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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL82392_cuf0 >transcript:BL82392_cuf0-protein ID=transcript:BL82392_cuf0-protein|Name=transcript:BL82392_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=149bp
IVFQWFDCDGRSVPSYHVCDGVQDCLNGKDEINCVTRGWLERSTDWAIDS
TRSVPGYDLYNVLDGKDYSWIPDAFQGPWYITFDLLVPYMLSKISITNWG
DIDHDISAFKFQRSASSNPYIWEDVTVVTDAVGPPRQEFSGFSASSRFW Run BLAST on NCBI mRNA from alignment at Sc0000314:185244..191272- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL82392_cuf0 ID=transcript:BL82392_cuf0|Name=transcript:BL82392_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=6029bp|location=Sequence derived from alignment at Sc0000314:185244..191272- (Branchiostoma lanceolatum)
GATCGTTTTCCAGTGGTTTGACTGTGACGGGAGGAGCGTGCCAAGCTACC
ACGTCTGCGACGGTGTGCAGGACTGTCTGAACGGAAAGGACGAGATAAAC
TGTGTAACTCGAGGTGGGGGTAAACTTAAGAATCGTTATCATACTGCACA
CTCCATTTTGGTAAACCGAATTCTACTACAGAGTAATTAGGACTCAAAGG
ACCGTGTATCTCTGTTATATTGTATCTGTGATTCTGACCCTTACCTCTTC
CCTCATGACCTCAATGAAAAGCGGCCTACGTGCCGGTTTGAGCTTATCAT
GAATAAACAAAGGTTCAAACAAACAACCAAACAAACAAACAAACAAACAA
ACAAACTTGTTACGTTGATGAAGGTTAGACATCCAGGTAGTAAGATACGC
CAAAAATAGTTACTCAAGCAAATTTCAAACTTTTATCCAGTTGCTTGAGT
AACTATTTTTTGCCGAATTCTACTTGTGTATTTTAACGTTCTAGCGGCCT
GAAGACAACATATGTTCCTGCAGACCAAGTAGACTTACTCTCAGTGGGAA
TACACGGGCAGATTACAAAGCCATTTGAAAAATGAAATGAAATGTGACCC
ACATCCCTGAAGGGACCTTGGGTATAATCTCGGGCTGTTCGTGCATCTGC
AATGCGGCTTCGCCGCAGCTCGCGTTTTTAGCAAAGCACACCGGGCCACC
CCTACTCTTCTCGATAAGTGTGTTAGGTTCTTTTACGTGCAGAGGTTTGA
CGCTTGAGGCTTATGCCCGAAGCTCCCTCATACACGGGGCCGCCGGCTTT
ATGTCACCATCCGAAATGACGAATGAAATCCCTTACAACATGTCCGAGCT
GGGGTCGACCCTAGGATCGAATTCGGGCCCCAGGATCCACGGAATTTGAT
CCAGATGGCAAAGCAGCGGGGTTGCGTTACCGCTTTCGCCACGGGGACAT
GCTAGTATGATAGTATCAGACAAATGACATATCGGGGCATGTTAGAGATC
GCAGTGTGGTCAGGAGGGGGAACGACTCGAAGAATGTAATAATAATAATA
ATAATAATAACTTTATTGCACAACAATTGTACAAGATACAAAGTATGGCA
TCCACTGGTACATTATAAGATACCCTTCTATTAGGCTAATCAATCTATCT
AATACAATATGGTGTAGTAGTATGGGATGACAATGGCATTTTACAATCAT
TGCAGGAGTTTCTAACGTCTAGACATTCTTTGATATATTTTCCAATGTAT
ACCATGCAGGGGTTGTCACATGTCATTATGTACTTAAATTTGCTATTCAA
GTCCATTGAGATAAATACTGGTAAATCCGACGATAACATTGAGTATAGTG
AATCACGTATATCAAAATATTTGGGACATAGAATCAAAAAGTGATATTCG
