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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL75915_cuf2 >transcript:BL75915_cuf2-protein ID=transcript:BL75915_cuf2-protein|Name=transcript:BL75915_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=101bp
QTLAGRHIRLRLTRPKLCVSTFGNRMQEQNRGKWRRGRRQLLASIEIRRH
NGTRHRKSTAIHTQQRLRWTGKASSNRKGTWLLCATEAVMSVCCVTRDDN
N Run BLAST on NCBI mRNA from alignment at Sc0000025:1843448..1851352+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL75915_cuf2 ID=transcript:BL75915_cuf2|Name=transcript:BL75915_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=7905bp|location=Sequence derived from alignment at Sc0000025:1843448..1851352+ (Branchiostoma lanceolatum)
CAGACACTGGCCGGGCGGCACATCAGGCTGAGACTGACTAGACCAAAGCT
TTGTGTCTCCACATTTGGTAAGCAGAATTCTCTTTAATTATTCATATAAT
ATCTAAATTTAATCAGCCATATATGATTCATTAATGGCGTGACTGTAGGG
AAGAGGAATGAGGAAACTTTTGGTTAGTTGTTGTTCTTCTCGAAAATTCG
CCGTTTAGACAATGGTAACGGACGAGACATATACTTTAACTACGTCTCCT
TTTTCGTCTGAGAAACCTTGACTTTTCTTTGCTCTTTTACTTAAATAGGA
TCGCGTCTATTTTACAACGATGTAAGGGTATGCATTTAGAACTTTAGTGC
ACCTAATAGTTTTGTTTAAGACATTGTAAGACGTGGATTTCCTTCGAGAC
AAAAACTGGGGCACCATTGAAAAGTGTGTCAGCCAAAATTGTACAAGGAA
AGCATATGGTTATCTTTAATGATTGTTGGGCGGGTGCTAGACATAGCGGT
ATGAATCACACTCGAATGAGTCACTATGGGGGAGGGTGGGCTTGCAGTAC
GTCTGGAAAAATAAAACCCCGAATTTACCGCCATTTTTGCCTGATGCTGA
AAACAAGTGTTATCAATTTTGTTTAGAGAGGTTCAAGTGAAAATTTCCTT
TAATGGTTTGATCGTATGAGCGGAATTTGAGGGGAGAAATTTTATTTCCG
TGTTGGGTTCTTTGTTTTGACTGGTTGTGGGGCTGAAAATAGCGGCAAAT
TCGTCGGTGGGTGAGTCATACCCGGGAATGAGTCACCGGTTCCTGGGGAC
GAGACGGGCGGTATGGCCGCCATTTTGGGTAGAGGTAGGCTCGTACACCA
GACATTGTCGACGAGTTTGAAAATAGCTGATTAACAGTCAGAGTCACAAA
TTACAGTTTCATTTCAAGCAAGAACTGCGAGGTTAAATGTGTCATTCCTG
CTTATTGGTGTAGTGAGGAGCTAGACTTTTTTCTTCAATGTCGGTACCCT
TAGCTGGAGGCTGATGTTTTAGACTAATTTCATAGTTGGCATTCGATACT
CTCACATGTGAATGTGTTGAGTAATAGGTCAAAAAGCAAGGCGGGGATGG
TTGACATGCACTAGGGGTGTAGGGTTTACCAGTATTTCATTTGCTGGAAA
CATATGGGGCTACTTAAGGGTTTATCGAGCACCACGGAGTGTGCGTTTTT
GATAGGGGTTGGTGAATAACTATCGAATAGTGCACGCCTTGGTCGTCTTT
