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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00069147 ID=TCONS_00069147|Name=TCONS_00069147|organism=Clytia hemisphaerica|type=transcript|length=1208bp
GCTGAATTATAGAAGAGGAAATTTAGTGGAAAGATTATGATTATGATTAT
ACTTTTACAATCACTGGCATGTGATAACTCACCAGGATTGTAAACACGCT
GTTGGCCCACAACTTTTGATGGTTTTCctgtttttcctaaaaaattaaaa
gaaatatttcatttatttcataATGAATTAAGAAATTCAGatcataattt
tgaaaaattgttgagGCATTTGGTACCTCTAAGATGTCAAGGTTTAAAAT
AAGTTTCATGGACTTATTACATTTAAGTGATAGGGTACAATATTTAAGCA
GAAAACTAGAAGAGTGAATTtcagaaacaaaaacataaaaatcaactcAG
TCTTACTTCGTTTTGGGAAATTCACCATCTCTTCGTCTGAGCTTTCATCC
AGAGTTGGTGACTTTCTCAGATCATCATTGTCTTCCAAGTCATGAGCATG
ACAATCCTCAATGTCTGAGTCGTATTGGCTGTTACGTGTTCGATCTATTG
AgcaataatgataaaaaaatgcAGATTTAAGGCATTCAGCCTGCTTCAAA
GTTATAAATGACAGATAGAAGGACAAACATTAGGAAAGTCTGGCTGGATT
GATATGAATAAGACGATTTTGACTGAATCGGAAAAACAAGTagcttacct
taagggaagaaattaaCGTGAGAATTAATTAATgtagaataaattaatgc
gagcAACCCCCCAAACATTTATGTTATgaagaataaattaatgcgaacAG
GCCCATTGTAATTGATTAATTAATGCAAAAGAACCTTTCAAATCATTTTG
TCCCTTTCAAGAAATAGAACGAACTAAAAAAATTCCAACGAAATACAAAC
AAAAcgtgtaaaaatgtttttttcgtCTTCATTCTTGTCATTGAGAAACT
CAAAGATGTTTCTGACTTCTTCCCCACCAAACTCCCAATCATCCTCTGAA
Ttagcaatattttagaaaaaaatgcggaatttaattttgtgaaaaaaggc
CAAATTTGCATTAATTAATTCTGCATTGATTAATTCTCGaattaatttat
tcccttaaggtagataTATATTCAGATGTATTACCACCAATCGACGATTT
CCGTTGTCTCGCCTTATTTGACTTTCAAGCTTATCTGATTCCCTTCTGCA
AGCTTCAAATGTAcctgaaaaaggaaaatatattGATAACAAGAGTTCAG
AGATTTTT Run BLAST on NCBI transcript from alignment at scaffold_494:53948..55155 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00069147 ID=TCONS_00069147|Name=TCONS_00069147|organism=Clytia hemisphaerica|type=transcript|length=1208bp|location=Sequence derived from alignment at scaffold_494:53948..55155 (Clytia hemisphaerica)
AAAAATCTCTGAACTCTTGTTATCaatatattttcctttttcaggTACAT
TTGAAGCTTGCAGAAGGGAATCAGATAAGCTTGAAAGTCAAATAAGGCGA
GACAACGGAAATCGTCGATTGGTGGTAATACATCTGAATATAtatctacc
ttaagggaataaattaattCGAGAATTAATCAATGCAGAATTAATTAATG
CAAATTTGgccttttttcacaaaattaaattccgcatttttttctaaaat
attgctaATTCAGAGGATGATTGGGAGTTTGGTGGGGAAGAAGTCAGAAA
CATCTTTGAGTTTCTCAATGACAAGAATGAAGacgaaaaaaacattttta
cacgTTTTGTTTGTATTTCGTTGGAATTTTTTTAGTTCGTTCTATTTCTT
GAAAGGGACAAAATGATTTGAAAGGTTCTTTTGCATTAATTAATCAATTA
CAATGGGCCTgttcgcattaatttattcttcATAACATAAATGTTTGGGG
GGTTgctcgcattaatttattctacATTAATTAATTCTCACGttaatttc
ttcccttaaggtaagctACTTGTTTTTCCGATTCAGTCAAAATCGTCTTA
TTCATATCAATCCAGCCAGACTTTCCTAATGTTTGTCCTTCTATCTGTCA
TTTATAACTTTGAAGCAGGCTGAATGCCTTAAATCTgcatttttttatca
ttattgcTCAATAGATCGAACACGTAACAGCCAATACGACTCAGACATTG
AGGATTGTCATGCTCATGACTTGGAAGACAATGATGATCTGAGAAAGTCA
CCAACTCTGGATGAAAGCTCAGACGAAGAGATGGTGAATTTCCCAAAACG
AAGTAAGACTgagttgatttttatgtttttgtttctgaAATTCACTCTTC
TAGTTTTCTGCTTAAATATTGTACCCTATCACTTAAATGTAATAAGTCCA
TGAAACTTATTTTAAACCTTGACATCTTAGAGGTACCAAATGCctcaaca
atttttcaaaattatgatCTGAATTTCTTAATTCATtatgaaataaatga
aatatttcttttaattttttaggaaaaacagGAAAACCATCAAAAGTTGT
GGGCCAACAGCGTGTTTACAATCCTGGTGAGTTATCACATGCCAGTGATT
GTAAAAGTATAATCATAATCATAATCTTTCCACTAAATTTCCTCTTCTAT
AATTCAGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00069147-exon-scaffold_494-1491911889:53948..55155 | TCONS_00069147-exon-scaffold_494-1491911889:53948..55155 | Clytia hemisphaerica | exon |
| TCONS_00069147-exon-scaffold_494-1510915933:53948..55155 | TCONS_00069147-exon-scaffold_494-1510915933:53948..55155 | Clytia hemisphaerica | exon |
| TCONS_00069147-exon-scaffold_494-1575043694:53948..55155 | TCONS_00069147-exon-scaffold_494-1575043694:53948..55155 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_494 | supercontig | scaffold_494:53948..55155 . |
Blast
The following BLAST results are available for this feature:
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