TCONS_00067995 (transcript) - C. hemisphaerica

Overview
NameTCONS_00067995
Unique NameTCONS_00067995
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length816

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00067995 ID=TCONS_00067995|Name=TCONS_00067995|organism=Clytia hemisphaerica|type=transcript|length=816bp
tttttttagtGTTgtttaaagaaatgaaaaaataataaatatttaaCAAT
ACTAAACAAAGTTACATtatcaagaaaagaaaacagTTGTAAAACTTCAC
ATGCATGGCGAAACAGATCTTCAAATCTTTCACTCGAAAATGTATATTGA
CGAATGTAAAGGGAAGAATTATTTTTTGACTTAAAgatctttttttgcat
tttttgatcAAATTCAAGTTGGTGTTGTGCCCATCAAACAACTTTTGTCC
AGTTGTTCAGAACTTAAAAGTATATTATAACAATACCATTTCTGGTCTAC
AAAATCCTTATTCTTCGTTATGATGGTCAGTCCAGTTCGTAAAGTTTCGA
CTGCGTTATTTTATGCAACATCATCATTATTGATCGTGTTTGTTAATAAA
ATGGTATTGACAACGCACAAATTCCCTTCTTATCAAGCTCTTGGAATCGG
CCAGATGATAGCATCATTACTGGTGTTGGGAACAGCAAGGGCAAGTGGTA
TCATCACATTCCCTTCATTCCAGCGAGACACTTTAAGAAAGATTTTCCCG
TTACCACTGATATTCTTCCTGAACTTGGTATGTGGGCTTGGAAGTACAAA
AACTTTGAAtctACCAATGTTTACAGTTTTGAGAAGATTTTCGATCCTTT
TCACCATGTTGGCTGAATATGTATTACTGAGGAAATCTGCAAGTTGTCGA
GTGCAGTCATCCGTCTATACAATGATCTTTGGTGCTCTGGTAGCTGCAag
TTCGGATTTGGTATTCGATTGGTATGGTTACGCATTGATTATGGGAAATA
ATGTTATGACCGCTGC
Run BLAST on NCBI

protein sequence of TCONS_00067995-protein

>TCONS_00067995-protein ID=TCONS_00067995-protein|Name=TCONS_00067995-protein|organism=Clytia hemisphaerica|type=polypeptide|length=165bp
MMVSPVRKVSTALFYATSSLLIVFVNKMVLTTHKFPSYQALGIGQMIASL
LVLGTARASGIITFPSFQRDTLRKIFPLPLIFFLNLVCGLGSTKTLNLPM
FTVLRRFSILFTMLAEYVLLRKSASCRVQSSVYTMIFGALVAASSDLVFD
WYGYALIMGNNVMTA
Run BLAST on NCBI

transcript from alignment at scaffold_478:255956..271874+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00067995 ID=TCONS_00067995|Name=TCONS_00067995|organism=Clytia hemisphaerica|type=transcript|length=15919bp|location=Sequence derived from alignment at scaffold_478:255956..271874+ (Clytia hemisphaerica)
tttttttagtGTTgtttaaagaaatgaaaaaataataaatatttaaCAAT
ACTAAACAAAGTTACATtatcaagaaaagaaaacagTTGTAAAACTTCAC
ATGCATGGCGAAACAGATCTTCAAATCTTTCACTCGAAAATGTATATTGA
CGAATGTAAAGGGAAGAATTATTTTTTGACTTAAAgatctttttttgcat
tttttgatcAAATTCAAGTTGGTGTTGTGCCCATCAAACAACTTTTGTCC
AGTTGTTCAGAACTTAAAAGTATATTATGTAAGTATGACCACCTTAACCC
TTCAAATCCGAGTGACGTGTATACGTGTATATTCTTAAtcttaaaaagca
aattgagtctctgtaagggacaaaaattcacgaaaattgaaatttcctgT
AGGATAAAGGGCCACTAAACAGAAAATGAAACAAGAACTGGAGGTTATTT
GATTGGatcccagttggcacacaacgtttattcgacgtttatctaacgtt
cacaacgtccatttaacgttagatgaacgttgaaacattGTTAACcagtt
actttttcgaagcgggctactcggctttttgcgcaatgtaattggttctt
ttcgcatgacgacgggcctacattgtccagagttgcccgtcgttaggaaa
cttcattgtgacgtcactttttcaaaggaaaatgaacaatgcgttgacat
tatttcttacattttttatttctaacgtgagaaattataacaatatctct
tttcgcttgttttttccctttatttcgctatttttcctggataaagcgct
aaaaatcaatcgaagctgaaggaaacgattgacaaatacaataatgaccg
gttttttcgggccctcactaaccggtcattattgtattaatgttgtgtgc
cagctgggtaattCGATTTCGGAGGGGTTCAGTGACATATAGGCTATATT
ATTCCTAGTCTTAATAAAACAAGTCTCATGTTACTCTTCGTATCAAAAGC
