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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054687 ID=TCONS_00054687|Name=TCONS_00054687|organism=Clytia hemisphaerica|type=transcript|length=1206bp
ttatatTTGATGAGTTGCGATTTGCGAGTTGCGATgaattgcgattaaat
taaattggatcactccgttAGAACTTTTTAGCATGGGTGGCTGAGCGCTT
CAGTAACGTacaaaagcgaataaaatctaatacaattgaatcaatcaaac
gtaatcaaacataattgaacaagaatcgaagcaatcgaacggcaaatcct
gggtaatattcaattgcgattcgattgcgcttaaaaatcgaattttaatt
attcgattgtgttcaattcgTTCAATTGACACTGTCTGGATATTATCAGC
TGTAACAACCAGACGTTACTAATCGATAAAATCGATTATCGATGAAAATC
AATAGCGCATCGATAATTAATCGATAGATTaaatattgattaaaaacaat
aatcgatagctaatcgatacTCTCAATTTTTTAGCACTCAATTAAATTAT
CACCAtagatttttaatcgataatatcGATTACAGTGTTAATAATTGATA
ATATTGATTAATATCGATATAAACGATACCTCAACCCTATCGATTTTTAA
TCTAATTGATATAATCAATAtcgatactcacaattttttaggcgccgatt
atttatcgattatcgTTTTTAGTCTATATTTAATCAATCAATTAATTAAA
TCGATTAACTATCGATTTTAATGGATAATCAATTTTATCGATTATTAACG
TCTGGTAACAATTATCACATTTTTATATAACACCCATTTTACTGTATTGC
ACAGGTTGTAAACAACTTAAATTGTCTTTCCTTTGAAAGCCCTGATACTA
TTTTCGATCGGGCGAAACAAACCAGAGTTCACGTCTTATCGCTTGATTGA
ACGAAGTTCTAAAAAAGAGTCAGACATCAGAAGAAAAAATGGTGTGGTTT
tgtagtttttgttttgtttgttttgttttgtttagcAAGAATATTGTTAG
CCTGGAAACTGGACAACGAAAACTTGTTTGCtgaattaaatttttctgac
ttttaTAATGGCAATGGCCTCATTCAGGTCAGAAACAGATTTTGGGTGCC
AGGAGAGACTtacatagctgtcaactctcccgcattgGGTGGGAGACTCA
CACATGCCAACATTTTCCCCCCGCgggaaaaaaattcagccaaatctccc
gtattttcaggattttctcctgcatctcccgcatttccaTAAATTTTCCG
AATtcc Run BLAST on NCBI transcript from alignment at scaffold_243:393752..394957 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054687 ID=TCONS_00054687|Name=TCONS_00054687|organism=Clytia hemisphaerica|type=transcript|length=1206bp|location=Sequence derived from alignment at scaffold_243:393752..394957 (Clytia hemisphaerica)
ggaATTCGGAAAATTTAtggaaatgcgggagatgcaggagaaaatcctga
aaatacgggagatttggctgaatttttttcccGCGGGGGGAAAATGTTGG
CATGTGTGAGTCTCCCACCcaatgcgggagagttgacagctatgtaAGTC
TCTCCTGGCACCCAAAATCTGTTTCTGACCTGAATGAGGCCATTGCCATT
AtaaaagtcagaaaaatttaattcaGCAAACAAGTTTTCGTTGTCCAGTT
TCCAGGCTAACAATATTCTTgctaaacaaaacaaaacaaacaaaacaaaa
actacaAAACCACACCATTTTTTCTTCTGATGTCTGACTCTTTTTTAGAA
CTTCGTTCAATCAAGCGATAAGACGTGAACTCTGGTTTGTTTCGCCCGAT
CGAAAATAGTATCAGGGCTTTCAAAGGAAAGACAATTTAAGTTGTTTACA
ACCTGTGCAATACAGTAAAATGGGTGTTATATAAAAATGTGATAATTGTT
ACCAGACGTTAATAATCGATAAAATTGATTATCCATTAAAATCGATAGTT
AATCGATTTAATTAATTGATTGATTAAATATAGACTAAAAAcgataatcg
ataaataatcggcgcctaaaaaattgtgagtatcgaTATTGATTATATCA
ATTAGATTAAAAATCGATAGGGTTGAGGTATCGTTTATATCGATATTAAT
CAATATTATCAATTATTAACACTGTAATCgatattatcgattaaaaatct
aTGGTGATAATTTAATTGAGTGCTAAAAAATTGAGAgtatcgattagcta
tcgattattgtttttaatcaatatttAATCTATCGATTAATTATCGATGC
GCTATTGATTTTCATCGATAATCGATTTTATCGATTAGTAACGTCTGGTT
GTTACAGCTGATAATATCCAGACAGTGTCAATTGAAcgaattgaacacaa
tcgaataattaaaattcgatttttaagcgcaatcgaatcgcaattgaata
ttacccaggatttgccgttcgattgcttcgattcttgttcaattatgttt
gattacgtttgattgattcaattgtattagattttattcgcttttgtACG
TTACTGAAGCGCTCAGCCACCCATGCTAAAAAGTTCTaacggagtgatcc
aatttaatttaatcgcaattcATCGCAACTCGCAAATCGCAACTCATCAA
atataa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054687-exon-scaffold_243-1491911889:393752..394957 | TCONS_00054687-exon-scaffold_243-1491911889:393752..394957 | Clytia hemisphaerica | exon |
| TCONS_00054687-exon-scaffold_243-1510915933:393752..394957 | TCONS_00054687-exon-scaffold_243-1510915933:393752..394957 | Clytia hemisphaerica | exon |
| TCONS_00054687-exon-scaffold_243-1575043694:393752..394957 | TCONS_00054687-exon-scaffold_243-1575043694:393752..394957 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_243 | supercontig | scaffold_243:393752..394957 . |
Blast
The following BLAST results are available for this feature:
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