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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044306 ID=TCONS_00044306|Name=TCONS_00044306|organism=Clytia hemisphaerica|type=transcript|length=1920bp
CCTTCAAATTTACGCTTTTGAGCTACTGAATTTGATTGAGGCTTTTTTGT
CCTTCAGAGCACGCCATTGAGCTACTGACTCTGATTGAGGCACCCCGTGG
CCAGGGCAGCTTAAAGACTGTGCCTGCGACCGATTGAGCTTGCATTGTCA
GCTCCAAAAGCATTCATAACTGCATTGCCAGTTCAAATACACAAAGCTGC
ACTGTCAGCTCTAAATATAttcttgaaaatattatattataGTTGATTAG
ATACTTTTTAACAAAGCTGAGTAGTTTTGTTCTCTGAAAGATGATTTCAA
TTGCATTGTATCGTGCACGTATAGGAAGCTTTGCTTTTACAGCTCAGAGA
AATGTGAAATGTATCGCTAAATCTATTGTCGTTGGTTCTGACCTTTCAAA
TAACAGGCTTTTAAAACTATTGAGACCTGCTCGTTTCGTAGCACTTTTTA
CCCTCCTATGTTTTGCAATCCCAAAATCGTTTGAACCAACAGAGCTTTAC
ACGCCTCtagattttcttaatttttcaagaaatggAATTTTTGTCCAATA
TCCCAAAGCAGTGTATAATTTGGGAGATCCAAACCTTATTTTTCTAAAGG
TGAACTACACACTTCTTTTATCAGGCGATGTAGAACTTAACCCAGGTCCA
AGTGTTGTTCAAGGTTCTTTTCATCAGGGTCACCGTAAATTTGGTGAGAC
TGCGGGTATACAATGTtcgtcaaattgtttttttgctatttgctATGCTC
AGTTCAGAAAATTATCGCTATGGAAGACTCATGATTTGGATTATGTTTTA
GATCAAGGTGatatgaatttcaaaaaattgggtATCACAGGACAGTCCCC
GTACATTGAAGAGTTTTCTAAGGTAATTGAAATAGGAGACAGCACTTGTG
TactgaatttcaatatttttgaaggCTATTTTGAGACTGGTAATATTTCT
GTAAATTTTGTTCAAGAGGAACTATTGTTGCAACATTCTGGTGCAGTTTT
AGTGATAGCTGGAAATTGCTTAGCTGTAATGCATTACaacaaaaagtact
ttttttttgactcacATAGTAGAGACTCTGAAGGCCATCAAGTTGAAGGC
AGTATTGGAACttctgttcttttaaaatttgacaatTTGCAAGAAATTAA
ACAGTATGTAAGATCTGAGTATAAGAACACAAATCTTTTTAACATCATTT
ATCTCAAAACTGATTTCGATAATCaggaaaatataaaatatataatttca
GGGCAAGCCTTGCGTAGacggaaaaatatttcacaCAAGAGATCAGTTGA
GAAGATGAAAAGTACTGAACAATATAAAGATTTATTGCAAAAACAAAGCA
TTGCTAACAAAAGGTCACGTGAAAAGATCCAAGGCACTGATAAGCATGAG
caagaaaaagaattaaaacGTAAGCGTCGGGAATTAAATAGAGGCACAGA
AAACCATGagcaagaaaaagagaaaaagcgTAAGGCTAAAAAATCTGCTT
ATATTAAGAACAAAAAGCTCAAGTCGGGAAAAAGAGTTGATaatttcagg
caaaaaaaaattgagggtCCATCTTACATTTGTGTAACGTGCAATCGCAG
CATGTTCAAGAGATCtgtaataatttttgatgagcaaaagtattcaaaaa
tcaactttgaagaaatagaaaattttaatcctgTAACTACTTTCGACGGT
AATTTCTATGTATGCACAACTTGTCATCGAAAACTAATAAAAGGTGAAAT
CCCATGTCAATCTGTGTCTAACAAACTCCAAATTTTTGATCTCCCAGATC
ATCTAAGTGATAtaagaaaacttgaaagaaTTTTAGTGGCCCAAAGAATT
TTATTCTCAAAAGTCAGGATTATGCATAAAGGTGAATTCCCTAAATTACA
AGGTGCAATATGCAATGTTC Run BLAST on NCBI transcript from alignment at sc0005339:28..1947- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044306 ID=TCONS_00044306|Name=TCONS_00044306|organism=Clytia hemisphaerica|type=transcript|length=1920bp|location=Sequence derived from alignment at sc0005339:28..1947- (Clytia hemisphaerica)
CCTTCAAATTTACGCTTTTGAGCTACTGAATTTGATTGAGGCTTTTTTGT