AGCTTAAAAAGTCATTtgtgatgtttaaaattttgcagggaaTTCTACTT
TTTATCAAATCGATTGATGATTTGATGGTTACTCAGAGATTGAGTATGAA
TCCAAACTTCACTTAAATAATtcctttcattatattttttctgtttttct
agAACAATACCATTTCTGGTCTACAAAATCCTTATTCTTCGTTATGATGG
TCAGTCCAGTTCGTAAAGTTTCGACTGCGTTATTTTATGCAACATCATCA
TTATTGATCGTGTTTGTTAATAAAATGGTATTGACAACGCACAAGTAAgt
tttttcgttcgttcgttcgttcggaAAATATNccccccccccctgggtcg
GGAAGGGTTTCCATTAATACTATAGATTATTCAGTTCACAAGTGCAACTT
GTAGCATAGAGGTTACTTAGGTTTTTATATAGTAGTCTCTAACAGGGGGA
GTTCCAGAAATACTATAGAATCAGTTTACTCACAAGAGTAACATGTTATT
TTATAGTAGCCTAACAAAAGAAGATTTGAACTTGAAATTTAATCTCAATA
CATATACTTCACATGATTACAAAAATTCATTAATAAactgtttatctttt
ttttagtGTTgtttaaagaaatgaaaaaataataaatatttaaCAATACT
AAACAAAGTTACATtatcaagaaaagaaaacagTTGTAAAACTTCACATG
CATGGCGAAACAGATCTTCTTCAAACATTCCACTCGAAAATGTATATTGA
CGAATGTAAAggaaagaattattttttgacttaaagatctttttttcatt
ttttgatcaAATTCAAGTTGGTGTTGTGCCCATTAAACAAATTTTGTCCA
GTTGTTCAGAACTTGAAAGTATATTGTGTAAGTATGACCACCTTAACCCT
TCAAATCCGAGCGACGTGTGGTgtatattcttaattttaaaAGGCAAATC
GAGTCTCTGTAAGGGacaaaaattcacgaaaattgaaatttcctgTAGGA
TAAAGGGCCACTAAACAGAAAATGAAACAAGAACTGGGAGGTTATTTAAT
TGGatcccagttggcacacaacgttttttcgacgtttatctaacgttcac
aacgtccatttaacgttagatgaacgttgaaacattgttaaccggttact
ttttcgaagtgGGCTAcgcggctttttgcgcaatgtaattggttcttttc
gcatgacgacgggcctacactggccagggttgcccgtcgttaggaaaatt
cattgtgacgtcactttttcaaaggaaaatgaacaatgcgttgacatcat
tttcTCTCATATTGTAttaatgttgtgtgccagctgggtaattCGATTTC
GGAGGGGTTCAGTGACATATAGGCTATATTATTCCTAGTCTTAATGAAAC
AAGTCTCATGTTACTCTTCGTATCAAAAGCAGCTTAAAAAGTCATTtgtg
atgtttaaaattttcNtcgttcgttcgttcgttcgttcgttcgttcgttc
gttcgttcgttcgttcgttcgttcgttcgttcgttcgtttgttcgttcgt
tcgttcgtatTTCGTTTTCCGATGACCTCATTTAGGGTTTGGATGACGTC
ACAATgtattaaatttttcaatttttcgttgtaATTTTTCGTTGTAATTT
TTCGTACTTTTAGGGTAGAATCATTGATTCCCTAGAACCCTTCCCACCAT
TTAAATTACTGATGATGCGCTCATCTTATCCCGTTTCGGCGGGTTCAACG
CTGGGTGACGGCTAGTATTTAAACTAAGTTAACAAATATTCAGGTAGCAA
ATAAGTTtgcagggatttttctaagcactttgagcTGGGGACGTTTTTGT
AAAGTTAGATTGAGTTTCTAATAtgccttatcggggaaaacttcgtcggg
gaaaaatattcgtcacttgctggtagttggtaaacgcattaaggccgggg
aaaattttcgtcggagaaaaatattcgtcacttgctggtagttggtaaac
gcattaaggccggggaaaattttcgtcacttgctggtagttggtaaacgc
attaaggccggggaaaatttttgtcggagaaaaatattcgtcacttgctg
gtagttggtaaacgcattaaggccggggaaaattttcgtcggagaaaaat
attcgtcacttgctggtagttggtaaacgcagtaaggccggggaaaattt
tcggcggagaaaaatattcgtcgcttgctggtagttggtaaacgcagtaa
ggccggggaaaattttcggcggagaaaaatattcgtcgcttgctggtagt
tggtaaacgcagtaaggccggggaaaattttcggcggagaaaaatattcg
tcgcttgctggtagttggtaaacgcagtaaggccggggaaaattttcgtc
ggggaaaaatattcgtcacttggccaaaatttcgtcacttttccccgacg
aagttttccccgataaggtttGCCTGAAAGGGAATTTTCTCAGCAAAACT
GTATATTGATGAAGCTGAGGTTGGTGTTCAGAGGGTGAAGCtccacaaaa
atatttttaatatgtAGATAATATCagagatttttgtttttatcattaac
atgaaaaatatgagcaatcttattggctaaaaacgcctacataaatgctg
tatttcatattgtaccgtacaaatacaagaccgcgttcaaaaaagaggtc
tggtaagcgagagatcATATTCTGTACAATTTTATCATTAGAAAGGTTTT
CTCTTCGCTTCCAATAACattcgcctaaaggctcggaaaatatgacgaaa
aatttgaactcgaaaaatatatcccatattcatgatatgcaccactgcaa