GTTGATCAGAGGGTCGCTGAATTTCAAAAATCTGGCGTCAGAGACTCCAG
CGTACTTTTTAACCTGAAAATCAACCCCGTCACATTGAACGGTGCTCAGG
AATCTGTGAACATCGCGCGATGATCGAGAGAACGGCGCATAACTGCAGAA
TATGTATTTAGAGCTCGCAGACTTGGATAATTTTTTCTGCTGTGTGACAT
GGGCATTAGCCACGGTTGAAATTTGAACATAACGTTTGCAACAAAATAAT
AGATGCCCATTGAGCCTATAGCTAGCATACTATCAGTTTGAAGTTTAGAA
CATAAGAAATTCTGGTTCCTCCCGTATTCAGCTTTTTTCTAAGTAGACCG
CGCAGAATGGCCCCGCCTATCATTTCTTCTTTGAACAAGAGTGAATACAA
ACAATGGTCTTCCTGTATGCGCTTGGTGGATCGAAATGGCGAGATTTCAA
ATGTGACCTTGTAGTCGAGCATACACACCTATGAAATTCTTAAGACTTCA
GTTCTTCAACAGGGCATTCTATAGCTTTTTTTTCAACTCATTGACAACTT
TTTGATTGTTTCTTTGTACTTTCGAGATAAACCCTTTAGAAATTAAATCA
TTTTGTTTTGGGTGCGGTTCAGGCGGTTCCAACTAAATCGCGATCCTGGC
GGAAGTTGAATGAATTACAGTCAATTTGACCGTGGCAAATAAACAATGAC
TTCTCGGAAGCCGTGAGTTTCGGGACGGTACCAAATGAAATCCTTGGTGC
TGTCCTGAAAGTTCACAGTTCTTTTTCAAAACTTTGTCGTCTCTCATTTT
AATTTCTTAGCCAGTTTGTCACTTTTGTTATCAACCTTCTTTGATGAGAA
ATAATAATCTAGGTTTTCACGATTTTTCTGGTTTGCCCTTTGGCGTTCTG
ACGAGTCGGCAGTAAAGAAAAATGCATCCCTGAAACACAAGAGGTTGCGA
CGTTGCCTCTGGCATAAAATTATGACGTCTTGGGTTTTGACGTCATGACT
TTGTGGGTACCAGAGGCCATACACGTATTTCAGTCAAACTTACATTCATT
CTTAACAAACATTAATATGTCAGGTTTTCAAATATTTGATATGATTGCTC
CAAAGAAAATTCTTCAAATATCATTTACACTGTTGAGTTTGGCACAAAAT
TGTGCTTCACATACCAAAGTGTGAGTGGTTCAAAGATTACGTCAAAGAAA
ATGTCACCTGTGTAAACCGCAAGGTCATCTGAGGGTGACTGTTAGGGGTG
GGGATGGGTGGGGTACGGGTCAAATTAAGGGCTGGGCCCGTCATTTTGAA
AGGTCAAATGGGTTCAGTCATCATACCTATAAAGGTCACTGAACGCTTCG
TTCCATCAGCAAAGAGTATATTTCACTAGGCTGTGTGTGTGTGTGTGTGT
GTGTGTGTGCCTGTGTGTGTGTGTGTGTGTTTGTGTGTGCTTGTGTCTGT
GTGTGTGTGTGTGTCTGTGTGTGTGTGTATGTGTGTTTGTGTGTGCTTGT
GTCTGTGTGTGTGTGTGTGTCTGTGTGTGTGTGTGTGTGTGTGTGCGTAT
GTTTTTGTGTTCGCGCTTATTTGTGTGTGCACGTGTGTCGTTTGTGTCTT
GTGCGCATGGCTCTTAGCTTCTTACAGCATAGCTCATGCAAGAAGGCAAC
CACCCCCCCCCCCCCAAACTGAAATGGCTTAAAAATGGCCTTGGTGATAT
TGACGCACTTTGAGGACATGTAGTGCTTGCGTAGTGTTCATTCCTACGTA
TTGATACACGTCAGTTGTTTTTGAATCGTGGAATCAGGTTGTTGAAACGC
TTTCCAGCCGCTGGCAAGATCTAACGCCAACGGTGTCCATTGACGTCAGG
CCGCACCTACCTGTTGCACGGGTTGCCATAGCAAATAGCGACATCTGGCG
ACTTTATCCTAATATGCAGTCAAAACGACGTACCGTCAATTTTCTCAGTA
