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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00044798 ID=TCONS_00044798|Name=TCONS_00044798|organism=Clytia hemisphaerica|type=transcript|length=655bp
CATAGGTCGAACGTGAACATGACAATGTCTACGGTTGGTCATTAGAGCAT
CAATACAGCACAAGTTCCCTTGCAAATGGTATGGCTGCTCTCAAAGGGAA
AGATCGACAAATTGCAAGATCTTTATCCGCTGCAAGTGAAGAAATGAACC
CCAATGAACAGaCGTCTTTCTATTTAATGAAATTGGAACGTCATCTGAAC
GAATCTGGTGATCACTGCGGTGGTGGTTATTATGGTCGCTATGATTACAG
CGATGGAGAATTCGAAGGTTGGTATACGAATATTGTCTTCACTTTTGGTT
GATGAATCTAAAGATCTATACGACAAGAAGCTTTTTCCGCTGTATTCGCC
AAGTAACATTTAGTAGCGCTAATGATTTATGAGGGGGCTGGCGAACTGAT
TATTTCAAGGATATTTCTTTTCGATGATGGTATCGCAATTACAAACGTCG
GAGTActcttttaaaaaagtgttttgagGCGATAAACGTAACGTCAAAAT
AGGTTCAAAGATTATATAAAACGGTTTGTCATCCAAAAACCTTAGAGCAA
CATCGTTACACCGAATAGTGCTTCTAAATACTTCCCGACCCCTTTATAGA
GAGAAATCGCAACGAGAACAGCAACATAAACCTAAGAGAGTGATTCTTAC
CATCA Run BLAST on NCBI transcript from alignment at sc0006234:31..898- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00044798 ID=TCONS_00044798|Name=TCONS_00044798|organism=Clytia hemisphaerica|type=transcript|length=868bp|location=Sequence derived from alignment at sc0006234:31..898- (Clytia hemisphaerica)
CATAGGTCGAACGTGAACATGACAATGTCTACGGTTGGTCATTAGAGCAT
CAATACAGCACAAGTTCCCTTGCAAATGGTATGGCTGCTCTCAAAGGGAA
AGATCGACAAATTGCAAGATCTTTATCCGCTGCAAGTGAAGAAATGAACC
CCAATGAACAGGTAAGTTGAGTGTTTTTACTCTGTTACAAAACTTTTGTA
TTTTATTGAAAATGTCCTCCTTTTTCGAGCATACTTGTCTGAAATAATCA
GTTCGAAAAAATATTTTTTTCCTTCGACAGCACAAAAAAAATTCTCAAGA
CATTTTTTTTTATTCGGCCCAAGGTCGGTTGCAATACTTTTGAAAAAGTG
CTGATGAATTTTTTTGTTTCATAGACGTCTTTCTATTTAATGAAATTGGA
ACGTCATCTGAACGAATCTGGTGATCACTGCGGTGGTGGTTATTATGGTC
GCTATGATTACAGCGATGGAGAATTCGAAGGTTGGTATACGAATATTGTC
TTCACTTTTGGTTGATGAATCTAAAGATCTATACGACAAGAAGCTTTTTC
CGCTGTATTCGCCAAGTAACATTTAGTAGCGCTAATGATTTATGAGGGGG
CTGGCGAACTGATTATTTCAAGGATATTTCTTTTCGATGATGGTATCGCA
ATTACAAACGTCGGAGTACTCTTTTAAAAAAGTGTTTTGAGGCGATAAAC
GTAACGTCAAAATAGGTTCAAAGATTATATAAAACGGTTTGTCATCCAAA
AACCTTAGAGCAACATCGTTACACCGAATAGTGCTTCTAAATACTTCCCG
ACCCCTTTATAGAGAGAAATCGCAACGAGAACAGCAACATAAACCTAAGA
GAGTGATTCTTACCATCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00044798-exon-sc0006234-1575043694:738..898 | TCONS_00044798-exon-sc0006234-1575043694:738..898 | Clytia hemisphaerica | exon |
| TCONS_00044798-exon-sc0006234-1575043694:31..524 | TCONS_00044798-exon-sc0006234-1575043694:31..524 | Clytia hemisphaerica | exon |
| TCONS_00044798-exon-sc0006234-1510915933:738..898 | TCONS_00044798-exon-sc0006234-1510915933:738..898 | Clytia hemisphaerica | exon |
| TCONS_00044798-exon-sc0006234-1510915933:31..524 | TCONS_00044798-exon-sc0006234-1510915933:31..524 | Clytia hemisphaerica | exon |
| TCONS_00044798-exon-sc0006234-1491911889:738..898 | TCONS_00044798-exon-sc0006234-1491911889:738..898 | Clytia hemisphaerica | exon |
| TCONS_00044798-exon-sc0006234-1491911889:31..524 | TCONS_00044798-exon-sc0006234-1491911889:31..524 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0006234 | supercontig | sc0006234:31..898 - |
Blast
The following BLAST results are available for this feature:
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