tgtcttctgacattacgtcacagAACCAATggctcattggttggaagtga
cgtaaaatcagtcaatacgatACAATCAGCTATTgagtggaacggaagac
attgcaatggtgcatatcatgaattgtactCGGTACTGTGTGATAACTAT
TACGTAAACAACACAAGTTTAATATTGctagaaaatatattttatacttt
ggattgagtttcaaaaactcaattttagaTTGATTATTTTGGCCGGTAAA
CGGACATACAAAAGTGCTAAGAAAAATCCCTGAGTTTGTTTCAAAGTAAT
GATTTTGTACTTAAACATCTGTAAGAGAATTAAGGGGTACGGGGTAACTT
CTCTTTATAAAAGAGGATATTTTAGGAGTGAAAGTTGGGATAGCCAAGAG
CTACCTGTCCTAAAATAAAtaacgagtttatgtatttgcacttttgggga
cggtaaagtgactgaagcgatttggaataacccgcacgCAGTTCTGTTCC
GCAAAATCATGTACGGTAAAATtgttgatttaccgtcgtcctcagttggt
caggatCAAGTCAAATTataaccttaccgtctccgtcgcaggcAAACACG
TATACATAAAGTCGGTAATatctttaacatttttttttcttccaccTATA
GCTATACTGCAGATAGGTATGTGAAGTGGCTTTCTTTATGGTTacattgg
aaaatttttgcatGCTCTCTTTCTTCTTCTAGATTCCCTTCTTATCAAGC
TCTTGGAATCGGCCAGGTATATATTACGGATGatatggagtttttataag
atactttaataattgatcatttgaagtaataaaaatgacgcgttctttag
aaaaagtaagaaaattgttttattactggttaaacgaccaaccaaatcaa
ataagagcttgtaaaaactccatctcgtacCATATATTATATGTTTcgaa
tattttgtttttgtgatacACATTATTATGAAGTCGATCAAGCGCACCAT
TTAGGCTAGGTCGCGATATATGTGTGTCTGAAAATGTCCCGTTATGTTTT
ACTGACTGTAGTATGATAGTATGAAATTTTCGTATTGAGATAGAGATTGC
CGGTTTCATACATGCGATTTTCACTTGCCGTACGTCAGTTTATTCCATTA
GACGTGAAAAGCAACGACATTTTCAGACATatattaagcagttattggac
aaagtcgaatccaatatgcaaaaatattgggcgtgcgagaaaagatattg
gacgaggcTTCGCCGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNcaatttttgaaatatgtagcccccatggaagctatatattcgaaaata
ttggacagcaaagaagccaatcaaatgtcgctatttacgcgcgtcggata
ataaatATATATATCGCGACCTAGCCATCAGTTACCATTCACTGTGCTTT
TAGTAAGCAATGACCAATAAGAGTGCTCGAACTTAATGATTACAAAGTTt
tatactacacgttttttaataagaacatccaaaaattttgaagtcttcgg
attttcttaactttttaagcccaaaaatgttctcagtatgttcttatttt
gaccattttgtgaatatttttgaccattttcctaagaaatagggtgtttt
tgagttcacaaagccttaaaatgttcttaacttgtccttatgttcttata
tagtttgttctcatagaAAAAGCGTAGTAGTACTACTTGTAGCAGTTTAA
GCGAAGAAAACGAATTAACCTTTTGTTTTTCGAACCATTTCAGATGATAG
CATCATTACTGGTGTTGGGAACAGCAAGGGCAAGTGGTATCATCACATTC
CCTTCATTCCAGCGAGACACTTTAAGAAAGGTAATCATAAACATGGAGCG
ATGGTCAAGttgtcaaaggcgtcagcgtctcaaaccagggattcgctgtt
cgaatccccgctccttccaatgttccgttcaatTCATAgttagccgagcc
ggctggccgtggtccccgtgaaaacaatcgaaagactgtctaaaagtcct
agattactgggctatccacgtaaaatactactttgacccctaaattgctt
gaattaGAGTAATTTCAAGATCAGCATtgctcttaaattgttcttatttt
tttgactcTTTGACCCCTAATTTGCTTGAATTAGAGTAATTTtgggctca
gcattgttcttaaattgttcctatttttttggcgattttgagcctcattg
ttctcataaaattgtttttataaaaaaaatgtattacttTGGATAAGGCG
TTTATGGAATCCTAAAAGAATACAATATTATCAACATTTATTTAAACATT
CCTTCATTGGAATTCCTTACGACTTCTTGTTTAAAAGGAACGCTTCTCCT
AGAGgggaggcgtttattcgaagtcaCGAAGAGGGCGATAATTTGAATAT
GTTTTCTTTTAAGTGGGGCGTTTGTTCAGgtggttcttttgttttttgga
aGATCATTAAACTTTAACACTCTAGCCTTAAACTGCTGTTTTTATTCTCA
CAGATTTTCCCGTTACCACTGATATTCTTCCTGAACTTGGTATGTGGGCT
TGGAAGTACAAAAACTTTGAAGTATGTAACCTATCAGCAGCTATaaatta
atagccgtagtctgtatgtcactTTGTGTGTTTGTCTGTCTGTCCATGTG
TTACtatcgttttcgcaagcaatgttttgttcttttaaaagatgactttt
gttttgattgacagattataATTTGTGCCTTGACTTGCCCGCctatatgt