AAATGTAAAACAAAATCGTTTATCAATGCATTAATGTTGGACAAGAGAAA
ACATTTTACTAGATGCACAAAATTTGGCCCATATTCTTGTTTCTAAGTCG
GTCTTTTCTAAGTCATTGAATATTGGAATTCTTAAAGGCGGTAAGGGCTG
AGTTTGACGTCACTGGGCCGTGACGTAAGTCAAATGATCCCAATGAAATC
GCGGTTGTTCCTTTCAATACACTTCTCTATTGGAGCACAGGGAATTGTGT
TAACTACTAGCGTTTTTCCGCCCCTCTTTTGTGATCCTCGGGACATCACA
AACCTATGACATACATGCGGTCTTAATTGTTCTCTTTCAAATGGCCGTTA
ACAATTCACTTTGAAGTAGCGACATTAGTACGCTGATGAAACAGTCTACG
TCAAACTTAAATAGCATCGTCATTAATCATCGTGCATGTACGTAAGCGTT
TTGCAGAAGTGGGTTCTTCCTTTATATGGCATGCTATATAAGCAAGAGCA
ACAGTTAGAAAGTCCATTTCTAGCGGAACTGGTTCATGCATTGAGGTAGG
TAAGCCTGTATTAGCTGGACTAGCGAAAGGGGAATTGAAAAGGGTGTTTG
TATATAACCAGGCCAGATACAATGCCATTTACAGGCCTAGACCAGTGGCT
GGTTTGTTATCTTGTTGTTGTTTTTTTACTTCGCTGTTGGACAGACAAGG
ACGATGCTGCACTGCTCTTTCATGACTTATTTTAACTGTGCCACGTACAG
AGAACAGTATACTCATTTTTACACCTGGGTAGAGCGAGGAATGTCGTGTA
AAGCGCCTTTCCCAACGGCAACGGCACAACATCAGCGGCCAGGTGGTCAG
GGGATTCGAACCCGGGACCGCTGGGCTCTGGGCCGAACACCCTGTCGGCT
TTGGGGAGGACGGACTCCGTTGTTTTGTTGTCGAGACTGTATTCGTCCAT
GGTGGTATAGTCATTTGGTGAACAAATTCAAGGTCTTCTTTTATGTCAGT
GCAGTGCATTTTGGTTCAAAGTTCAAACATATCTTTTAGCACTGTTCATT
ATGTACGATTGTAGCACCTACTGAACTTCCTACAAAATCTGTATTTCCTT
GAAAAATTTGGTCCAGTTTGGAGACCTTGTTTGCTACAAGGAACATGTAG
GGTCCCTGGTTTGGTGAACATTTGTTATATTCACCAGTGAAAGTGAATTC
TTTTAGCGTAAGGACACAATTTTATATCTCCATATTTGGAAATGTACCTT
GAAGTTCCGGGTTGATGATGAGTATTATTTATTGTATATGCTGATATGAT
TAATAAACCTGAACACTATTTGTAAAACACTATGTGTAGATCAGAATGGG
AAGAACGTAGGATTCTTTTCTTAGCATTTCGAACATCTACTCAATACAAC
ACTGATTTCATACGGCGGCTAGTATCGAAGTCACCAAACCTTACAACGAA
AACAGAATGAATTGATATGTAAGATCATACACTTCATTTCATTGGGTATT
TAATTGGGTATTGCGATGGTACAAACATGCAGGGTCTCATGGCAAGAGAA
TATGGCCCTTCGATTATACCGAACAAGAAAGCGAAGATCTCATCGAGTCA
TATCATACCTCCGTGAAATAGTTAGAGTTTTTTTGTAAATTTCTTGTTTT
ATTCATCATTATGAATTCTTGCTAATTCTGTCTAGAGTAGAGTAGAGTAG
AGTAGAGTAGAGTAGAGTAGAGTAGAGTAGAGTAGAGTAGAGTAGAGTAG
AGTAGAGTAGAGTAGAATAGAGTAGAAACCTTTATTTTCCTTGGATGGCC
CTATGCTTTTTCCTACCTTCCTGCGAGGCTTTGTAAATATAAACCATGGC
CAACTTCACTTCCTGTCACTCAGATTAAACGACTTTAAACCTGGGACACA
CACAAAGACAAACAAACATACAGACAGACCGAAAGCAAATTATTCACCAA
