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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL95968_evm2 >transcript:BL95968_evm2-protein ID=transcript:BL95968_evm2-protein|Name=transcript:BL95968_evm2|organism=Branchiostoma lanceolatum|type=polypeptide|length=275bp
MELPSSPQELVWAFGFLFAVDHNRLQCLYVLWSHPALSNTCESDEDCNGG
GYTCQEFPAVGRALCVPSSYVSWGGAGYNYPYYGYGYGYGYPGYGYGGYS
GYPYGYGYGYPYYGYGGYSGYSGYSGYGYPYNYGSYPYYGHPYLGYVGEG
TAEPGAGTPPGVGTPPVAGTPPSLTPEQEEEMRAKHEEMRKKAEEAMKKF
WENVARGEGPKPGNEDIVPMGGNRFPPPPQVPGQGQEQGQGQGRPPVMRG
PWIPPQAARGQQPPVVNMQDGIAED Run BLAST on NCBI mRNA from alignment at Sc0000246:360385..362384+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL95968_evm2 ID=transcript:BL95968_evm2|Name=transcript:BL95968_evm2|organism=Branchiostoma lanceolatum|type=mRNA|length=2000bp|location=Sequence derived from alignment at Sc0000246:360385..362384+ (Branchiostoma lanceolatum)
ATGGAGTTACCCTCTTCTCCTCAAGAATTAGTTTGGGCCTTCGGATTTTT
GTTTGCTGTTGACCACAACAGGCTACAGTGCCTATATGTATTATGTGTTG
GTAGTTTTCCTTTTTACCTCGCCCCTTGCGCGACATCTCTGTAAGCGTCA
CGCTACACCACGGTACTTACACAGTTTCCGCTGGCTTCTCTACAGGCACA
GTATTATCCCTATGGGTATGGTCATTACCCCTATGGGTCAGGGTCCCACC
CGGCCCTCTCCAACACTTGTGAGAGCGACGAAGACTGCAATGGCGGCGGG
TACACTTGCCAGGAGTTCCCTGCCGTAGGACGCGCCCTCTGCGTCCCCAG
TTCGTACGTAAGCTGGGGAGGGGCCGGCTATAACTACCCTTACTACGGAT
ACGGATATGGATACGGATACCCAGGATACGTAAGATCATCGATCTTTTCT
GTCAGCTAATTGACCATTTATCTATACTTTGTTACGTTCAAATGGATACT
ACTTTATATTGCCATACAGGCAATTTAGACATTCTGATCAATGACTGCTT
AACGTTTTGTCTCAATGACTATGAATATCAAAGACTTCATGGAGTTTTTT
TCTTGACAATTCATAATAAAAAGTTCTTTTTTACGTATCCTTTAGCTTCG
ACAACAGTATGAGGACATTCTTGTGGCAGTCGTGAATATGTTGTACAGGG
ATCAGCTGAATTGAAATTGTAATGTTTGGCCGACTCTATATCATATCCTC
GAAAAAAATTCAAACATTGAAAAAAAAAATTCCAAAACACATCTACCAGA
GACGGCACAGTTTGTTTTAACTATTAAAACTTACTATTTCATCCCTATTT
CCTACAGGGATATGGTGGCTATAGTGGCTATCCTTACGGTTATGGATACG
GCTATCCCTACTACGGCTACGGTGGCTATAGTGGCTATAGTGGCTATAGT
GGCTACGGATATCCCTACAACTACGGATCATATCCATACTACGGACACCC