ttttcttttttttctctcttttcttttgttttatgttttcgaatatAATT
GACGACCTTATTTGATGATTAAAACTACATTCGAatccttttcaaaacaa
agcaaaatctttttatagaaaagaacaaatctgaaacaaaataaaaaaaa
atcaaagagttATGACCGGGTATTATTTTGCATGTCTCACTGTACACTTT
TGTGGTCGGGTAGttcccacagatatctgtaaagcccgaagggctagatt
tgcggcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNatcgcgctccgaaaacaattcaaatgctagatcctatccat
cggcacgaaatttaaaaagtcaaatttttgcttcacttttttttgctgga
gaaagcttaaggttgcaaatctagcccttcgggcttagatatctgtggta
gTTCCTCCGCTTTGCAGCAATTCTGGTAAATCCTGTAAAAGGACTTTAAA
AAACGTTCGCTGGTAAATCATTAATATTATCTTTGTGTCCTAAAGGGTCA
CTAAACGTCCGAGTTTTTGAGTCACGTTGTgtttcacgtttttttttatt
tcagtctACCAATGTTTACAGTTTTGAGAAGATTTTCGATCCTTTTCACC
ATGTTGGCTGAATATGTATTACTGAGGTATATACTGAGGTTTTTTCACTT
AGGTAAATGCGtggaaatttaaagaaaattgcgtgaatgctagcctatac
tagaagtcacccgcgttttttgtacgcagtaacgtctattccactttgcg
actttttcgaatgttttgagctcaggttttcgggctccaaacattcgatt
tttttacgtcacttttaatTTTCGAAGCTACTGCAGTagagaaaaaatct
aatttgcgtcaaagcacttgaaaggcttctatttttcaaaaatcttcaaa
gtggaactcaccaagaaatgcaatgaaaaaatcccggtttttcgTGACGT
GCTCGctacgtgaatgcgtgaatcggaaagctttgcgtgaacaaaaattg
caaaaaaacattgcgtgaatgcgtagATTTGGGGAAAAAATTGCGTGACT
GCGTGAATTGAAAGTCAACTGGGGGGCCTCTTGTACCAAGCAAATACTTA
AAGTTTTCTTGTAGGATACGCCTGCTTTTGGGAATTGAATTTACAGTGGT
ATCTCCCTAGTTCAAACtagaatctttctgtaattcgaactaaaacactg
gtaattcgaagaaaagtcTTCGTTCCtggaagatcgaattagagagagtt
gactgtatatGTTTTGTAATATCTGCCGTTATGGATGCAAATATTCGATT
TTTGCGTAAGGAATCGCTCCTACAACTCGAACATAATTATAGTAATTAAG
TAACTTAACAAAGCATGAAAAAcctgtaaaaatgaagaagattaCCTTTC
TTCAGGGTGCGGTGGTCTTCACCAATTGTTAGTTCACTGTCACGATCAGT
ATANttttttttttttataacacaAAGGTTTTGTGATGGAGTTAACCATC
TGAAAGCTTTCCTGATTGGATCACGTCCATCAGGGAGAAGGGAGAGGCTC
CAGCTTTGGTCAGCACATTGCTCAATTGACTTTCGCCCTTGACCCATTTG
ATCGCAATCTCATTCTTTTTGATCATCTCACGTATGCAGTTGATTTCAAC
TCTGAGTCTTTTGTCACTCACAGCTGTCGAGGTTCCTGTAGATTCAAACA
AGGATCTACTGTCTTNTTATCAATTATTATTATGTCTGTAACGAAACAAT
GGATGATTAACAATCTCCCTCTTTCTTCTTTCGTTGGTCGAATATCGTAT
GTGTCTTCATCGTCGCATTGTTATCGTAGCTCGTAATCGTAATCGTAAAA
TTCGTATCGTAACGTAACGTAGTATAGCACGACTTTCACGTTTAAAACAT
AATTGTCATTGTTTGTTGAGTCGTCACGAATAAATAAACTTNGAGTTGAT
CGCACAACTCTTTTTACTTTGTTGGACGACCATGATATTGCAGTACATCT
GCCCATTACATCAGTGCAAAAGACGATGTGTCCTCCTCGGCTGTTACCGT
CATTTAGGTTGTTgaaacttgcatcagtgaacACTTTAATCTTCATGGAG
TTTAAGTCAAGTTTCGGTATTGTTAAGTATCCTGGTGTACtttggacaaa
ttttattgTCTTGTTGATCCGTTTGATATCATCCAAAGTTGCAGAGCCAA
TACGAGAGTATATTTCACTAACCGTGAAACTGATTTCTGGTCNGATCTTG
CTTAAGTCTCCATTTCCAATAAGTGTTTCTTTTGGATGTCATTTGATGTC
CATTTCCAATATGTCAGCGTACTGGACATAACTCAAAGTTGCAGAGCCAA
TACGAGAAGATATTTCACTAACCTAACCGTGAAACTGATTTCTGGTCTCG
TCATTCCTGCAACCCAGTTTAACCTTCCAATAGCTTGACGGATTTGTGAC
CTTTCAGCTTCATTAACAGGTTCTTGTTTCGTGAGGTTCTTCCTTTCTTG
AGCAAGACTAATGACTTCCAAATCCTTGACGTAAtcattttgatcaattt
tgatTGTACAATCGTCATTTTGCTGAAGGTGTACTCCAATGTACTTGAAA
TCGGTGTTGAACTCAGCTCCTATACTGAATGTCTCTTTCAGTTTGTCGAT
TATCTTGACAAATTGGTTGGCTCCTGCCCATAGGACATCATCGACAAAGC
AAGCCATGAGACCAAACAGCGTTGATCCATTGAACCAAAGAAAGATTCCT
TGGTCTAAAGAGACAGGCTTTCCTTTCAACTTGATCAATTCAGTTCGTAA
