATGTAGACGCA
AACGTCCAAATTTGTTTTGTAAACAATCCAAAGTTTAAAGTGTGTTACGG
TTGCGTTTAGACATCTAAAGAATCCAAAACAAGTCAATGTTGGAACCAGT
CGAAAAATCTGGATCTAAAGCCTTAAGATATTTCATAGTCAATTCAATAT
CTTATTTCAGAATCAAACTGGCAAAAGTACATTGGTGTAATACATATACG
TCTGAATTCTGTCGATTTTTACCAATATTATTACCAAGAACAAAATACTG
TACACATACTATTTTATGTATTATTTTATAGATAAGAATGAAAATGACGT
ATCACTTGAAAGTTCATCTGTGTTGGTAGAGTCATTATGTATCAAAGATA
AACTGCAATTTCCAATACAAGAAATTGGACTTACCCAAATTATCGACTGA
TCGACTCCAGTCTTAATCAAGAAATCATGGAAACTAAAATTTAACTTTGA
TACAAAATGGCGTATCCTTAACACGTCCCAACTTTCTTTCTTTCTTTCTT
CGTTTCAATCAACATGGCAGAAATACACATAATCTATACAATATACAGTC
ATGTACTTTTGAATTTTGTTAATCTTACAACTCATACCTATACAAAAATG
AAGGCGAAAACTGAACATTCGACACAACAACACTGTCGATGACACAATCT
GCATTTGTTGTACAGATGGATAGTATAGTGGAGAGTTGTCATCTCCATGA
AAAATGTTTTGAATGTGTTTGTTTGTGTGTGTTTGCGTGTGTGTTTGTGT
GTGTGTATGTGTGTGTGTGTGTGTTTGTGTGTGTGTCCGGATGCTTGTAG
TCAGCATAACTCAAGAACGTCAGGATGGATTGCAAAGATATTTGGTATGT
GGGTAGGTCTTGGGAGAACAAAGGTCAAGGTCGATTTTGGGCCGCCTAGT
ATCTGACACTGGAACTGCATTGGCGTTTCTGTCAAAATCTTCCAAGGAGA
TTAAGTGAACAAAGGAACGACAGATTTCCGTGTTATTTTGCAGGTAGCTC
TGGCAGAGACGTACACAATGAAGTGCAAATTATGCAAATTGGGACTTAAT
ATGTATTTCATTTGAGGTCTCCGAACTCTTGTTGAGTAATGGTTTGAATG
TGTTTACAGTGATTATGGTGAACTCTGCGGAATTCTGGATCTCAACACGC
CGCTGAATGACACCACGGGCGCACCAACCTGCTGGCAGGAGGCCATAGAC
CTGGGCATCCCGGCAGACAAGTGCTCGTGTGAAGGTATCGTCGCACCCAA
GGTGTACAGTCTTACCAACTGGTACAAGACTGTGGACCTGACCGACTTGG
AGAGCGGTGTTCTCACCTTCCTCGCACAGGTAGGTCAAGGAACAAAGCAT
TAGACAAAGAAGAAAACAAAAGTAAAAGTATAAAACGTTAGTCAGAGAAC
ATAACGTTAGTCAAAGAACGAAACATCAGTCAGAGAACAAAACGTAAGTC
AAAGAACGAAACATCAGTCAAAGAACGAAACATCAGTCAAAAAACAAAAC
ATTAGTCAAAGAGCAAAACATTAGTCAAAGAACAAAACATCAGTCAAAGA
CGAAAATTAGTCATGGAACAAAACATTAGCCAAAGAATATAACATTAATC
AAGGAAGAAAAAAAACAGTAAAAGTAACAAAAAATTAGTCAAAGAACATA
ACATTAGTCAAAGAAGAAAAAAACCCAGTAAAACAACAAAACATTAGCCA
AAGAACATAACATTAGTCAAAGAAGAAGAAATATAATTAAACATTAGTCA
AAGAACATAACATTTAAAATGTACTTTCTTTCAAATCGTATTGATTCAGA
ACAAGAACTTGAAGTAGATACTGAATGTAGCAGACTACAAAAAATAGTGC
TCTTAAGATTCAGTCAGAATTTGCTTGGATAATGTGGTGATTTGAATCAA
GTTTTACATGCCACGGTTTTTTTCTTCGACATTTAAAGTGGATTTCATCC
TTCAAATCATACCGATTCAAATCAAGATTTATTGTAGATAAATCTAGAAC
TGTCAAGATCGTGGCCCATTTTGTTTAGATCTTAGGTGGTTTCAATATAT
TTTACATACATCTCATATGTCAAGACAACAATATCGCTGTAACTTCAGCA
CACAAAATAATGCGTCGTCACTGATAATACCTGACGTCATCACAGAAAAC
ACTGACGTCATCACAAAAATTTCTGTCGCCTAGAACTATGGCATCCCACT