TCTTCAATTACCTCTGGATAAAATGGACAAACCCTCTGGTCGATGTGTAT
ATGTCAGGCTAGAGACTGCGCCAGAGTCGCGGATGGTCCACACTGGTTAA
TCAAGTGCTCTCTCCCTTACTAACCACATACCCGAAGGTTAATTGCAAAA
CAGTGATAAGCAATATGCATACATGCTAACAGATCTATGTTAAGATCATC
CTGTCAATATGTCTTCGTTGACTAAAGGCAATGGAAGATAAAATGCCCAT
ATTTAGAATAATGAGTGGCCATGGGCTCGAAGATTTTAGAAGAAAAATAG
TAATTTGTGGGTTCTTAAGATTAGAAAATCCAGTGTAGATTGCAGACATT
CGATTAGACCAATTAAGAGGGGGTTGATTTGATATGATTTATTTGACTGT
AAAAAAGTACGGCCAGGGCTACCCAACTAGCCGAAGGCTATTACAAAGGG
TTAGCCCTGGGAACAGTATTCAAAGTTCATTACAAACGTTCACAAATCAC
GTCAAACAGACACATATATGCGTTCATAAAACGCCAAGCTTAAATACATA
GAAGAAACAAAATTAACAAAAAACAGCACAAAACTGAAGCGCATATGGTA
CAAATGCACGAGACTAGACTATATATAAAATCGTTGACAACGCCAAGCCA
AAACTGAGGTTCACATTACGTACTAGGTTATTTAAACACACAACAAGTTT
CAATTCATCATCTGTTTATCTTCCTGTTGGACCATGCAAGCACACCGTCA
GAATCTGTAATTAAATGAAATATTCACTCTTTGTGATGACTAATTTGATA
GCAAAGTAAATCAACGCCACATGCTGAATTACATACTTTGTTATAGTTCA
TCATTGAGTGCACTTAAGGTTTCCTCCCTGGCTAAATTGGCTTTTTGACT
TTTCATTGTTTTCTCATTAACAGATTAAGAAAGAACTGTAGCTGAACTGA
ATATTGACAGCTGGTCATGAAAGAATTCTAAATCTGTTTTTTTTTTACCA
AATGGATGACGTCATCAAATTTTATTGCCCTTAATATGATTTTTTTCAAA
GCTAAAATACAGCACTTTGGTACATAACACTGCAATGAAACTATGTTTTT
CATGTGCATAATGATCAAAGCTACAAACTTGGTTTCGCACAAATTGGTAT
CTACTTATCATCTGTAGTTATTAAAAATAATACTTTTACCTGATTAAAAA
AATCATTTTCTAATAACTATGGCCACTTCATAGATATCAATCTGTGCGAA
ACTGCGTTAACTTTATTCTTGAAATATTTCTTATCTTAAGATTGCTTAAA
GATTCATTAAAAGCATGTTTTATATTACGATTTATACATTAAAATCGGGT
ATAAAACTGGCACAGACAATTAACGTTGGGTAACATAAATTCGCCATTTT
TCCGATAATGGTTGACTGAAATCAATCTAGCAGAACAATAAACCATCCTT
TTTTCTATTATTCTGTCAGTATCATGTACTATCTTTGCACTAATCATATA
TATGGTAGATTTTGTCTCTAGTCGTGCTGACACCATAATATTTCAACTTG
AAACTACCGTCCGCCGCACGCACAATGACGGTGTTGTCGGACAGGTGTGA
ACATTATTTCGGGAGAGAAGATTCGTCTTGAATATCTTACCGCTAATTAC
ATTTTATACAGCAGCTATTCGTTCCATCCTTGGCTTGAGGAGAGTGCTAT
GGATATAGACGTGTCCAAGTAAAAAAAATACACGAAAAAACGGCCGTACC
GCACACATCAGGCCAGTTCGGGAACAACCCGTGTGTTGAGTCGGTAGAAC
TTCACTCAAAGTCGGCCCATCGTCATCATCGGGCAACGTGTAACGTTACA
TTATTCATGGGAAGTTAGCTGGATGCCGTAGCAATGGTTATACTACTATG
TCCATGTGTTCCTTGTTGTGTTAGGAGCAAACTTTGAGGAAAATATCGTC
TTCAGTCCACTATCACACGCAACATTTAGACAAAAAAGTGTTCCTCACAA
ACCTTTGTCGTCTGCCGAATAGCAGGATTCTGGGTAACGAACATGGCGGC
GGGAAAATACACGTGCCGTAGGTTGTAGCAACAAAGAGGAGTTTTGATGA
TTTATCACACTTAGAATCCAGTTGCAGGTTAGCAAAAGAGATTGTTATAA
GTTGTCTTGTAAATAATTGTGTTTAGCAGGCAGGAGATGTGACATTTGTC