ACGATTTCAACACGCTTCCTTTTTCTCAACAGGAAACAGGATGCAGGAGC
AGAACCGGGGAAAATGGAGAAGAGGAAGACGACAACTTCTCGCCTCCATA
GAGATCAGACGACACAACGGCACTCGTCACAGAAAGTCTACGGCCATTCA
CACTCAACAGCGTCTACGGTGGACCGGAAAAGCCAGTTCCAATCGGAAGG
GAACATGGTTATTGTGCGCTACAGAGGCAGTGATGTCAGTTTGTTGTGTG
ACACGAGACGACAACAACTAACATCACTGCCAAGGAAACGCACGAAAAGG
CTACGAAACTCGACAAGAGCGGCACCTAGCGGTTACTTCAAGAATAACAG
CCAGCTTAACACCAGCTCCGCAACAAGCCACTTACAACGGTTGTGCCCAT
TGGCAGTTTATTCTTATACCTTGTGAAAAAGGAATACTGCTACATATTTA
GTGAACGGCATTAAATGTAAAATGAGTATCCATAGCCTTAAAGATAGCCA
TGATATAGAGGGTTTTTATGGCACTGTGGACCAAAGCAACGATTCCGAAC
ACTTTAACTTTATCTTCTTTTTTTTTGTAAGCAGTAGTGACGTTATGAAA
TGGATGTGTAATATTATGACTTTTCGTCTGTACTGGATTTGATACTTAAC
GTAGATTAACTTTCCAATGATTTATAGTACAATACAATAGATAGTATTTA
CGGAGTTTCAAGAAAGCGAGTTTCCGAACTTTTTGTGTTAAGTTTACATA
TGGATGCACGTATATTTGAAAATGAATAGGTATACATATATATCACATAT
GTATATGTTTACCGTATATGTATATGTTCCCTGCGTTACTCTTGATCAAC
CCACCCCCTCTGAGTTTGCTGTTTATACATATACGCACGGACCCAAAAAC
ATAACATTCCTGGCGAAAATAAGGAAGGAAGAAAGGATGCTTCCTTGATA
AGAGATTTCTGGCAAGTGAGTGAGTGAGTGAGTACGTATTTGTTACTAAC
GCCGGCTAGCGATTGCTCAGAAAAGTGTCTATGAATATTATATTGCATAA
ACATCTCACCTCACCTCACCTAGTCCCATCCTCATCTTGAGGGTCGGGGA
CTATGGTCGTTTTCAGCATACACACACAGATCCCGAAACATAAGCTTCTT
GGCAAAAGTAAAGAAGGAAGGAAGGATGATTCCTTGATTGGAGAATTATG
GCAAGTGAGTGTTAACAACTGCGTAGGTTACTAACGCCACCTGGCGATTG
TCCACACACACACGTACGGATCTCGAAAACATAACATTATTGTTGAAAGC
AAAGAGGGAAAGAAGAATGCTTTCTTTATTGGAGATTCCTGGCAAGTGAG
TGTCTTCCAACTGTATCGGTAACGCCCCCTCCCGATTTCTTTGAAAAGTG
CACTAAATTAGACTCGCCAGATACGTATATTACGCACACCCAATCTGCCA
TTCGTTTTAACGTTGTAGTTTATGGCTCGTGCTATTACAATTGCGGCTTG
TATGGTGTCGCTTCTCTATTGAGCGGTTTCGCAATAACACGGACCGTTGG
CTCAATATCTTTCTATTTATAACAGGAACCCGTTTCCTGTGGTAATACAT
TAATCAGATTAAATCGCACGTATGCGAGCTGTCATGCCAGCGTATGTTCG
CCAAAATTGGATTACATTGTAATGCAATAGATCATAAATAATGCGGTTTT
TGTACAGCCTTATGGGCTATGGTCGCATACGTCAAAAAAGGTGATTGTAC
CGTTGGTATTGAGCAACATCTGACTAGGTAGACAGGCCACACCGTAGAAT
TTTTTTTGTGTGGCTTTTTAACGATCGAGAGTGAATGTATGATTTTTTTA
AAGCAGAATAATTCGACCCGTTTTACTAATTAGCTACGCAATATTGCTGT
TATGTATTGTCTGCATTTCAATTCATTTGTGAAATGCTAAAAGTACATTA
