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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL67318_cuf0 >transcript:BL67318_cuf0-protein ID=transcript:BL67318_cuf0-protein|Name=transcript:BL67318_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=463bp
MSVAELFSAASNGDCDRIHSLLEKGIDVDAKDNHKCTALHHAAKSGHCPA
MVLLLDRGADINATGSHGLTALHHSATAGHCAAIELLLDRGAYIDATGRY
GLTALHHAAMTCHCATITLLLDRGADVKNTNTDDRTALHFAAGSSRVVGN
WHSLYKMVGYPFMDRNLLAAQQHSADRRRCDAVALLLDGGADIDFQDNFS
CTPLHYAAYEGDTDTILLLLDRGAEFYKVNVLDQSLLHIAALHGNNDIVN
FCLDRGLKIDAVDMSCRTPLHIAAKYGHHETVRLLCYHSGYTAAKGTDNT
WAPLSDAAQNGHCNIIDLALTLGASLDERDCSGNTVLHSAIPGGGLDTVT
HILGLGVQVNARNEDGETALHKAVYWNNFRVVEALLMAGADCNVKNEKGD
MPEDKGSIEMHKYLLYHGNHYPNLQRLCRAKILGVLDKNRHDEIQHLPLP
QTLKDYLLFPHIY Run BLAST on NCBI mRNA from alignment at xpSc0039708:31090..33799+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL67318_cuf0 ID=transcript:BL67318_cuf0|Name=transcript:BL67318_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2710bp|location=Sequence derived from alignment at xpSc0039708:31090..33799+ (Branchiostoma lanceolatum)
GTGAAAGCGCCCTCTGGCGAAGTCTTACGGAACAGGGCCGACCGACGCTG
CATCCACCACCCACGTGTAAGTTGGGAGGAGAAAAAATTATTATACCCAC
ATTCTTGATCAACAGCGTAAGCCCAGAGGTATTCAACGTTTCTTTGATCT
ACTGCTATACTTAACTGTAAAGCAGAAATACTTTCCCATACGTCTTTTAA
TCGATGTTAGCTCGAATGAGTTGGGTGGGAATGGGGAGGGGGGCGACAAT
TTGGGAACTGTTTAATATATTCTACGGAAAGCCGTTAGATAGAATAAGCC
TCTATGAAGGAGACATCTAAGTATCATGCTATGGGCAATACATTCAACAT
TGACACGCTATTCAGTATATGTTCATCGAAGCCCAATGGCACACACATGC
ATTCGCAACAATCCTCAGCCTACGTATACTGTATTATGATAACGTTACTA
CCGTATTTTTTACTGATAATTTGTTTACCAAATTGTGTTCGACTGCCCAC
TGCACAGTTTAGATACAGGACATCACTGATGATCAGTTCAACGTTTCGAA
TGCCATCCATAAACGGATAATGACCTTTGACATCATGAAAACAAAATCAG
GAAGACCATAGATAGACATTAGATGTATCATTGTTTTGAACTATTATTTG
TTTATCCCAGTGCATAAGAGAAGTCTATCTTTTAGTACCAATTTTCATTC
TTTTATCTGTGTTAGGAATAAAACCGTAAGAGCCGAGGTGGATCGTCCCT
TTACAGAGGAACAATGAGTGTGGCAGAACTTTTCTCCGCTGCATCAAATG
GAGACTGTGACAGGATCCACTCCCTGCTAGAGAAAGGGATAGATGTTGAT
GCCAAAGATAACCATAAATGTACAGCACTACATCATGCTGCTAAGTCAGG
GCACTGTCCGGCAATGGTGCTGCTATTGGACCGAGGGGCTGACATCAATG
CAACTGGAAGCCATGGCCTAACAGCGCTTCACCATTCTGCTACGGCAGGG
CATTGTGCCGCTATCGAACTGTTGTTGGACCGAGGGGCTTACATCGACGC
AACTGGCAGGTATGGCCTAACAGCGCTTCACCATGCCGCAATGACCTGTC
ACTGTGCTACAATTACCCTTCTTCTGGACCGAGGTGCAGATGTGAAAAAC
ACGAACACTGATGACCGGACGGCCCTACATTTCGCTGCAGGTAGCTCTAG
AGTTGTGGGTAATTGGCACTCGCTGTACAAAATGGTTGGCTATCCCTTCA
TGGACAGAAATCTGTTGGCGGCCCAGCAGCATTCTGCAGACAGACGCCGC
TGCGATGCCGTTGCACTCTTGTTAGATGGAGGGGCAGATATTGATTTTCA
AGATAACTTCAGTTGCACTCCGCTACATTACGCTGCCTATGAAGGGGACA
CTGACACCATTCTCCTCTTGTTGGACAGAGGGGCAGAATTTTATAAAGTG
AATGTACTTGATCAGTCTCTACTACACATAGCAGCGCTTCATGGCAATAA
CGACATTGTTAATTTCTGTTTAGATCGTGGTTTAAAAATCGATGCAGTGG
ACATGTCGTGTCGCACACCACTTCACATAGCTGCAAAGTACGGTCACCAC
GAAACAGTCAGGTTACTGTGTTACCATAGTGGCTACACGGCTGCAAAGGG
TACGGATAACACATGGGCTCCTCTGTCAGATGCTGCTCAGAACGGACATT
GCAACATTATAGACCTTGCCTTAACATTAGGTGCTTCGTTGGATGAAAGA
GATTGTTCAGGCAACACAGTGCTTCACTCAGCCATCCCAGGTGGTGGTCT