ATACCTCGGAGTAAGTTGTATTGCTTGTATTAGATTAAGTAGATAATGAT
TCTACTATGTCATGAACTATATTTGATTTTCATAAGTTCTACAATAAAGG
ATGAGAAGAAATATTTCAAGATGTCGCCAAAAGAGAGTTGATAGAATATG
CAAAAGACCCTAGTTACTAGTATTGTTTAGTTCTTTTACATCCGATTGTT
GTGACAAATAGAAAGTTGTGAAATATTGTATCACACAGTACGTCGGTGAG
GGAACTGCTGAGCCTGGAGCAGGAACTCCTCCCGGAGTGGGCACTCCTCC
CGTAGCAGGAACTCCACCATCCCTGACTCCGGAGCAGGAAGAGGAGATGA
GGGCAAAGCACGAGGAGATGAGGAAGAAGGCGGAGGAGGCGATGAAGAAG
TTCTGGGAGAACGTGGCTCGCGGGGAAGGGCCAAAGCCTGGAAACGAGGA
CATTGTGCCCATGGGAGGAAACCGGTTCCCACCGCCTCCCCAAGTTCCCG
GTCAGGGCCAGGAGCAAGGTCAGGGTCAGGGGAGGCCACCGGTCATGAGA
GGACCGTGGATCCCCCCGCAAGCCGCAAGAGGACAGCAGCCCCCTGGTGA
GTGTCGCCTTAGCTTATTCAGCCCTTGCTGTTCAGGTCCCCAGAAGCTTG
ATGTCACCTATAAGTCAGGAGAATCGGGAACATCTTAATTCATGTTCATT
TATGCATATTTGCCAACATGGACCAATCGTTATTGGACTGATAACTGCCT
CTTTTCATGATGATTTTTAACTCATTAGCTAGAAGTTTAGGGCCTGAAGC
CCTAAGAGTGGGGCCTCTGACAGCGATGTATTTTGTAACAGTCCAAGTAT
TGCTGTAGCTCTTAATTTTGTTATACAACCGCCATTTTTTATAATAAATA
TTGCTACATAAAGAAAATGAAAAGTACTTAATAAATAAAACAACTCATTT
TCTTTTATCTGATAGTTGTGAACATGCAAGACGGCATCGCTGAAGACTGA
Coding sequence (CDS) from alignment at Sc0000246:360385..362384+ >transcript:BL95968_evm2 ID=transcript:BL95968_evm2|Name=transcript:BL95968_evm2|organism=Branchiostoma lanceolatum|type=CDS|length=4140bp|location=Sequence derived from alignment at Sc0000246:360385..362384+ (Branchiostoma lanceolatum)
ATGGAGTTACCCTCTTCTCCTCAAGAATTAGTTTGGGCCTTCGGATTTTT
GTTTGCTGTTGACCACAACAGGCTACAGTGCCTATATGTATTATGGTCCC
ACCCGGCCCTCTCCAACACTTGTGAGAGCGACGAAGACTGCAATGGCGGC
GGGTACACTTGCCAGGAGTTCCCTGCCGTAGGACGCGCCCTCTGCGTCCC
CAGTTCGTACGTAAGCTGGGGAGGGGCCGGCTATAACTACCCTTACTACG
GATACGGATATGGATACGGATACCCAGGATACGGATATGGTGGCTATAGT
GGCTATCCTTACGGTTATGGATACGGCTATCCCTACTACGGCTACGGTGG
CTATAGTGGCTATAGTGGCTATAGTGGCTACGGATATCCCTACAACTACG
GATCATATCCATACTACGGACACCCATACCTCGGATACGTCGGTGAGGGA
ACTGCTGAGCCTGGAGCAGGAACTCCTCCCGGAGTGGGCACTCCTCCCGT
AGCAGGAACTCCACCATCCCTGACTCCGGAGCAGGAAGAGGAGATGAGGG
CAAAGCACGAGGAGATGAGGAAGAAGGCGGAGGAGGCGATGAAGAAGTTC