TTTCAAATACCAACTCCGGCTTGCATCAGCTAGGCCATAAACAGTTTTCC
GAAGTTTCCATAATTTGTTTGTACCAGCTTCTTTTGGAGGTTTTACATAG
AGATCCCTGTTGATGGATTCACCTTGTAAGAAAGCCGTCTTTACGTCAAG
TGAATGTAACGACCAAGAATGAGATACCAACATGAGTAGTGCTACTCGTA
ATCCTTCTTTGGAGCATGTTGGGCTATCTGTACGGAAGTCTTGGATTTCC
TCAAAGCCCCTAGCGACGAGTCTTGCCTTCACTGATGGTTGACCATTGAT
GACTTTTGGGGTAATAACCCATCTAAGGGACATTACACTTTGCCCAGTAT
TTTCAACCTCAAGATAAACATCTTGGGACTTCCAAGAAGTCAGTTCTTTT
TCTTTAGCATTTAACACCTCATTGTCATTACTCTGAAATAGGTTTGTTGA
GATTGATGTTTCACTATCGTCGTCGTCTTCAATCTCGATGTCCTTGATGC
TTTTGAAATTGACTGATTTCTTGGCTCCATCTGCAGTTTCAATGTTGAAC
CACCCGTCGTGCTTACCGCCGACCTTCCCAGCTTTTGATAGTATTTTTGC
ATTGACCCATtcgttgtttttattttggaagCGAATATTGATCTTATGTT
TTATCTTTACAGGGATCTGTGATGGTTTTCTTTGGGCAACCTTTCTGGTA
TGGCTGTTTGAGCTGTTTGATTGTATTCTATTTGTCTCATCATTGGTTGG
CGTGATTTGTGGTTGTGTGTTATTTTCAGAATCGACATCAGATTCATCAG
AGAACAAAGCATGGTTTTCTTGCATGTTATTGTTGATGGGAGTTGTAGTA
CTGTTGACATGATCAGTTGTTGTCTTTTCTTGTAGTCTATCACGATTGTT
GTCTTCCGACTGTTGAAATGAAGAATGAACCAGTTTTACTCGACAGGGAT
GTACTCTAACATAATAGCTGCTATGTTTGATTAGTACTTGTTGTCCATCT
TGTCCCAATACAATGCCGGGTCCATGCCATTCACTCGAGTCCTTTCGTTT
GTAGTACACCTGATCACCAGTAACATACTTCACATCACTTGAAGTACGGA
TGTTATGTGACAAGGCTCTTCTTATTCTTTCTGAATGTTCACTTTGGATG
AAGGCTTCCCTAGCCTTATGTAATGCATCAAGGTTCGTTTTGATCAACTT
TGTTGCTGGTTCACCAGATAAGGCAGGGGATTTGTCTGTGGTGACTGACA
GTAATCGTGGATTAGTTCCAATTGCCAATTGGTAGGAAGAGAATCCATGA
ACATTTGCTAGTGAATTTTTGGCATTGGTACACCAAGAAAGTGCCATGTC
GAAGCTACAGTCAGTGTCGTGTAGCACCTTATCCAACATGTTGGCAATAG
TGAGGTTGTGTCTTTCCACAATTCCATTGGACCAGGGTGATTCGGCAGCT
GTTGTTTTGATGGTGATTCCAAATTGCTCAGCAAGGTCCATGAAATCAGC
ATTGGCAAATTCACCTCCATTGTCGACTAAGAATTTTTCAGGTGTTCCAT
ACACTGAAATCCAAACTTTGAAGATGGCTTCTATGACTGTGTTTGGGTTT
TTGTTCTTGATAGTTGTAGCTGAAGACAATCTGGTGCACATGTCAATCAA
ATGGAGAATGATTTTGCTATCATAAAATTTCAGGTCCATAGCTACTGTTT
CTTGAAATTGGGTTGCCATTGGTAAGCCAACAATTGGCTTAGGTGGGGCC
TTTTGATACACTTGGCAGGTGGTACATTCAGCATCTACCTTTTTTAGTTC
TTCCTTTAGTTCGTGATTGTTGGACCATGGGATGCCTGCCTTATTAATTA
AGGATAGTAATTGTTTTAAGGAAGGGTGGGCAAACTGACGGTGAAGTTTG
ATAGCTATTTGCttgtttgtttgatttgttgtaGAGATAAATGTTATTCT
TGTATTCCGATCTTTCATAAGCAATTGTCTTGGTTTAGTTAGTGGAACGG
TGTAATGTCCACTGCTTGTAGTATTGAGTTTGATATTTTGGTTCATGGTT
GATACCACATCCTTTTGAAAATCAAGAACCATGTTTGCTCGCTTCATAAA
GGATCGTGACAGTAGGAGGGTTAGATCTTTTGATATTACATCAGTTTTGA
TTTGCACCTTTGTGATGCCAATGTACGCAGGAATACTGACACCTTGAGAA
GCTTGTACTTGATCACCAACACCNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTGTAATGTTTAACATCgttcttttcaatttcaggtAA
TGATGATAGATATTGTTTTAGCCATACTTCTCCACATACAGTTTTGCTTG
CACCACAGTCTAACAATCCACAGTTCCATGTTTCTGACACCAGGTTACGT
AGATTAACTTCAGAATCATCCACATTGTGAAGGATAATCTCATGGACAAC
ATAGGTTTCATTATTTGTGGAGTTGCCATCTGGGCATTCTTGTTGCCAGT
GGTTGATGCTATCACAAATTGAACATCTTGACACTCGACCAAACCGATCT
AATGGgtttttagctttttcatgAGCATTTCTTCTATCAGGCTTACTTGA
TTGTTCAATCCGATAGTTCGTTTTTCGAATGGCNCAAATTGAACATCTTG
ACACTCGACCAAACCGATCTAATGGgtttttagctttttcatgAACATTT
CTTCTATCAGGCTTACTTGATTGTTCAATCCGATAGTTGGTTTTTCGAAT
GGTTCCTCCTCTTGGCTTATTTTTATAGGTCTGGCGGTTTCTAGTATAGA