TTATAAACCAGCGAAAAACCGTGCAGTGTGATTCTCCCACGAAGCCCCCA
CTCTGTCAATAAGGGACGGAGAGTTTTTGACGTCGCCAACTTCTAATGCA
ATATTTTTTTACTCTTCGGCAATGGTCAATATACCGAAAATGGGGCAATA
TGTCGCAAACGTCTGTCAGTTCCATCGCTAAATCGTTCTAGATGCCGTAG
AAAGCAATTGCACATGTCGGAATGGTGAAAAATCCGTACAAAGGTGTTGT
GCAATTATTGTGTATGCAAGCTGTGATAAGATTGCCCCTTGTCACCAACT
TACAGGAAGACACAGTGCAGCCCTCATACCAAACTTGTAATTGGAATTAG
TCTGTAATTGCTGTGCCATTATCAACAACGTGTAATGCAATGTTTATTCT
TGAAAGAAGTGAACTACTAACCAATCCGATAACAGGGTCAGATGAAGTAA
CTACTGTCATGCGGGTTGTGTAGATCATTGTCTAGCTGTCTGTCTGTTGA
AGACAAAATAGCGGGGTATTTCTGAGGAAAGACAATTCAGCCAGACAGTC
AGGACAGCAACAGTGGAGAGAACTTCAGTGGAGACAAAGTGAGCAGAGCT
AGCATTATGTAGTCACAGTCTCATGACTCAGGAAACTCCTGTGCCCAAAG
TACGCGAAACCATATTTCTGCGTTCTTCATGTGCTGTACAAACCCGGATC
GAACTTTAGTGTTTATTAGGTTAACATTTAATTGAAAACAGGGATAAAAG
ACTTGTTGGTTATAATACCATGTTTTATCACTTCAATTCTTTTTACATGC
TTTATGGTATTCAAATTTGAAAATGTGGATATCTTGTTTTTTGCCCGCCT
TGTTTTTTCGCCTGCGCGCACTAAATGTGGAGTCTGCAGAGGATGTCATC
CATAGAATTTACTTGCTGTGGCCTAAGTGTCATATTTGTCAAATCAACGG
GGTCGAAAAGGATAAATGATCCTTTGTATATATACAAGAAATGTACAAAA
ATGTCAAAGCAGGACACTTTTATATACCTGATGTCATGTAAGAACGAACA
TGCAATAGACAAAGTTTGTAGTCATGTTTCCAAATATTTAAAAAAGAGAG
AAGAAACTATTAGGTGATCAACATTAGTTTATCAATAGTCGACAGCTTGT
CTATCTTTTAGTTTGTCAATGTTAGAATGTAGCAGCTTATCAATTCATGT
TTTGCATTAGGCTTTTTATAGACCGCGTGTGGTCATCTGTGCATTTAGCC
CAGCTGGGCAGGAATATGCAATAAAGACTATTATTATTATAATAATACTA
CATATATGGTGGACCTCTGTGCAATGCATATGATATTCAAATCAAAAGGC
GATAAGTTCTTGCAATTGCACAAATATCACGCTCTTTTCACTAAATCAAC
TGATTCATTCTCAATTTCACAAAGGTTGGCTGGAAAGATCCACCGATTGG
GCGATCGATTCAACACGTTCGGTACCTGGGTACGATCTTTATAACGTTCT
TGATGGTAAAGACTACTCGTGGATACCTGATGCATTTCAGGGCCCCTGGT
ACATCACATTCGATCTTCTCGTGCCGTATATGCTTTCCAAAATCAGCATT
ACCAACTGGGGAGACATAGACCACGACATTTCAGCATTCAAGTTTCAAAG
GTCGGCACACAGTTATTTGTTTGTTTGGATTATTCACAAAAGTGAAGGAA
TGGCAAAACAGGTGCTTACGTACCTTTACATGTTGCCCTCCCACGCACAA
TACAATACATTCAAGTCTACAATTTCATATATATAAACATCAAATTCCTA
CAATATCATACATATAAACATGGTAACGTCAATTTACAATGAATAAGTAC
AATAACTGAATATATCATGATGCAGCATTAAGGAACTAGAGTTTTACAAC
CTCATACCTTCGCCAATAGTAGGGTGTTTATCATTGATTATACAAAAAGG
TCAATTGATCATCTTCTCCACCCAAATAACAGAAGTTGCCCAAAGTATGA
CAAGTTAATTTAAACATCCTCCCTAACAACGTTAAATGACAACGTGGTAG
TTAGCTTAGTTATTCTAGTAATAACTGTAAAACCATGTTAGCCACACATG
TAGTTATACAGTGTGTCCCTTTTGCTTTCCTTCCCGCTTGGAGTTCGGAC