TCCTGAATTGGTTGATTGATTGGTTGATTGATCACTTAATTGATTGATTA
TTATATTATCTGGTATTATTTTCCAAGAGATTGAAAATGTCCAAGCCGGC
TTTGTATCAACCATTCTGATAGCATGTTTCCGTCATTTTGTATGATGTAA
ACATAGTAAATATAACATACTTTTCAAAATATTCATAGTAAGAAAAAACA
AAGAAAATGTGAGCAATGCTAAAGTTTCTGTTGAAATATTTGTTTTCTTA
TTTACCAAAATCATATTTTTGATAAGGCAAACCATACGTAATATACTGAA
TCAAAAATCAAGATTTCGTGGCCTTGCTGTCTTTCCAAAACCTCACGCCA
ATCAAACCTTTCTATACCTTCGTCGCTTAGCAACAGTGAATGTCACTAAG
GTGTTTTTACAAGGGATACCGGCAATGAAGAGAATGTAATTCGTATTACC
AACAGCAATAAGAAGAAACACGTCACAGGCACAAAGACGTCTCGTTAGGT
ATGCAAACAGCATACAATATCCTTTAATGAGTTGTTACGAGATATTCTTT
TGGCATGAAGACAAAATTGTACATCACATTCTATAGTATCTATGCAGCAG
CGTATTGAGACTTGCCTAGTTTACAGACGCATTTTTCAAGGACACTTGAA
TCAGCGGAGTTGAATTTTGGACTGTGTAAACAGAAATTTTGGGTACTCAA
GTCCCCCTTTTCTCAGACTCGACTTGAGCAACCTTAAGACCATGCTCAAG
TCGGAATTACGTGGCGTTTACAAATGTATGCAAATCCACGGAGTTGACTC
CAAGT Coding sequence (CDS) from alignment at Sc0000025:1843448..1851352+ >transcript:BL75915_cuf2 ID=transcript:BL75915_cuf2|Name=transcript:BL75915_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=612bp|location=Sequence derived from alignment at Sc0000025:1843448..1851352+ (Branchiostoma lanceolatum)
CAGACACTGGCCGGGCGGCACATCAGGCTGAGACTGACTAGACCAAAGCT
TTGTGTCTCCACATTTGGAAACAGGATGCAGGAGCAGAACCGGGGAAAAT
GGAGAAGAGGAAGACGACAACTTCTCGCCTCCATAGAGATCAGACGACAC
AACGGCACTCGTCACAGAAAGTCTACGGCCATTCACACTCAACAGCGTCT
ACGGTGGACCGGAAAAGCCAGTTCCAATCGGAAGGGAACATGGTTATTGT
GCGCTACAGAGGCAGTGATGTCAGTTTGTTGTGTGACACGAGACGACAAC
AACTAACAGACACTGGCCGGGCGGCACATCAGGCTGAGACTGACTAGACC
AAAGCTTTGTGTCTCCACATTTGGAAACAGGATGCAGGAGCAGAACCGGG
GAAAATGGAGAAGAGGAAGACGACAACTTCTCGCCTCCATAGAGATCAGA
CGACACAACGGCACTCGTCACAGAAAGTCTACGGCCATTCACACTCAACA
GCGTCTACGGTGGACCGGAAAAGCCAGTTCCAATCGGAAGGGAACATGGT
TATTGTGCGCTACAGAGGCAGTGATGTCAGTTTGTTGTGTGACACGAGAC
GACAACAACTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000025 | genome | Sc0000025:1843448..1851352 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL75915_cuf2 |
| Biotype | protein_coding |
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