CCTTCAGAGCACGCCATTGAGCTACTGACTCTGATTGAGGCACCCCGTGG
CCAGGGCAGCTTAAAGACTGTGCCTGCGACCGATTGAGCTTGCATTGTCA
GCTCCAAAAGCATTCATAACTGCATTGCCAGTTCAAATACACAAAGCTGC
ACTGTCAGCTCTAAATATATTCTTGAAAATATTATATTATAGTTGATTAG
ATACTTTTTAACAAAGCTGAGTAGTTTTGTTCTCTGAAAGATGATTTCAA
TTGCATTGTATCGTGCACGTATAGGAAGCTTTGCTTTTACAGCTCAGAGA
AATGTGAAATGTATCGCTAAATCTATTGTCGTTGGTTCTGACCTTTCAAA
TAACAGGCTTTTAAAACTATTGAGACCTGCTCGTTTCGTAGCACTTTTTA
CCCTCCTATGTTTTGCAATCCCAAAATCGTTTGAACCAACAGAGCTTTAC
ACGCCTCTAGATTTTCTTAATTTTTCAAGAAATGGAATTTTTGTCCAATA
TCCCAAAGCAGTGTATAATTTGGGAGATCCAAACCTTATTTTTCTAAAGG
TGAACTACACACTTCTTTTATCAGGCGATGTAGAACTTAACCCAGGTCCA
AGTGTTGTTCAAGGTTCTTTTCATCAGGGTCACCGTAAATTTGGTGAGAC
TGCGGGTATACAATGTTCGTCAAATTGTTTTTTTGCTATTTGCTATGCTC
AGTTCAGAAAATTATCGCTATGGAAGACTCATGATTTGGATTATGTTTTA
GATCAAGGTGATATGAATTTCAAAAAATTGGGTATCACAGGACAGTCCCC
GTACATTGAAGAGTTTTCTAAGGTAATTGAAATAGGAGACAGCACTTGTG
TACTGAATTTCAATATTTTTGAAGGCTATTTTGAGACTGGTAATATTTCT
GTAAATTTTGTTCAAGAGGAACTATTGTTGCAACATTCTGGTGCAGTTTT
AGTGATAGCTGGAAATTGCTTAGCTGTAATGCATTACAACAAAAAGTACT
TTTTTTTTGACTCACATAGTAGAGACTCTGAAGGCCATCAAGTTGAAGGC
AGTATTGGAACTTCTGTTCTTTTAAAATTTGACAATTTGCAAGAAATTAA
ACAGTATGTAAGATCTGAGTATAAGAACACAAATCTTTTTAACATCATTT
ATCTCAAAACTGATTTCGATAATCAGGAAAATATAAAATATATAATTTCA
GGGCAAGCCTTGCGTAGACGGAAAAATATTTCACACAAGAGATCAGTTGA
GAAGATGAAAAGTACTGAACAATATAAAGATTTATTGCAAAAACAAAGCA
TTGCTAACAAAAGGTCACGTGAAAAGATCCAAGGCACTGATAAGCATGAG
CAAGAAAAAGAATTAAAACGTAAGCGTCGGGAATTAAATAGAGGCACAGA
AAACCATGAGCAAGAAAAAGAGAAAAAGCGTAAGGCTAAAAAATCTGCTT
ATATTAAGAACAAAAAGCTCAAGTCGGGAAAAAGAGTTGATAATTTCAGG
CAAAAAAAAATTGAGGGTCCATCTTACATTTGTGTAACGTGCAATCGCAG
CATGTTCAAGAGATCTGTAATAATTTTTGATGAGCAAAAGTATTCAAAAA
TCAACTTTGAAGAAATAGAAAATTTTAATCCTGTAACTACTTTCGACGGT
AATTTCTATGTATGCACAACTTGTCATCGAAAACTAATAAAAGGTGAAAT
CCCATGTCAATCTGTGTCTAACAAACTCCAAATTTTTGATCTCCCAGATC
ATCTAAGTGATATAAGAAAACTTGAAAGAATTTTAGTGGCCCAAAGAATT
TTATTCTCAAAAGTCAGGATTATGCATAAAGGTGAATTCCCTAAATTACA
AGGTGCAATATGCAATGTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044306-exon-sc0005339-1575043694:28..1947 | TCONS_00044306-exon-sc0005339-1575043694:28..1947 | Clytia hemisphaerica | exon |
| TCONS_00044306-exon-sc0005339-1510915933:28..1947 | TCONS_00044306-exon-sc0005339-1510915933:28..1947 | Clytia hemisphaerica | exon |
| TCONS_00044306-exon-sc0005339-1491911889:28..1947 | TCONS_00044306-exon-sc0005339-1491911889:28..1947 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005339 | supercontig | sc0005339:28..1947 - |
Blast
The following BLAST results are available for this feature:
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