TTATGTTCCGCTAGGTTTTTGTCATTCATAAGTTTGAGTGTGTTGTCAAA
TATTTTATTTTCCGTAATGTACAAGTGGTGGCTAGAATATAAGTTGTGTA
CAACTTAAGTCGGCCTGCACTTTGTCTTCGTCCATTTAATTGTATTATTT
GATGTTTCCTTGAAAAAAAGGTCGGCATCCTCTAACCCGTACATCTGGGA
AGACGTGACGGTTGTGACGGATGCGGTGGGACCCCCGAGACAAGAGTTTA
GTGGATTCTCAGCCAGCAGTCGATTCTGG Coding sequence (CDS) from alignment at Sc0000314:185244..191272- >transcript:BL82392_cuf0 ID=transcript:BL82392_cuf0|Name=transcript:BL82392_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1341bp|location=Sequence derived from alignment at Sc0000314:185244..191272- (Branchiostoma lanceolatum)
ATCGTTTTCCAGTGGTTTGACTGTGACGGGAGGAGCGTGCCAAGCTACCA
CGTCTGCGACGGTGTGCAGGACTGTCTGAACGGAAAGGACGAGATAAACT
GTGTAACTCGAGGTTGGCTGGAAAGATCCACCGATTGGGCGATCGATTCA
ACACGTTCGGTACCTGGGTACGATCTTTATAACGTTCTTGATGGTAAAGA
CTACTCGTGGATACCTGATGCATTTCAGGGCCCCTGGTACATCACATTCG
ATCTTCTCGTGCCGTATATGCTTTCCAAAATCAGCATTACCAACTGGGGA
GACATAGACCACGACATTTCAGCATTCAAGTTTCAAAGGTCGGCATCCTC
TAACCCGTACATCTGGGAAGACGTGACGGTTGTGACGGATGCGGTGGGAC
CCCCGAGACAAGAGTTTAGTGGATTCTCAGCCAGCAGTCGATTCTGGATC
GTTTTCCAGTGGTTTGACTGTGACGGGAGGAGCGTGCCAAGCTACCACGT
CTGCGACGGTGTGCAGGACTGTCTGAACGGAAAGGACGAGATAAACTGTG
TAACTCGAGGTTGGCTGGAAAGATCCACCGATTGGGCGATCGATTCAACA
CGTTCGGTACCTGGGTACGATCTTTATAACGTTCTTGATGGTAAAGACTA
CTCGTGGATACCTGATGCATTTCAGGGCCCCTGGTACATCACATTCGATC
TTCTCGTGCCGTATATGCTTTCCAAAATCAGCATTACCAACTGGGGAGAC
ATAGACCACGACATTTCAGCATTCAAGTTTCAAAGGTCGGCATCCTCTAA
CCCGTACATCTGGGAAGACGTGACGGTTGTGACGGATGCGGTGGGACCCC
CGAGACAAGAGTTTAGTGGATTCTCAGCCAGCAGTCGATTCTGGATCGTT
TTCCAGTGGTTTGACTGTGACGGGAGGAGCGTGCCAAGCTACCACGTCTG
CGACGGTGTGCAGGACTGTCTGAACGGAAAGGACGAGATAAACTGTGTAA
CTCGAGGTTGGCTGGAAAGATCCACCGATTGGGCGATCGATTCAACACGT
TCGGTACCTGGGTACGATCTTTATAACGTTCTTGATGGTAAAGACTACTC
GTGGATACCTGATGCATTTCAGGGCCCCTGGTACATCACATTCGATCTTC
TCGTGCCGTATATGCTTTCCAAAATCAGCATTACCAACTGGGGAGACATA
GACCACGACATTTCAGCATTCAAGTTTCAAAGGTCGGCATCCTCTAACCC
GTACATCTGGGAAGACGTGACGGTTGTGACGGATGCGGTGGGACCCCCGA
GACAAGAGTTTAGTGGATTCTCAGCCAGCAGTCGATTCTGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000314 | genome | Sc0000314:185244..191272 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL82392_cuf0 |
| Biotype | protein_coding |
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