TCONS_00043306 (transcript) - C. hemisphaerica

Overview
NameTCONS_00043306
Unique NameTCONS_00043306
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length159

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00043306 ID=TCONS_00043306|Name=TCONS_00043306|organism=Clytia hemisphaerica|type=transcript|length=159bp
GCCGCACAAGGTGGGTTTTACGAGAACCTGGAATACCAAGACGCGCAAGA
AGGGGCTTACGAAAACGTTGAATACGCTCAAGGTCTATATGAGAACATTC
CATACCAAGGCGCGCAAAAAGAGGTTTTCGAGAACTTGGTATATCAAATT
ACGCAAGAA
Run BLAST on NCBI

transcript from alignment at sc0004112:2368..2745+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00043306 ID=TCONS_00043306|Name=TCONS_00043306|organism=Clytia hemisphaerica|type=transcript|length=378bp|location=Sequence derived from alignment at sc0004112:2368..2745+ (Clytia hemisphaerica)
GCCGCACAAGGTGGGTTTTACGAGAACCTGGAATACCAAGACGCGCAAGA
AGGGGCTTACGAAAACGTTGAATACGCTCAAGGTCTATATGAGAACATTC
CATACCAAGGCGCGCAAAAAGAGGTTTTCGAGAAGTTGGTATATCAAATT
ATGCAAGAAGGTGCCTGCGATAACGTGGCATATCAAGATGCAGAGGAACT
CTTTGATAATATTAACCAAGCCGCACAGGGTGGGTTTTACGGGAACCTGG
AATACCAAGACGCGCAAGAAGGGGCCTACGAAAACGTTGAATACGCTCAA
GTTCTATATGAGAACATTCCATACCAAGGCGCGCAAAAAGAGGTTTTCGA
GAACTTGGTATATCAAATTACGCAAGAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_027014XLOC_027014Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00043306-exon-sc0004112-1491911889:2368..2463TCONS_00043306-exon-sc0004112-1491911889:2368..2463Clytia hemisphaericaexon
TCONS_00043306-exon-sc0004112-1510915933:2368..2463TCONS_00043306-exon-sc0004112-1510915933:2368..2463Clytia hemisphaericaexon
TCONS_00043306-exon-sc0004112-1575043694:2368..2463TCONS_00043306-exon-sc0004112-1575043694:2368..2463Clytia hemisphaericaexon
TCONS_00043306-exon-sc0004112-1491911889:2683..2745TCONS_00043306-exon-sc0004112-1491911889:2683..2745Clytia hemisphaericaexon
TCONS_00043306-exon-sc0004112-1510915933:2683..2745TCONS_00043306-exon-sc0004112-1510915933:2683..2745Clytia hemisphaericaexon
TCONS_00043306-exon-sc0004112-1575043694:2683..2745TCONS_00043306-exon-sc0004112-1575043694:2683..2745Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0004112supercontigsc0004112:2368..2745 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00043306 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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