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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044644 ID=TCONS_00044644|Name=TCONS_00044644|organism=Clytia hemisphaerica|type=transcript|length=262bp
TTCTGCggtgaagtttttcaaatttccttatAGAAATCTCATGTTTGGCA
CTCCTACACGGTAGAAAAAGTGAAGAGATGAGAAATATGACGTAAACACG
ATGCAACTAGTAATTATATTCCCAagtgattacgaaaagttattCTTTCA
ACAATGATATTCCAAATGGACTTGCCGAATAATGGTACAGCTATCAAGTA
TCCCGGATCGAGAAGTCAACGCATCGCCATATTGCACATACAACATTAAT
TAGGAAAAGGGA Run BLAST on NCBI transcript from alignment at sc0005930:93..1638- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044644 ID=TCONS_00044644|Name=TCONS_00044644|organism=Clytia hemisphaerica|type=transcript|length=1546bp|location=Sequence derived from alignment at sc0005930:93..1638- (Clytia hemisphaerica)
TTCTGCGGTGAAGTTTTTCAAATTTCCTTATAGAAATCTCATGTTTGGCA
CTCCTACACGGTAGAAAAAGTGAAGAGATGAGAAATATGACGTAAACACG
ATGCAACTAGTAATTATATTCCCAAGTGATTACGAAAAGTTATTCTTTCA
ACAATGGTAAGTTTTTTACTACGTCTATTAGGATGACGTCTTTGCAGATT
CCTGTGAGAGTTACTTTAAGAAGGTCATTGACATGCGAATGAGTTCAAGG
ATATTATCTAAGGCCCTCTTTATATCACGATCAATAGGGGATAAAAGCTT
GCTTTTTTATGCTTTCTCACAAGCATTAATGTAAATTAAGGCAACGTAAA
AAGCTCGGTAAAATAATGGGAAGAAATATATTATCAGGTACGTATTATCC
CTGTATCACGCGAGTGGTATTTTAGCTCTCCCGCCTCTCGCACCTCCCTG
TGTCACAACAAAGGAAATATACCATATTACATCCCTGTCTCATGCGAGTG
TGCGAGTGATGTTTTGCTTTCCTATCTCCCTGTCTCACAATGAAGGAAAT
ACACATCATGTCCTTGTCGGAATACACATTACATCTGTCTTGTGCGAGTG
GGATTTTTTACTTTCTCGTCTTTTGTCTTAATGACGCGACTTAGAATACG
GCTATTATTACCCTAAGTCGATTAATTTTCGCATGTACTTTTTTTTAGAG
AATTAAGAATTTTAAAAAATTCGCTGCGAAGCAGCCTCGTTTTCACTAGA
TTTCACCAAATTTCTTTAGTTTTAACGGATTTTCAATTTATAGCAAGAAC
TAAGTTTTGCGAAAAGGGCCAAAACTCATGAAAATTACGAATTTCCCATT
TTCATCGCCCTCTAACGTTAGAGGTCGATGCCATTTTCAATTACTCCACG
CGAAGTTAGAGGTCGATGCCATTTTCAATTACTCCACGCGAAGTTAGAGG
TCGATGCCATTTTCAATTACTCCACGCGAAGTTAGAGGTCGATGCCATTT
TCAATTACTCCACGCGAAGTTTAATCCACCTAAAGCGGCAGATACGTAAG
GTACAGAATTTCACCGGTTTAGGGACTTTTAACGCCACATGATGGACATT
TAAAAATGTTAGAAAGGTTTTGAAACGCTGTTGTGTGTCAACTGTTTCAT
ATTTAATCGGTATTAAGATGATGTGGTTTTGCCAGTTGAAGATTAAAATA
ATTTGAATATATTGCTTTTCTTTCTAGATATTCCAAATGGACTTGCCGAA
TAATGGTACAGCTATCAAGTATCCCGGATCGAGAAGTCAACGCATCGCCA
TATTGCACATACAACATTAATTAGGAAAAGGTATTTCGTTCTCGAATGTT
TCACCTGGTTTTATAANNNNNNTTTATACCATTTTAATATGTATCTTTTC
TTCTAGTAAAATAATTTTGTCATACACCCCTATTTAAGGTCGTTGACTTC
TATCTAAAGATAAGCTCAATAATCTCATGAAGCCCTGAATATACCGCAAA
ATTAGTTTCATGACAATTTTTTTTAATTCATTGCCTTTTATAGGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044644-exon-sc0005930-1575043694:1483..1638 | TCONS_00044644-exon-sc0005930-1575043694:1483..1638 | Clytia hemisphaerica | exon |
| TCONS_00044644-exon-sc0005930-1575043694:309..411 | TCONS_00044644-exon-sc0005930-1575043694:309..411 | Clytia hemisphaerica | exon |
| TCONS_00044644-exon-sc0005930-1575043694:93..95 | TCONS_00044644-exon-sc0005930-1575043694:93..95 | Clytia hemisphaerica | exon |
| TCONS_00044644-exon-sc0005930-1510915933:1483..1638 | TCONS_00044644-exon-sc0005930-1510915933:1483..1638 | Clytia hemisphaerica | exon |
| TCONS_00044644-exon-sc0005930-1510915933:309..411 | TCONS_00044644-exon-sc0005930-1510915933:309..411 | Clytia hemisphaerica | exon |
| TCONS_00044644-exon-sc0005930-1510915933:93..95 | TCONS_00044644-exon-sc0005930-1510915933:93..95 | Clytia hemisphaerica | exon |
| TCONS_00044644-exon-sc0005930-1491911889:1483..1638 | TCONS_00044644-exon-sc0005930-1491911889:1483..1638 | Clytia hemisphaerica | exon |
| TCONS_00044644-exon-sc0005930-1491911889:309..411 | TCONS_00044644-exon-sc0005930-1491911889:309..411 | Clytia hemisphaerica | exon |
| TCONS_00044644-exon-sc0005930-1491911889:93..95 | TCONS_00044644-exon-sc0005930-1491911889:93..95 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0005930 | supercontig | sc0005930:93..1638 - |
Blast
The following BLAST results are available for this feature:
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