GGACACCGTCACCCATATACTGGGTCTAGGGGTCCAGGTAAATGCAAGAA
ACGAAGATGGTGAAACAGCACTTCACAAGGCCGTCTATTGGAATAACTTC
CGAGTCGTAGAAGCATTACTTATGGCAGGTGCAGACTGTAATGTGAAGAA
TGAAAAGGGGGATATGCCTGAAGACAAGGGATCTATAGAAATGCACAAAT
ACCTGTTGTATCATGGAAATCATTACCCAAATCTTCAAAGATTGTGTCGA
GCAAAGATCCTTGGTGTTCTTGACAAGAATCGGCATGATGAGATCCAACA
TTTGCCTCTTCCACAGACTCTGAAGGACTACCTCTTATTCCCTCATATTT
ACTAGTGCTGAAAGGCTACCTACATAACATCAGAAACATTGCTAAAACAA
AGTGTGGATGTTAGCTTCACCAGTTGTTCTGTTGGAACTTCTGTAAATTC
TGTCAGACATGTATGTGTGGGCATACAGGAGAAATGCTCATCTGGTGGTG
AATTTGAAGGATTGCATGCAAACATTACTAGTACTAGTTTTTATGATATT
TAGATAAGTACTTTAAATTTTATAGCTTATTGACAATCACTTTATGTTTA
GTCTTATATAGAAATTAGTAATAAGTTAACTTTAACTGTGGTTACAACGA
TTTGGCATATAGTGGTATATAAGTTTACTAGGAAAATTTTATTTCTTAGT
TTTTTTTCTTAGAATCATAAAACAGATGGTTTGTTTTGTATAAGACAGTG
TAAGCAAATGTTATTCGAAACTTTAGGTTGTCCCTAGTTTTAATGACTGT
TCTAGTTGTAGTGCCCTTGTATATTTTAGGCTAGGAGTAAGTTTAGACAT
AGCTGCTTCTGTGGTAAAAATAGACCTGGTGGAAATATTTGTTTTTGTGT
GAAGAAAACT Coding sequence (CDS) from alignment at xpSc0039708:31090..33799+ >transcript:BL67318_cuf0 ID=transcript:BL67318_cuf0|Name=transcript:BL67318_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1392bp|location=Sequence derived from alignment at xpSc0039708:31090..33799+ (Branchiostoma lanceolatum)
ATGAGTGTGGCAGAACTTTTCTCCGCTGCATCAAATGGAGACTGTGACAG
GATCCACTCCCTGCTAGAGAAAGGGATAGATGTTGATGCCAAAGATAACC
ATAAATGTACAGCACTACATCATGCTGCTAAGTCAGGGCACTGTCCGGCA
ATGGTGCTGCTATTGGACCGAGGGGCTGACATCAATGCAACTGGAAGCCA
TGGCCTAACAGCGCTTCACCATTCTGCTACGGCAGGGCATTGTGCCGCTA
TCGAACTGTTGTTGGACCGAGGGGCTTACATCGACGCAACTGGCAGGTAT
GGCCTAACAGCGCTTCACCATGCCGCAATGACCTGTCACTGTGCTACAAT
TACCCTTCTTCTGGACCGAGGTGCAGATGTGAAAAACACGAACACTGATG
ACCGGACGGCCCTACATTTCGCTGCAGGTAGCTCTAGAGTTGTGGGTAAT
TGGCACTCGCTGTACAAAATGGTTGGCTATCCCTTCATGGACAGAAATCT
GTTGGCGGCCCAGCAGCATTCTGCAGACAGACGCCGCTGCGATGCCGTTG
CACTCTTGTTAGATGGAGGGGCAGATATTGATTTTCAAGATAACTTCAGT
TGCACTCCGCTACATTACGCTGCCTATGAAGGGGACACTGACACCATTCT
CCTCTTGTTGGACAGAGGGGCAGAATTTTATAAAGTGAATGTACTTGATC
AGTCTCTACTACACATAGCAGCGCTTCATGGCAATAACGACATTGTTAAT
TTCTGTTTAGATCGTGGTTTAAAAATCGATGCAGTGGACATGTCGTGTCG
CACACCACTTCACATAGCTGCAAAGTACGGTCACCACGAAACAGTCAGGT
TACTGTGTTACCATAGTGGCTACACGGCTGCAAAGGGTACGGATAACACA
TGGGCTCCTCTGTCAGATGCTGCTCAGAACGGACATTGCAACATTATAGA
CCTTGCCTTAACATTAGGTGCTTCGTTGGATGAAAGAGATTGTTCAGGCA
ACACAGTGCTTCACTCAGCCATCCCAGGTGGTGGTCTGGACACCGTCACC
CATATACTGGGTCTAGGGGTCCAGGTAAATGCAAGAAACGAAGATGGTGA
AACAGCACTTCACAAGGCCGTCTATTGGAATAACTTCCGAGTCGTAGAAG
CATTACTTATGGCAGGTGCAGACTGTAATGTGAAGAATGAAAAGGGGGAT
ATGCCTGAAGACAAGGGATCTATAGAAATGCACAAATACCTGTTGTATCA
TGGAAATCATTACCCAAATCTTCAAAGATTGTGTCGAGCAAAGATCCTTG
GTGTTCTTGACAAGAATCGGCATGATGAGATCCAACATTTGCCTCTTCCA
CAGACTCTGAAGGACTACCTCTTATTCCCTCATATTTACTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| xpSc0039708 | genome | xpSc0039708:31090..33799 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL67318_cuf0 |
| Biotype | protein_coding |
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