TCTTTTAAATAGAAACTATATGGTTCTATAAAAGCTATACTCTACACACC
ATTTGCACGCTAATGTTGGCTATTATTGAATCGCAGGGAGACTACGAGAT
CAAAATGACGGCAACAGACGCTAACGGAAACGAGGAGGCGTGTCTCGGCA
TCAGGGTGCCGGTGACAGAGTACGTGGACCCCAACGAGACCGGCGGTGGC
TGGTTCTTTGGCAAGAGGAAGCGCTCAGCGAAGCCGCTGTAA Coding sequence (CDS) from alignment at Sc0000021:1202241..1206882- >transcript:BL95328_evm0 ID=transcript:BL95328_evm0|Name=transcript:BL95328_evm0|organism=Branchiostoma lanceolatum|type=CDS|length=3660bp|location=Sequence derived from alignment at Sc0000021:1202241..1206882- (Branchiostoma lanceolatum)
ATGTTGGCCTTTTTCCTCGCCACCATCGCCCTTGTAGGAGCTCAGACAGT
GTATGATTCTACCTACCAGTTCGGAACGCTTCAAACACCCATTGACAAGG
CTGTCATCTTCGACTGTGGAACCAATCCGGACCGGGCTTTGAAAAACCCC
AAGTTTGTTACCGACAGAGATGACTTGGAGTTGCCTGGCAGTTTCACCAT
CATAGACGCCGAGGTTGAGGTGTCTAAACCCATCAGTAGACCGCTCTACG
GTAAGATTGACGCCTGGAGGACTATCTACCTGTTCGGCGGGATGGCTTCA
ACCATCCAGCTGGGCTGCTTCTATCTCTCAGGAAAGGACTATGGCGTGGG
CAGTTGTGATTATGGTGAACTCTGCGGAATTCTGGATCTCAACACGCCGC
TGAATGACACCACGGGCGCACCAACCTGCTGGCAGGAGGCCATAGACCTG
GGCATCCCGGCAGACAAGTGCTCGTGTGAAGGTATCGTCGCACCCAAGGT
GTACAGTCTTACCAACTGGTACAAGACTGTGGACCTGACCGACTTGGAGA
GCGGTGTTCTCACCTTCCTCGCACAGGGAGACTACGAGATCAAAATGACG
GCAACAGACGCTAACGGAAACGAGGAGGCGTGTCTCGGCATCAGGGTGCC
GGTGACAGAGTACGTGGACCCCAACGAGACCGGCGGTGGCTGGTTCTTTG
GCAAGAGGAAGCGCTCAGCGAAGCCGCTGTAAATGTTGGCCTTTTTCCTC
GCCACCATCGCCCTTGTAGGAGCTCAGACAGTGTATGATTCTACCTACCA
GTTCGGAACGCTTCAAACACCCATTGACAAGGCTGTCATCTTCGACTGTG
GAACCAATCCGGACCGGGCTTTGAAAAACCCCAAGTTTGTTACCGACAGA
GATGACTTGGAGTTGCCTGGCAGTTTCACCATCATAGACGCCGAGGTTGA
GGTGTCTAAACCCATCAGTAGACCGCTCTACGGTAAGATTGACGCCTGGA
GGACTATCTACCTGTTCGGCGGGATGGCTTCAACCATCCAGCTGGGCTGC
TTCTATCTCTCAGGAAAGGACTATGGCGTGGGCAGTTGTGATTATGGTGA
ACTCTGCGGAATTCTGGATCTCAACACGCCGCTGAATGACACCACGGGCG
CACCAACCTGCTGGCAGGAGGCCATAGACCTGGGCATCCCGGCAGACAAG
TGCTCGTGTGAAGGTATCGTCGCACCCAAGGTGTACAGTCTTACCAACTG
GTACAAGACTGTGGACCTGACCGACTTGGAGAGCGGTGTTCTCACCTTCC
TCGCACAGGGAGACTACGAGATCAAAATGACGGCAACAGACGCTAACGGA
AACGAGGAGGCGTGTCTCGGCATCAGGGTGCCGGTGACAGAGTACGTGGA
CCCCAACGAGACCGGCGGTGGCTGGTTCTTTGGCAAGAGGAAGCGCTCAG
CGAAGCCGCTGTAAATGTTGGCCTTTTTCCTCGCCACCATCGCCCTTGTA
GGAGCTCAGACAGTGTATGATTCTACCTACCAGTTCGGAACGCTTCAAAC
ACCCATTGACAAGGCTGTCATCTTCGACTGTGGAACCAATCCGGACCGGG
CTTTGAAAAACCCCAAGTTTGTTACCGACAGAGATGACTTGGAGTTGCCT