AggtattttcttcttcttcagaaGTGTTTTCTCCTTCGCTTTCTCTTCCA
TAAAATGTTGGCTCGCTCTTGACCTTTACTCCTGCAAAATCACTTTCTAA
GCCAGAGATTGAGTCATCAGCAAAcacttttacaagtttgtttctGACAT
CTTCATAATTCAAATCTGTGATGGTTGCTTTGATTAACTTTTCATGTGTT
GGTTCGAGGTTAGCAGTTTTGAGTAGGCGATAGGCAAGGAGATCTTGAGG
ATATTGGATGTAGTTCTTTATCTTGTGTAGTCGTTTGTCAAATTCAACAA
GGAATTCACGAATGGTGCTTTCCTTGACACGTTTGTATCCCTCGAATTTT
TCAATTGCGTTGAACTTCTCTGTAAGTTTGTCTTTTTCATAAATCTTGTC
AAGCCTTGTCAAGATTTGTTTAACCCCATTTTCGCCAGTAATTTCCTCTT
GTGACAATTCAAGGGCTGCTTCTTGCGCTTTTCCTTCAAGGGTCAATACC
AATGCTGGACCTTGTTTCTTCTTCTCAAGGGTTGTGAGCTCCGTCCAtat
attgattagtttcttccAATCACTATATGTTTTACTGGACGATAGCAAAG
GAGGAGCTTTGTTGTAAGATGTAGATGCCATTGTTCCTCTGCTACCatgt
aaaaatgaagaagataaCCTTTCTTCAGGGTGCGGTGGTCTTCACCAATT
GTTAGTTCACTGTCACGATCAGTATCATCAGTTATTGTCAGTAAGTCTTA
ACACGAATTAACACAACAGGTAAATGTACAGTTCATTCATTCACATAAAT
TAAAGCTCCTCCACAGCTGTTATTATTTGTTATCAATTATTATTATGTCT
GTAACGAAACAATGGATGATTAACAAAACATCTATTGAAGTTAATACAAT
AAACCGAGTAAAAAAAGATcaactacaggcaaaaattataAACTTAATTT
GTGGTCGTCAACTAAAACTATTcagcgaccgtagcatgaaggtagagcat
ccagctacggtgcgcaaggttgtgggtcaatccccagccgggtcatacca
aagatttccaaaatggtacttgatgcctctctgcttgatgctcagcaact
aaagaggcggatcaagggtaagtggagaaatccaagGAAAGGAGTGgggc
cctcccctaccttcgggtagacagctatacgaaaagggagccttcgggtc
gccctagactgcggtcgcaaacttacttacttaaactATTCAATACACTT
GATGCGAAGGTAATGCGGTTTTATTTGATTTATATTTTCTCTATTTCCTC
TATTTCTTCTATTTTCTCTTCACAGGAAATCTGCAAGTTGTCGAGTGCAG
TCATCCGTCTATACAATGATCTTTGGTGCTCTGGTAGCTGCAaggtatag
accttttcataaattacgttacgaacatcacttgcctcgttttgaaatta
ttgccatggtgattaactcccagcggattttataaaaactacttcctatt
cataaaaaaaatcatttaatgtctcaagagacatataATCACCATgttaa
ttgtttgaatacgaggcaagtgatgttcgttacgtaatttatgaaaaggt
ctattattatCAATTATTACTTAACGTGATGTCTTATTTTACAGAAAATT
ATTTGTGTTTCCTTTTTAATTGCCAATTACGGAACTTGCCATTAAAGATT
ACATGTGCAGCGGTGatggatataacaatttttaggagTTATCTACCGGG
CATGAAATTTTTGACAATGGGTTTATTGGAGGCGAAGAGAAAACTTTTCT
AATCATAAAATTGTACGGAATATGATTtctcgcttaccagaccccttttt
tgtttgaacgcggtcttgtatttgtacggtacaatatgaaatattGCATT
TTGAAATTGTTAATTTACCCTCCCCTCAGAAATATTTCACAAACcctgga
cactatatcctccaaccCATCCACTCCGCATTGTAGGAGTATTTCTCTGA
AGAAACTTTTTCACAGTACAGCTTAAAGCTTCTGCAAACTAATtggtagc
gagcacctcactagaAACCGGGGTTtctcatctcgtttcttagtgagttc
cactttgacgattttcgaaaaatagaactctttcaagtgctttgacgcaa
attcgatttttttgctactgcaagagcttcgatagcgagtacctcaccaa
aaaccgggatttttcatcccgtttcttagtgagttccactttgatgattt
tcgaaaaatagaagtctttcaagtgttttgacgcaaattcgatttttttg
atactgcaggagctttaaacgtttaaagtgacgtcaaaaaatcgaatgtt
tagagcccgaaaacctgggctcaaaacattcgaaaaagtcgcaaagtgga
ataggcgttacagcgtagaaaaaaagcggtgacgtctagtataggctaga
gcttcgaaagttaaaagtgacgtcaaaaaatcgaatgtttagacccgaaa
acctgggctcaaaacattcaaaaaagtcgcaaagtagaatagacgttaat
tgcgtagaaaaacgcgggtgacgtctagtatacgCTAACAATATAGCCGG
AAATATAAAGTTGGGTAATATTTCTGTCGGGGAAAAACTTCGTTGCTTTC
CCCCGTAACTCTCAGTCTTTGTCAATATTTTAACATGATTGATTTGTTTT
TAGTTCGGATTTGGTATTCGATTGGTATGGTTACGCATTGATTATGGGAA
ATAATGTTATGACCGCTGC

Coding sequence (CDS) from alignment at scaffold_478:255956..271874+

