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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044119 ID=TCONS_00044119|Name=TCONS_00044119|organism=Clytia hemisphaerica|type=transcript|length=919bp
TTTGTAGGTTGCCTCGCTTATCAGTGTTATGTTTCTTCCACCGTGTTACA
TCGAGCGAGAAAGAAGTGTTTTGAGAGCTAAGAATCATTTATAAAAgtca
aaagttatattttgctgttttttatCCACATAAACATAGAAGTATTTGCT
GTcaagaatttagaaaatatatagTAAGTGcacttttctattttgcaatA
CTATTTCGATACAATGTTTAGTCTACACCATGAAAATTCTCCTTGCCAAT
GGCCTTGCTTTTTTAGTTTATTCAAGTCGTGAGTTGAATGCTCATTCACT
CAATGCACTGTTTACTCGAATATTTCCTTTTAAAATGTCTATGATTGTGA
ATCCTCGTTTGAATTTATTTCATAACAAAATCAAGAAGTTTGACTCCTTT
GCTCCTCTGTCACCACCACCCCTGTCTTTGATTATGCTTTAATTTGTGTC
TGTTGCCTTCTCTCTACTGGAAACTGATATCCAATTCGGTGGTACTGGTC
TTACCCTTCAAATGacaatttttagctttaaaaaagACAGATTGTGTCAA
AAGAATTTTGAGTTCCCTTTGCTTTTGGAAGACAAAAAGCTTGGTCTTTT
TATCATTTATGGACTGTCGTACGGTTGGACAGTTAGGGCACAGTTTCAGT
TTCCCCTCCATTTCAGCCTTCTGACTGGTTAGTGGGTGGTTAGAGGGGTA
GGGCTTCACAAGCCAAGTCTTCATAATGCCAAAATATCAACCCATTTTGA
ATACTCAAatattgacagatttttttaaattcagaaatccagaaatcttt
gttttttctttctatcTGATAGACATTGGTTAAAcaactttttcttcaaa
caccacTGAAACACCAACTTAAAAAAGGGCTAATACCAACACAATTTCAA
ACCTGTACGCATTCCGGGG Run BLAST on NCBI transcript from alignment at sc0004997:1585..2503 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044119 ID=TCONS_00044119|Name=TCONS_00044119|organism=Clytia hemisphaerica|type=transcript|length=919bp|location=Sequence derived from alignment at sc0004997:1585..2503 (Clytia hemisphaerica)
CCCCGGAATGCGTACAGGTTTGAAATTGTGTTGGTATTAGCCCTTTTTTA
AGTTGGTGTTTCAgtggtgtttgaagaaaaagttgTTTAACCAATGTCTA
TCAgatagaaagaaaaaacaaagatttctggatttctgaatttaaaaaaa
tctgtcaatatTTGAGTATTCAAAATGGGTTGATATTTTGGCATTATGAA
GACTTGGCTTGTGAAGCCCTACCCCTCTAACCACCCACTAACCAGTCAGA
AGGCTGAAATGGAGGGGAAACTGAAACTGTGCCCTAACTGTCCAACCGTA
CGACAGTCCATAAATGATAAAAAGACCAAGCTTTTTGTCTTCCAAAAGCA
AAGGGAACTCAAAATTCTTTTGACACAATCTGTcttttttaaagctaaaa
attgtCATTTGAAGGGTAAGACCAGTACCACCGAATTGGATATCAGTTTC
CAGTAGAGAGAAGGCAACAGACACAAATTAAAGCATAATCAAAGACAGGG
GTGGTGGTGACAGAGGAGCAAAGGAGTCAAACTTCTTGATTTTGTTATGA
AATAAATTCAAACGAGGATTCACAATCATAGACATTTTAAAAGGAAATAT
TCGAGTAAACAGTGCATTGAGTGAATGAGCATTCAACTCACGACTTGAAT
AAACTAAAAAAGCAAGGCCATTGGCAAGGAGAATTTTCATGGTGTAGACT
AAACATTGTATCGAAATAGTattgcaaaatagaaaagtgCACTTActata
tattttctaaattcttgACAGCAAATACTTCTATGTTTATGTGGataaaa
aacagcaaaatataacttttgacTTTTATAAATGATTCTTAGCTCTCAAA
ACACTTCTTTCTCGCTCGATGTAACACGGTGGAAGAAACATAACACTGAT
AAGCGAGGCAACCTACAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044119-exon-sc0004997-1491911889:1585..2503 | TCONS_00044119-exon-sc0004997-1491911889:1585..2503 | Clytia hemisphaerica | exon |
| TCONS_00044119-exon-sc0004997-1510915933:1585..2503 | TCONS_00044119-exon-sc0004997-1510915933:1585..2503 | Clytia hemisphaerica | exon |
| TCONS_00044119-exon-sc0004997-1575043694:1585..2503 | TCONS_00044119-exon-sc0004997-1575043694:1585..2503 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0004997 | supercontig | sc0004997:1585..2503 . |
Blast
The following BLAST results are available for this feature:
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