GGCAGTTTCACCATCATAGACGCCGAGGTTGAGGTGTCTAAACCCATCAG
TAGACCGCTCTACGGTAAGATTGACGCCTGGAGGACTATCTACCTGTTCG
GCGGGATGGCTTCAACCATCCAGCTGGGCTGCTTCTATCTCTCAGGAAAG
GACTATGGCGTGGGCAGTTGTGATTATGGTGAACTCTGCGGAATTCTGGA
TCTCAACACGCCGCTGAATGACACCACGGGCGCACCAACCTGCTGGCAGG
AGGCCATAGACCTGGGCATCCCGGCAGACAAGTGCTCGTGTGAAGGTATC
GTCGCACCCAAGGTGTACAGTCTTACCAACTGGTACAAGACTGTGGACCT
GACCGACTTGGAGAGCGGTGTTCTCACCTTCCTCGCACAGGGAGACTACG
AGATCAAAATGACGGCAACAGACGCTAACGGAAACGAGGAGGCGTGTCTC
GGCATCAGGGTGCCGGTGACAGAGTACGTGGACCCCAACGAGACCGGCGG
TGGCTGGTTCTTTGGCAAGAGGAAGCGCTCAGCGAAGCCGCTGTAAATGT
TGGCCTTTTTCCTCGCCACCATCGCCCTTGTAGGAGCTCAGACAGTGTAT
GATTCTACCTACCAGTTCGGAACGCTTCAAACACCCATTGACAAGGCTGT
CATCTTCGACTGTGGAACCAATCCGGACCGGGCTTTGAAAAACCCCAAGT
TTGTTACCGACAGAGATGACTTGGAGTTGCCTGGCAGTTTCACCATCATA
GACGCCGAGGTTGAGGTGTCTAAACCCATCAGTAGACCGCTCTACGGTAA
GATTGACGCCTGGAGGACTATCTACCTGTTCGGCGGGATGGCTTCAACCA
TCCAGCTGGGCTGCTTCTATCTCTCAGGAAAGGACTATGGCGTGGGCAGT
TGTGATTATGGTGAACTCTGCGGAATTCTGGATCTCAACACGCCGCTGAA
TGACACCACGGGCGCACCAACCTGCTGGCAGGAGGCCATAGACCTGGGCA
TCCCGGCAGACAAGTGCTCGTGTGAAGGTATCGTCGCACCCAAGGTGTAC
AGTCTTACCAACTGGTACAAGACTGTGGACCTGACCGACTTGGAGAGCGG
TGTTCTCACCTTCCTCGCACAGGGAGACTACGAGATCAAAATGACGGCAA
CAGACGCTAACGGAAACGAGGAGGCGTGTCTCGGCATCAGGGTGCCGGTG
ACAGAGTACGTGGACCCCAACGAGACCGGCGGTGGCTGGTTCTTTGGCAA
GAGGAAGCGCTCAGCGAAGCCGCTGTAAATGTTGGCCTTTTTCCTCGCCA
CCATCGCCCTTGTAGGAGCTCAGACAGTGTATGATTCTACCTACCAGTTC
GGAACGCTTCAAACACCCATTGACAAGGCTGTCATCTTCGACTGTGGAAC
CAATCCGGACCGGGCTTTGAAAAACCCCAAGTTTGTTACCGACAGAGATG
ACTTGGAGTTGCCTGGCAGTTTCACCATCATAGACGCCGAGGTTGAGGTG
TCTAAACCCATCAGTAGACCGCTCTACGGTAAGATTGACGCCTGGAGGAC
TATCTACCTGTTCGGCGGGATGGCTTCAACCATCCAGCTGGGCTGCTTCT
ATCTCTCAGGAAAGGACTATGGCGTGGGCAGTTGTGATTATGGTGAACTC
TGCGGAATTCTGGATCTCAACACGCCGCTGAATGACACCACGGGCGCACC
AACCTGCTGGCAGGAGGCCATAGACCTGGGCATCCCGGCAGACAAGTGCT
CGTGTGAAGGTATCGTCGCACCCAAGGTGTACAGTCTTACCAACTGGTAC
AAGACTGTGGACCTGACCGACTTGGAGAGCGGTGTTCTCACCTTCCTCGC
ACAGGGAGACTACGAGATCAAAATGACGGCAACAGACGCTAACGGAAACG
AGGAGGCGTGTCTCGGCATCAGGGTGCCGGTGACAGAGTACGTGGACCCC
AACGAGACCGGCGGTGGCTGGTTCTTTGGCAAGAGGAAGCGCTCAGCGAA
GCCGCTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000021 | genome | Sc0000021:1202241..1206882 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95328_evm0 |
| Biotype | protein_coding |
|