>TCONS_00067995 ID=TCONS_00067995|Name=TCONS_00067995|organism=Clytia hemisphaerica|type=CDS|length=495bp|location=Sequence derived from alignment at scaffold_478:255956..271874+ (Clytia hemisphaerica)
ATGATGGTCAGTCCAGTTCGTAAAGTTTCGACTGCGTTATTTTATGCAAC
ATCATCATTATTGATCGTGTTTGTTAATAAAATGGTATTGACAACGCACA
AATTCCCTTCTTATCAAGCTCTTGGAATCGGCCAGATGATAGCATCATTA
CTGGTGTTGGGAACAGCAAGGGCAAGTGGTATCATCACATTCCCTTCATT
CCAGCGAGACACTTTAAGAAAGATTTTCCCGTTACCACTGATATTCTTCC
TGAACTTGGTATGTGGGCTTGGAAGTACAAAAACTTTGAAtctACCAATG
TTTACAGTTTTGAGAAGATTTTCGATCCTTTTCACCATGTTGGCTGAATA
TGTATTACTGAGGAAATCTGCAAGTTGTCGAGTGCAGTCATCCGTCTATA
CAATGATCTTTGGTGCTCTGGTAGCTGCAagTTCGGATTTGGTATTCGAT
TGGTATGGTTACGCATTGATTATGGGAAATAATGTTATGACCGCT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_042459XLOC_042459Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067995-proteinTCONS_00067995-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00067995-exon-scaffold_478-1491911889:255956..256233TCONS_00067995-exon-scaffold_478-1491911889:255956..256233Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1510915933:255956..256233TCONS_00067995-exon-scaffold_478-1510915933:255956..256233Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1575043694:255956..256233TCONS_00067995-exon-scaffold_478-1575043694:255956..256233Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1491911889:257108..257249TCONS_00067995-exon-scaffold_478-1491911889:257108..257249Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1510915933:257108..257249TCONS_00067995-exon-scaffold_478-1510915933:257108..257249Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1575043694:257108..257249TCONS_00067995-exon-scaffold_478-1575043694:257108..257249Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1491911889:260538..260571TCONS_00067995-exon-scaffold_478-1491911889:260538..260571Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1510915933:260538..260571TCONS_00067995-exon-scaffold_478-1510915933:260538..260571Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1575043694:260538..260571TCONS_00067995-exon-scaffold_478-1575043694:260538..260571Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1491911889:262199..262285TCONS_00067995-exon-scaffold_478-1491911889:262199..262285Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1510915933:262199..262285TCONS_00067995-exon-scaffold_478-1510915933:262199..262285Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1575043694:262199..262285TCONS_00067995-exon-scaffold_478-1575043694:262199..262285Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1491911889:262959..263026TCONS_00067995-exon-scaffold_478-1491911889:262959..263026Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1510915933:262959..263026TCONS_00067995-exon-scaffold_478-1510915933:262959..263026Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1575043694:262959..263026TCONS_00067995-exon-scaffold_478-1575043694:262959..263026Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1491911889:264010..264081TCONS_00067995-exon-scaffold_478-1491911889:264010..264081Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1510915933:264010..264081TCONS_00067995-exon-scaffold_478-1510915933:264010..264081Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1575043694:264010..264081TCONS_00067995-exon-scaffold_478-1575043694:264010..264081Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1491911889:270431..270499TCONS_00067995-exon-scaffold_478-1491911889:270431..270499Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1510915933:270431..270499TCONS_00067995-exon-scaffold_478-1510915933:270431..270499Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1575043694:270431..270499TCONS_00067995-exon-scaffold_478-1575043694:270431..270499Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1491911889:271809..271874TCONS_00067995-exon-scaffold_478-1491911889:271809..271874Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1510915933:271809..271874TCONS_00067995-exon-scaffold_478-1510915933:271809..271874Clytia hemisphaericaexon
TCONS_00067995-exon-scaffold_478-1575043694:271809..271874TCONS_00067995-exon-scaffold_478-1575043694:271809..271874Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_478supercontigscaffold_478:255956..271874 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.16421	7.02412	6.08693	3.56195	10.089	7.16273	10.3698	13.0848	8.96252	15.4989	10.3652	8.49162	9.9005	6.57146	8.72827	9.77659	7.78954	10.132	5.6162	8.47275	8.86909	9.93142	14.304	13.7764	12.4878	14.6174	9.43337	6.12356	14.2718	13.7173
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR004853Sugar_P_trans_dom
Blast
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BLAST of TCONS_00067995 vs. Swiss-Prot (Human)
Match: S35D1 (UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter OS=Homo sapiens GN=SLC35D1 PE=2 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.574e-44
Identity = 90/158 (56.96%), Postives = 114/158 (72.15%), Query Frame = 2 
Query:  341 KVSTALFYATSSLLIVFVNKMVLTTHKFPSYQALGIGQMIASLLVLGTARASGIITFPSFQRDTLRKXXXXXXXXXXNLVCGLGSTKTLNLPMFTVLRRFSILFTMLAEYVLLRKSASCRVQSSVYTMIFGALVAASSDLVFDWYGYALIMGNNVMTA 814
            K+  A FY  SS LIV VNK VLT ++FPS   +G+GQM+A++ VL   +A  ++ FP   R+  RK FPLPL++F N + GL STK LNLPMFTVLRRFSILFTM AE VLL+K+ S  ++ +V+ MI GA VAASSDL FD  GYA I+ N+V+TA
Sbjct:   42 KLLAAGFYGVSSFLIVVVNKSVLTNYRFPSSLCVGLGQMVATVAVLWVGKALRVVKFPDLDRNVPRKTFPLPLLYFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLLKKTFSWGIKMTVFAMIIGAFVAASSDLAFDLEGYAFILINDVLTA 199
The following BLAST results are available for this feature:
BLAST of TCONS_00067995 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
S35D11.574e-4456.96UDP-glucuronic acid/UDP-N-acetylgalactosamine tran... [more]
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