TGGGAGAACGTGGCTCGCGGGGAAGGGCCAAAGCCTGGAAACGAGGACAT
TGTGCCCATGGGAGGAAACCGGTTCCCACCGCCTCCCCAAGTTCCCGGTC
AGGGCCAGGAGCAAGGTCAGGGTCAGGGGAGGCCACCGGTCATGAGAGGA
CCGTGGATCCCCCCGCAAGCCGCAAGAGGACAGCAGCCCCCTGTTGTGAA
CATGCAAGACGGCATCGCTGAAGACTGAATGGAGTTACCCTCTTCTCCTC
AAGAATTAGTTTGGGCCTTCGGATTTTTGTTTGCTGTTGACCACAACAGG
CTACAGTGCCTATATGTATTATGGTCCCACCCGGCCCTCTCCAACACTTG
TGAGAGCGACGAAGACTGCAATGGCGGCGGGTACACTTGCCAGGAGTTCC
CTGCCGTAGGACGCGCCCTCTGCGTCCCCAGTTCGTACGTAAGCTGGGGA
GGGGCCGGCTATAACTACCCTTACTACGGATACGGATATGGATACGGATA
CCCAGGATACGGATATGGTGGCTATAGTGGCTATCCTTACGGTTATGGAT
ACGGCTATCCCTACTACGGCTACGGTGGCTATAGTGGCTATAGTGGCTAT
AGTGGCTACGGATATCCCTACAACTACGGATCATATCCATACTACGGACA
CCCATACCTCGGATACGTCGGTGAGGGAACTGCTGAGCCTGGAGCAGGAA
CTCCTCCCGGAGTGGGCACTCCTCCCGTAGCAGGAACTCCACCATCCCTG
ACTCCGGAGCAGGAAGAGGAGATGAGGGCAAAGCACGAGGAGATGAGGAA
GAAGGCGGAGGAGGCGATGAAGAAGTTCTGGGAGAACGTGGCTCGCGGGG
AAGGGCCAAAGCCTGGAAACGAGGACATTGTGCCCATGGGAGGAAACCGG
TTCCCACCGCCTCCCCAAGTTCCCGGTCAGGGCCAGGAGCAAGGTCAGGG
TCAGGGGAGGCCACCGGTCATGAGAGGACCGTGGATCCCCCCGCAAGCCG
CAAGAGGACAGCAGCCCCCTGTTGTGAACATGCAAGACGGCATCGCTGAA
GACTGAATGGAGTTACCCTCTTCTCCTCAAGAATTAGTTTGGGCCTTCGG
ATTTTTGTTTGCTGTTGACCACAACAGGCTACAGTGCCTATATGTATTAT
GGTCCCACCCGGCCCTCTCCAACACTTGTGAGAGCGACGAAGACTGCAAT
GGCGGCGGGTACACTTGCCAGGAGTTCCCTGCCGTAGGACGCGCCCTCTG
CGTCCCCAGTTCGTACGTAAGCTGGGGAGGGGCCGGCTATAACTACCCTT
ACTACGGATACGGATATGGATACGGATACCCAGGATACGGATATGGTGGC
TATAGTGGCTATCCTTACGGTTATGGATACGGCTATCCCTACTACGGCTA
CGGTGGCTATAGTGGCTATAGTGGCTATAGTGGCTACGGATATCCCTACA
ACTACGGATCATATCCATACTACGGACACCCATACCTCGGATACGTCGGT
GAGGGAACTGCTGAGCCTGGAGCAGGAACTCCTCCCGGAGTGGGCACTCC
TCCCGTAGCAGGAACTCCACCATCCCTGACTCCGGAGCAGGAAGAGGAGA
TGAGGGCAAAGCACGAGGAGATGAGGAAGAAGGCGGAGGAGGCGATGAAG
AAGTTCTGGGAGAACGTGGCTCGCGGGGAAGGGCCAAAGCCTGGAAACGA
GGACATTGTGCCCATGGGAGGAAACCGGTTCCCACCGCCTCCCCAAGTTC
CCGGTCAGGGCCAGGAGCAAGGTCAGGGTCAGGGGAGGCCACCGGTCATG
AGAGGACCGTGGATCCCCCCGCAAGCCGCAAGAGGACAGCAGCCCCCTGT
TGTGAACATGCAAGACGGCATCGCTGAAGACTGAATGGAGTTACCCTCTT
