TCONS_00044631 (transcript) - C. hemisphaerica

Overview
NameTCONS_00044631
Unique NameTCONS_00044631
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length246

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00044631 ID=TCONS_00044631|Name=TCONS_00044631|organism=Clytia hemisphaerica|type=transcript|length=246bp
aaaacaaaaacacgtGGTTTTCGAAATTTTATTCTTCTTGTGGTGGAGCC
GGGGAGCTGGTGCGATAATTTACATATACTTGAGTTTTATAGAAAACAAT
GTCTCTATCATCACTACTGCCACTAGATCATGTAGAAGACCTTGTAGATG
GATGGCTGAGTGAAGACATTCCACATTTCGACTATGGAGGTTTTGTTGTT
GGAGAAAAGCAGTCTTCTGCAGTTATTTTATGTAAATCCAAAGGTA
Run BLAST on NCBI

transcript from alignment at sc0005908:2121..2366

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00044631 ID=TCONS_00044631|Name=TCONS_00044631|organism=Clytia hemisphaerica|type=transcript|length=246bp|location=Sequence derived from alignment at sc0005908:2121..2366 (Clytia hemisphaerica)
TACCTTTGGATTTACATAAAATAACTGCAGAAGACTGCTTTTCTCCAACA
ACAAAACCTCCATAGTCGAAATGTGGAATGTCTTCACTCAGCCATCCATC
TACAAGGTCTTCTACATGATCTAGTGGCAGTAGTGATGATAGAGACATTG
TTTTCTATAAAACTCAAGTATATGTAAATTATCGCACCAGCTCCCCGGCT
CCACCACAAGAAGAATAAAATTTCGAAAACCacgtgtttttgtttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_028248XLOC_028248Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00044631-exon-sc0005908-1491911889:2121..2366TCONS_00044631-exon-sc0005908-1491911889:2121..2366Clytia hemisphaericaexon
TCONS_00044631-exon-sc0005908-1510915933:2121..2366TCONS_00044631-exon-sc0005908-1510915933:2121..2366Clytia hemisphaericaexon
TCONS_00044631-exon-sc0005908-1575043694:2121..2366TCONS_00044631-exon-sc0005908-1575043694:2121..2366Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0005908supercontigsc0005908:2121..2366 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.88034	4.12135	3.48261	4.7719	0	1.42473	0	1.49529	3.1341	0	1.65531	0.544068	0	0.637396	0.654781	0	0	0.694982	0	0	2.36955	0	3.74318	0	0	0	0	0	0	1.34058
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00044631 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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