transcript:BL67971_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL67971_cuf0
Unique Nametranscript:BL67971_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



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Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL67971_cuf0

>transcript:BL67971_cuf0-protein ID=transcript:BL67971_cuf0-protein|Name=transcript:BL67971_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=101bp
GHTNLILWMTSARALIFTCCHQKKKVTSSKATQNSGTCRLRLPQKASIVP
AYRKTGAYLWIGMPSMLAGGILRLHSCTRGSRRPASIAQTISNTTYPEWL
S
Run BLAST on NCBI

mRNA from alignment at Sc0001730:2243..2546-

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL67971_cuf0 ID=transcript:BL67971_cuf0|Name=transcript:BL67971_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=304bp|location=Sequence derived from alignment at Sc0001730:2243..2546- (Branchiostoma lanceolatum)
GGCCACACCAACTTAATCTTATGGATGACATCCGCGCGCGCATTGATTTT
CACCTGTTGTCACCAAAAAAAAAAAGTCACCTCCTCCAAGGCTACACAGA
ACTCCGGAACTTGCCGACTTAGATTGCCGCAAAAGGCTAGCATTGTGCCG
GCTTATCGGAAAACTGGGGCGTATTTGTGGATTGGTATGCCATCGATGTT
GGCTGGGGGGATTTTGCGTTTGCACAGTTGTACGAGAGGATCGCGGCGGC
CAGCGAGTATCGCCCAGACAATTTCAAACACGACCTATCCAGAGTGGCTC
TCAC

Coding sequence (CDS) from alignment at Sc0001730:2243..2546-

>transcript:BL67971_cuf0 ID=transcript:BL67971_cuf0|Name=transcript:BL67971_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=303bp|location=Sequence derived from alignment at Sc0001730:2243..2546- (Branchiostoma lanceolatum)
GGCCACACCAACTTAATCTTATGGATGACATCCGCGCGCGCATTGATTTT
CACCTGTTGTCACCAAAAAAAAAAAGTCACCTCCTCCAAGGCTACACAGA
ACTCCGGAACTTGCCGACTTAGATTGCCGCAAAAGGCTAGCATTGTGCCG
GCTTATCGGAAAACTGGGGCGTATTTGTGGATTGGTATGCCATCGATGTT
GGCTGGGGGGATTTTGCGTTTGCACAGTTGTACGAGAGGATCGCGGCGGC
CAGCGAGTATCGCCCAGACAATTTCAAACACGACCTATCCAGAGTGGCTC
TCA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL67971gene:BL67971Branchiostoma lanceolatumgene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL67971_cuf0-E1BL67971_cuf0-E1-1564476830-510707Branchiostoma lanceolatumexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL67971_cuf0transcript:BL67971_cuf0-proteinBranchiostoma lanceolatumpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0001730genomeSc0001730:2243..2546 -
Properties
Property NameValue
Transcript idBL67971_cuf0
Biotypeprotein_coding