CTCCTCAAGAATTAGTTTGGGCCTTCGGATTTTTGTTTGCTGTTGACCAC
AACAGGCTACAGTGCCTATATGTATTATGGTCCCACCCGGCCCTCTCCAA
CACTTGTGAGAGCGACGAAGACTGCAATGGCGGCGGGTACACTTGCCAGG
AGTTCCCTGCCGTAGGACGCGCCCTCTGCGTCCCCAGTTCGTACGTAAGC
TGGGGAGGGGCCGGCTATAACTACCCTTACTACGGATACGGATATGGATA
CGGATACCCAGGATACGGATATGGTGGCTATAGTGGCTATCCTTACGGTT
ATGGATACGGCTATCCCTACTACGGCTACGGTGGCTATAGTGGCTATAGT
GGCTATAGTGGCTACGGATATCCCTACAACTACGGATCATATCCATACTA
CGGACACCCATACCTCGGATACGTCGGTGAGGGAACTGCTGAGCCTGGAG
CAGGAACTCCTCCCGGAGTGGGCACTCCTCCCGTAGCAGGAACTCCACCA
TCCCTGACTCCGGAGCAGGAAGAGGAGATGAGGGCAAAGCACGAGGAGAT
GAGGAAGAAGGCGGAGGAGGCGATGAAGAAGTTCTGGGAGAACGTGGCTC
GCGGGGAAGGGCCAAAGCCTGGAAACGAGGACATTGTGCCCATGGGAGGA
AACCGGTTCCCACCGCCTCCCCAAGTTCCCGGTCAGGGCCAGGAGCAAGG
TCAGGGTCAGGGGAGGCCACCGGTCATGAGAGGACCGTGGATCCCCCCGC
AAGCCGCAAGAGGACAGCAGCCCCCTGTTGTGAACATGCAAGACGGCATC
GCTGAAGACTGAATGGAGTTACCCTCTTCTCCTCAAGAATTAGTTTGGGC
CTTCGGATTTTTGTTTGCTGTTGACCACAACAGGCTACAGTGCCTATATG
TATTATGGTCCCACCCGGCCCTCTCCAACACTTGTGAGAGCGACGAAGAC
TGCAATGGCGGCGGGTACACTTGCCAGGAGTTCCCTGCCGTAGGACGCGC
CCTCTGCGTCCCCAGTTCGTACGTAAGCTGGGGAGGGGCCGGCTATAACT
ACCCTTACTACGGATACGGATATGGATACGGATACCCAGGATACGGATAT
GGTGGCTATAGTGGCTATCCTTACGGTTATGGATACGGCTATCCCTACTA
CGGCTACGGTGGCTATAGTGGCTATAGTGGCTATAGTGGCTACGGATATC
CCTACAACTACGGATCATATCCATACTACGGACACCCATACCTCGGATAC
GTCGGTGAGGGAACTGCTGAGCCTGGAGCAGGAACTCCTCCCGGAGTGGG
CACTCCTCCCGTAGCAGGAACTCCACCATCCCTGACTCCGGAGCAGGAAG
AGGAGATGAGGGCAAAGCACGAGGAGATGAGGAAGAAGGCGGAGGAGGCG
ATGAAGAAGTTCTGGGAGAACGTGGCTCGCGGGGAAGGGCCAAAGCCTGG
AAACGAGGACATTGTGCCCATGGGAGGAAACCGGTTCCCACCGCCTCCCC
AAGTTCCCGGTCAGGGCCAGGAGCAAGGTCAGGGTCAGGGGAGGCCACCG
GTCATGAGAGGACCGTGGATCCCCCCGCAAGCCGCAAGAGGACAGCAGCC
CCCTGTTGTGAACATGCAAGACGGCATCGCTGAAGACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000246 | genome | Sc0000246:360385..362384 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL95968_evm2 |
| Biotype | protein_coding |
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